RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 ABCA3Q99758 1704 aa14.59□□□□□ -0.07
GNE-202ENST00000396594 ZSCAN5BA6NJL1 495 aa14.59□□□□□ -0.07
GNE-202ENST00000396594 FAM227AF5H4B4 570 aa14.59□□□□□ -0.07
GNE-202ENST00000396594 CPNE6O95741 557 aa14.59□□□□□ -0.07
GNE-202ENST00000396594 SLC5A2P31639 672 aa14.59□□□□□ -0.07
GNE-202ENST00000396594 CD83Q01151 205 aa14.59□□□□□ -0.07
GNE-202ENST00000396594 GPR18Q14330 331 aa14.59□□□□□ -0.07
GNE-202ENST00000396594 ZNF542PQ5EBM4 170 aa14.59□□□□□ -0.07
GNE-202ENST00000396594 CSNK2A3Q8NEV1 391 aa14.59□□□□□ -0.07
GNE-202ENST00000396594 OR10Q1Q8NGQ4 319 aa14.59□□□□□ -0.07
GNE-202ENST00000396594 CASTOR1Q8WTX7 329 aa14.59□□□□□ -0.07
GNE-202ENST00000396594 BTF3L4Q96K17 158 aa14.59□□□□□ -0.07
GNE-202ENST00000396594 BMXP51813 675 aa14.59□□□□□ -0.07
GNE-202ENST00000396594 ZNF322Q6U7Q0 402 aaPredicted RBP14.59□□□□□ -0.07
GNE-202ENST00000396594 FAM198BQ6UWH4 519 aa14.59□□□□□ -0.07
GNE-202ENST00000396594 A0A087WZY1 265 aa14.59□□□□□ -0.07
GNE-202ENST00000396594 M0R3H8 397 aa14.59□□□□□ -0.07
GNE-202ENST00000396594 SULT1B1O43704 296 aa14.59□□□□□ -0.07
GNE-202ENST00000396594 GABRA5P31644 462 aa14.59□□□□□ -0.07
GNE-202ENST00000396594 SUMO3P55854 103 aaPredicted RBP14.59□□□□□ -0.07
GNE-202ENST00000396594 LNX2Q8N448 690 aa14.59□□□□□ -0.07
GNE-202ENST00000396594 ZFP90Q8TF47 636 aa14.59□□□□□ -0.07
GNE-202ENST00000396594 NUDT9Q9BW91 350 aa14.59□□□□□ -0.07
GNE-202ENST00000396594 KCNIP2Q9NS61 270 aa14.59□□□□□ -0.07
GNE-202ENST00000396594 PLEK2Q9NYT0 353 aa14.59□□□□□ -0.07
GNE-202ENST00000396594 GSKIPQ9P0R6 139 aa14.59□□□□□ -0.07
GNE-202ENST00000396594 CD8B2A6NJW9 211 aa14.58□□□□□ -0.07
GNE-202ENST00000396594 CD8BP10966 210 aa14.58□□□□□ -0.07
GNE-202ENST00000396594 IL32P24001 234 aa14.58□□□□□ -0.07
GNE-202ENST00000396594 BLOC1S1P78537 153 aa14.58□□□□□ -0.07
GNE-202ENST00000396594 C18orf21Q32NC0 220 aaPredicted RBP14.58□□□□□ -0.07
GNE-202ENST00000396594 ZMAT1Q5H9K5 638 aa14.58□□□□□ -0.07
GNE-202ENST00000396594 FAM71E1Q6IPT2 247 aa14.58□□□□□ -0.07
GNE-202ENST00000396594 CPEB3Q8NE35 698 aaKnown RBP14.58□□□□□ -0.07
GNE-202ENST00000396594 RLIMQ9NVW2 624 aa14.58□□□□□ -0.07
GNE-202ENST00000396594 ARRDC5A6NEK1 342 aa14.58□□□□□ -0.08
GNE-202ENST00000396594 AMY2AP04746 511 aa14.58□□□□□ -0.08
GNE-202ENST00000396594 RGRP47804 291 aa14.58□□□□□ -0.08
GNE-202ENST00000396594 FASLGP48023 281 aa14.58□□□□□ -0.08
GNE-202ENST00000396594 MLLT10P55197 1068 aa14.58□□□□□ -0.08
GNE-202ENST00000396594 CATR1Q13166 79 aa14.58□□□□□ -0.08
GNE-202ENST00000396594 BCL2A1Q16548 175 aa14.58□□□□□ -0.08
GNE-202ENST00000396594 TBRG1Q3YBR2 411 aa14.58□□□□□ -0.08
GNE-202ENST00000396594 RAB6CQ53S08 254 aa14.58□□□□□ -0.08
GNE-202ENST00000396594 ABHD17CQ6PCB6 329 aa14.58□□□□□ -0.08
GNE-202ENST00000396594 PODNL1Q6PEZ8 512 aa14.58□□□□□ -0.08
GNE-202ENST00000396594 ZNF566Q969W8 418 aa14.58□□□□□ -0.08
GNE-202ENST00000396594 RAB6CQ9H0N0 254 aa14.58□□□□□ -0.08
GNE-202ENST00000396594 PADI1Q9ULC6 663 aa14.58□□□□□ -0.08
GNE-202ENST00000396594 PPT2Q9UMR5 302 aa14.58□□□□□ -0.08
GNE-202ENST00000396594 GAPDHSO14556 408 aaPredicted RBP14.58□□□□□ -0.08
GNE-202ENST00000396594 ZNF749O43361 778 aa14.58□□□□□ -0.08
GNE-202ENST00000396594 SDC3O75056 442 aa14.58□□□□□ -0.08
GNE-202ENST00000396594 HTR3BO95264 441 aa14.58□□□□□ -0.08
GNE-202ENST00000396594 PRDX3P30048 256 aaKnown RBP14.58□□□□□ -0.08
GNE-202ENST00000396594 PTGS2P35354 604 aa14.58□□□□□ -0.08
GNE-202ENST00000396594 GPR3P46089 330 aa14.58□□□□□ -0.08
GNE-202ENST00000396594 TRA2AQ13595 282 aaKnown RBP eCLIP14.58□□□□□ -0.08
GNE-202ENST00000396594 LSMEM2Q8N112 164 aa14.58□□□□□ -0.08
GNE-202ENST00000396594 TMEM68Q96MH6 324 aa14.58□□□□□ -0.08
GNE-202ENST00000396594 C2orf72A6NCS6 295 aa14.58□□□□□ -0.08
GNE-202ENST00000396594 A8MVM7 634 aa14.58□□□□□ -0.08
GNE-202ENST00000396594 F5H0A9 414 aaPredicted RBP14.58□□□□□ -0.08
GNE-202ENST00000396594 OR7A17O14581 309 aa14.58□□□□□ -0.08
GNE-202ENST00000396594 LYRM1O43325 122 aa14.58□□□□□ -0.08
GNE-202ENST00000396594 LCKP06239 509 aa14.58□□□□□ -0.08
GNE-202ENST00000396594 HOXC4P09017 264 aaPredicted RBP14.58□□□□□ -0.08
GNE-202ENST00000396594 GPX2P18283 190 aa14.58□□□□□ -0.08
GNE-202ENST00000396594 CLDN2P57739 230 aa14.58□□□□□ -0.08
GNE-202ENST00000396594 NNATQ16517 81 aa14.58□□□□□ -0.08
GNE-202ENST00000396594 DEFB110Q30KQ9 67 aa14.58□□□□□ -0.08
GNE-202ENST00000396594 RNF165Q6ZSG1 346 aa14.58□□□□□ -0.08
GNE-202ENST00000396594 PGBD5Q8N414 524 aa14.58□□□□□ -0.08
GNE-202ENST00000396594 CLDN22Q8N7P3 220 aa14.58□□□□□ -0.08
GNE-202ENST00000396594 OR52N1Q8NH53 320 aa14.58□□□□□ -0.08
GNE-202ENST00000396594 THAP3Q8WTV1 239 aaPredicted RBP14.58□□□□□ -0.08
GNE-202ENST00000396594 MUTYHQ9UIF7 546 aa14.58□□□□□ -0.08
GNE-202ENST00000396594 TMEM265A0A087WTH1 108 aa14.57□□□□□ -0.08
GNE-202ENST00000396594 PRPH2P23942 346 aa14.57□□□□□ -0.08
GNE-202ENST00000396594 IL3RAP26951 378 aa14.57□□□□□ -0.08
GNE-202ENST00000396594 KIR2DL3P43628 341 aa14.57□□□□□ -0.08
GNE-202ENST00000396594 MTNR1BP49286 362 aa14.57□□□□□ -0.08
GNE-202ENST00000396594 RPL23AP62750 156 aaKnown RBP14.57□□□□□ -0.08
GNE-202ENST00000396594 PPP1R8Q12972 351 aaKnown RBP14.57□□□□□ -0.08
GNE-202ENST00000396594 DPPA2Q7Z7J5 298 aa14.57□□□□□ -0.08
GNE-202ENST00000396594 ASCC1Q8N9N2 400 aaKnown RBP14.57□□□□□ -0.08
GNE-202ENST00000396594 DMRTB1Q96MA1 342 aa14.57□□□□□ -0.08
GNE-202ENST00000396594 OR5B12Q96R08 314 aa14.57□□□□□ -0.08
GNE-202ENST00000396594 ULBP3Q9BZM4 244 aa14.57□□□□□ -0.08
GNE-202ENST00000396594 SLA2Q9H6Q3 261 aa14.57□□□□□ -0.08
GNE-202ENST00000396594 FBXO7Q9Y3I1 522 aa14.57□□□□□ -0.08
GNE-202ENST00000396594 PMS2P1A4D2B8 440 aa14.57□□□□□ -0.08
GNE-202ENST00000396594 HIDE1A8MVS5 230 aa14.57□□□□□ -0.08
GNE-202ENST00000396594 ZNF736B4DX44 427 aaPredicted RBP14.57□□□□□ -0.08
GNE-202ENST00000396594 TRAPPC2LH3BP13 241 aa14.57□□□□□ -0.08
GNE-202ENST00000396594 GABBR2O75899 941 aa14.57□□□□□ -0.08
GNE-202ENST00000396594 NFYAP23511 347 aaPredicted RBP14.57□□□□□ -0.08
GNE-202ENST00000396594 PBX2P40425 430 aa14.57□□□□□ -0.08
GNE-202ENST00000396594 ZNF92Q03936 586 aa14.57□□□□□ -0.08
GNE-202ENST00000396594 PIN1Q13526 163 aaPredicted RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms