RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 OR10A7Q8NGE5 316 aa4.34□□□□□ -1.71
GABPB1-204ENST00000396464 PNPLA2Q96AD5 504 aa4.34□□□□□ -1.71
GABPB1-204ENST00000396464 PPP1R14BQ96C90 147 aa4.34□□□□□ -1.71
GABPB1-204ENST00000396464 SERAC1Q96JX3 654 aa4.34□□□□□ -1.71
GABPB1-204ENST00000396464 C4orf45Q96LM5 186 aa4.34□□□□□ -1.71
GABPB1-204ENST00000396464 PPP1R36Q96LQ0 422 aa4.34□□□□□ -1.71
GABPB1-204ENST00000396464 MAPKAP1Q9BPZ7 522 aa4.34□□□□□ -1.71
GABPB1-204ENST00000396464 TMEM121Q9BTD3 319 aa4.34□□□□□ -1.71
GABPB1-204ENST00000396464 SLITRK2Q9H156 845 aa4.34□□□□□ -1.71
GABPB1-204ENST00000396464 GBA3Q9H227 469 aa4.34□□□□□ -1.71
GABPB1-204ENST00000396464 CPVLQ9H3G5 476 aa4.34□□□□□ -1.71
GABPB1-204ENST00000396464 ANKHQ9HCJ1 492 aa4.34□□□□□ -1.71
GABPB1-204ENST00000396464 DUS2Q9NX74 493 aaKnown RBP4.34□□□□□ -1.71
GABPB1-204ENST00000396464 CLEC2DQ9UHP7 191 aa4.34□□□□□ -1.71
GABPB1-204ENST00000396464 NUP50Q9UKX7 468 aa4.34□□□□□ -1.71
GABPB1-204ENST00000396464 MYO6Q9UM54 1294 aa4.34□□□□□ -1.71
GABPB1-204ENST00000396464 CFL2Q9Y281 166 aa4.34□□□□□ -1.71
GABPB1-204ENST00000396464 PLB1Q6P1J6 1458 aa4.34□□□□□ -1.71
GABPB1-204ENST00000396464 DNMBPQ6XZF7 1577 aa4.34□□□□□ -1.71
GABPB1-204ENST00000396464 AK9Q5TCS8 1911 aa4.34□□□□□ -1.71
GABPB1-204ENST00000396464 TAF1P21675 1872 aa4.33□□□□□ -1.72
GABPB1-204ENST00000396464 MRC2Q9UBG0 1479 aa4.33□□□□□ -1.72
GABPB1-204ENST00000396464 WRNQ14191 1432 aaPredicted RBP eCLIP4.33□□□□□ -1.72
GABPB1-204ENST00000396464 FRMPD4Q14CM0 1322 aa4.33□□□□□ -1.72
GABPB1-204ENST00000396464 TRBV9A0A0B4J1U6 114 aa4.33□□□□□ -1.72
GABPB1-204ENST00000396464 A0A0G2JLW4 131 aa4.33□□□□□ -1.72
GABPB1-204ENST00000396464 OR5K4A6NMS3 321 aa4.33□□□□□ -1.72
GABPB1-204ENST00000396464 LMO7DNF2Z398 122 aa4.33□□□□□ -1.72
GABPB1-204ENST00000396464 F5H6K3 240 aa4.33□□□□□ -1.72
GABPB1-204ENST00000396464 EPHB6O15197 1021 aa4.33□□□□□ -1.72
GABPB1-204ENST00000396464 EMC8O43402 210 aa4.33□□□□□ -1.72
GABPB1-204ENST00000396464 PSTPIP1O43586 416 aa4.33□□□□□ -1.72
GABPB1-204ENST00000396464 KIAA0513O60268 411 aa4.33□□□□□ -1.72
GABPB1-204ENST00000396464 WDR1O75083 606 aa4.33□□□□□ -1.72
GABPB1-204ENST00000396464 CNOT3O75175 753 aaKnown RBP4.33□□□□□ -1.72
GABPB1-204ENST00000396464 PSIP1O75475 530 aaKnown RBP4.33□□□□□ -1.72
GABPB1-204ENST00000396464 AP2A2O94973 939 aa4.33□□□□□ -1.72
GABPB1-204ENST00000396464 FARS2O95363 451 aaKnown RBP4.33□□□□□ -1.72
GABPB1-204ENST00000396464 LATS1O95835 1130 aa4.33□□□□□ -1.72
GABPB1-204ENST00000396464 IGHG3P01860 377 aa4.33□□□□□ -1.72
GABPB1-204ENST00000396464 TFAP2AP05549 437 aa4.33□□□□□ -1.72
GABPB1-204ENST00000396464 FGF2P09038 288 aa4.33□□□□□ -1.72
GABPB1-204ENST00000396464 PSKH1P11801 424 aa4.33□□□□□ -1.72
GABPB1-204ENST00000396464 ACVR1BP36896 505 aa4.33□□□□□ -1.72
GABPB1-204ENST00000396464 CEACAM3P40198 252 aa4.33□□□□□ -1.72
GABPB1-204ENST00000396464 CDKN2CP42773 168 aa4.33□□□□□ -1.72
GABPB1-204ENST00000396464 QARSP47897 775 aaKnown RBP4.33□□□□□ -1.72
GABPB1-204ENST00000396464 CCR8P51685 355 aa4.33□□□□□ -1.72
GABPB1-204ENST00000396464 MLF1P58340 268 aa4.33□□□□□ -1.72
GABPB1-204ENST00000396464 CHRNB3Q05901 458 aa4.33□□□□□ -1.72
GABPB1-204ENST00000396464 TRAF1Q13077 416 aa4.33□□□□□ -1.72
GABPB1-204ENST00000396464 STX5Q13190 355 aa4.33□□□□□ -1.72
GABPB1-204ENST00000396464 SERTAD2Q14140 314 aa4.33□□□□□ -1.72
GABPB1-204ENST00000396464 TSC22D1Q15714 1073 aa4.33□□□□□ -1.72
GABPB1-204ENST00000396464 EXOC3L4Q17RC7 722 aa4.33□□□□□ -1.72
GABPB1-204ENST00000396464 MS4A18Q3C1V0 323 aa4.33□□□□□ -1.72
GABPB1-204ENST00000396464 TMEM52BQ4KMG9 183 aa4.33□□□□□ -1.72
GABPB1-204ENST00000396464 DNAL1Q4LDG9 190 aa4.33□□□□□ -1.72
GABPB1-204ENST00000396464 SOHLH1Q5JUK2 328 aa4.33□□□□□ -1.72
GABPB1-204ENST00000396464 SAMD4BQ5PRF9 694 aaKnown RBP4.33□□□□□ -1.72
GABPB1-204ENST00000396464 KHDRBS2Q5VWX1 349 aaKnown RBP4.33□□□□□ -1.72
GABPB1-204ENST00000396464 STUMQ69YW2 141 aa4.33□□□□□ -1.72
GABPB1-204ENST00000396464 SFR1Q86XK3 245 aa4.33□□□□□ -1.72
GABPB1-204ENST00000396464 LINC01561Q8N1V8 128 aa4.33□□□□□ -1.72
GABPB1-204ENST00000396464 DHRSXQ8N5I4 330 aa4.33□□□□□ -1.72
GABPB1-204ENST00000396464 ARFGAP1Q8N6T3 406 aa4.33□□□□□ -1.72
GABPB1-204ENST00000396464 OR4F17Q8NGA8 305 aa4.33□□□□□ -1.72
GABPB1-204ENST00000396464 OR4F5Q8NH21 305 aa4.33□□□□□ -1.72
GABPB1-204ENST00000396464 PLPPR1Q8TBJ4 325 aa4.33□□□□□ -1.72
GABPB1-204ENST00000396464 ART4Q93070 314 aa4.33□□□□□ -1.72
GABPB1-204ENST00000396464 SARAFQ96BY9 339 aa4.33□□□□□ -1.72
GABPB1-204ENST00000396464 DUS3LQ96G46 650 aaKnown RBP4.33□□□□□ -1.72
GABPB1-204ENST00000396464 B3GALT6Q96L58 329 aa4.33□□□□□ -1.72
GABPB1-204ENST00000396464 ZNF778Q96MU6 729 aa4.33□□□□□ -1.72
GABPB1-204ENST00000396464 XPO6Q96QU8 1125 aaKnown RBP4.33□□□□□ -1.72
GABPB1-204ENST00000396464 OR4F4Q96R69 305 aa4.33□□□□□ -1.72
GABPB1-204ENST00000396464 CSF3RQ99062 836 aa4.33□□□□□ -1.72
GABPB1-204ENST00000396464 CNN2Q99439 309 aaKnown RBP4.33□□□□□ -1.72
GABPB1-204ENST00000396464 ECSITQ9BQ95 431 aa4.33□□□□□ -1.72
GABPB1-204ENST00000396464 COMMD4Q9H0A8 199 aa4.33□□□□□ -1.72
GABPB1-204ENST00000396464 PPA2Q9H2U2 334 aa4.33□□□□□ -1.72
GABPB1-204ENST00000396464 ASB8Q9H765 288 aa4.33□□□□□ -1.72
GABPB1-204ENST00000396464 NECAP2Q9NVZ3 263 aa4.33□□□□□ -1.72
GABPB1-204ENST00000396464 TMEM45AQ9NWC5 275 aa4.33□□□□□ -1.72
GABPB1-204ENST00000396464 PURGQ9UJV8 347 aaKnown RBP4.33□□□□□ -1.72
GABPB1-204ENST00000396464 NXT1Q9UKK6 140 aaKnown RBP4.33□□□□□ -1.72
GABPB1-204ENST00000396464 AK6Q9Y3D8 172 aaKnown RBP4.33□□□□□ -1.72
GABPB1-204ENST00000396464 WIPI2Q9Y4P8 454 aa4.33□□□□□ -1.72
GABPB1-204ENST00000396464 PTGDR2Q9Y5Y4 395 aa4.33□□□□□ -1.72
GABPB1-204ENST00000396464 BIVM-ERCC5R4GMW8 1640 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 THOC2Q8NI27 1593 aaKnown RBP4.32□□□□□ -1.72
GABPB1-204ENST00000396464 LRPPRCP42704 1394 aaKnown RBP4.32□□□□□ -1.72
GABPB1-204ENST00000396464 NPIPA5A0A0B4J1W7 369 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 ZCWPW2A0A1B0GU75 182 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 A0A1W2PRD5 423 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 ANHXE9PGG2 379 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 NPIPA5E9PKD4 350 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 SMIM22K7EJ46 135 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 SIRPB1O00241 398 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 RGS16O15492 202 aaPredicted RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms