RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 FAM153BP0C7A2 387 aa18.58■□□□□ 0.56
TRAF4-203ENST00000394925 IGHV4-31P0DP07 118 aa18.58■□□□□ 0.56
TRAF4-203ENST00000394925 CRHR1P34998 444 aa18.58■□□□□ 0.56
TRAF4-203ENST00000394925 RPL3P39023 403 aaKnown RBP18.58■□□□□ 0.56
TRAF4-203ENST00000394925 SESN3P58005 492 aa18.58■□□□□ 0.56
TRAF4-203ENST00000394925 CSNK2A1P68400 391 aaPredicted RBP18.58■□□□□ 0.56
TRAF4-203ENST00000394925 MERTKQ12866 999 aa18.58■□□□□ 0.56
TRAF4-203ENST00000394925 FAM153CQ494X1 144 aa18.58■□□□□ 0.56
TRAF4-203ENST00000394925 CNPY4Q8N129 248 aa18.58■□□□□ 0.56
TRAF4-203ENST00000394925 DEPDC4Q8N2C3 294 aa18.58■□□□□ 0.56
TRAF4-203ENST00000394925 ARIH2OSQ8N7S6 290 aa18.58■□□□□ 0.56
TRAF4-203ENST00000394925 OR5D16Q8NGK9 328 aa18.58■□□□□ 0.56
TRAF4-203ENST00000394925 PSMA8Q8TAA3 256 aa18.58■□□□□ 0.56
TRAF4-203ENST00000394925 C10orf105Q8TEF2 133 aa18.58■□□□□ 0.56
TRAF4-203ENST00000394925 APH1AQ96BI3 265 aa18.58■□□□□ 0.56
TRAF4-203ENST00000394925 SDF2Q99470 211 aa18.58■□□□□ 0.56
TRAF4-203ENST00000394925 GATA5Q9BWX5 397 aaPredicted RBP18.58■□□□□ 0.56
TRAF4-203ENST00000394925 C1QTNF6Q9BXI9 259 aa18.58■□□□□ 0.56
TRAF4-203ENST00000394925 LAT2Q9GZY6 243 aa18.58■□□□□ 0.56
TRAF4-203ENST00000394925 NOSIPQ9Y314 301 aaKnown RBP18.58■□□□□ 0.56
TRAF4-203ENST00000394925 TMEM233B4DJY2 109 aa18.57■□□□□ 0.56
TRAF4-203ENST00000394925 H7C417 338 aa18.57■□□□□ 0.56
TRAF4-203ENST00000394925 TFPIP10646 304 aa18.57■□□□□ 0.56
TRAF4-203ENST00000394925 SRSF2Q01130 221 aaKnown RBP18.57■□□□□ 0.56
TRAF4-203ENST00000394925 SKP2Q13309 424 aa18.57■□□□□ 0.56
TRAF4-203ENST00000394925 GPR68Q15743 365 aa18.57■□□□□ 0.56
TRAF4-203ENST00000394925 LSM12Q3MHD2 195 aaKnown RBP18.57■□□□□ 0.56
TRAF4-203ENST00000394925 SYT14P1Q58G82 188 aa18.57■□□□□ 0.56
TRAF4-203ENST00000394925 ABLIM2Q6H8Q1 611 aa18.57■□□□□ 0.56
TRAF4-203ENST00000394925 MTDHQ86UE4 582 aaKnown RBP18.57■□□□□ 0.56
TRAF4-203ENST00000394925 OR5AK3PQ8NH89 298 aa18.57■□□□□ 0.56
TRAF4-203ENST00000394925 TWIST2Q8WVJ9 160 aa18.57■□□□□ 0.56
TRAF4-203ENST00000394925 ST8SIA1Q92185 356 aa18.57■□□□□ 0.56
TRAF4-203ENST00000394925 DNAJA3Q96EY1 480 aa18.57■□□□□ 0.56
TRAF4-203ENST00000394925 ATP23Q9Y6H3 246 aa18.57■□□□□ 0.56
TRAF4-203ENST00000394925 IGKV3D-15A0A087WSY6 115 aa18.56■□□□□ 0.56
TRAF4-203ENST00000394925 COPEO14579 308 aa18.56■□□□□ 0.56
TRAF4-203ENST00000394925 PIP5K1BO14986 540 aa18.56■□□□□ 0.56
TRAF4-203ENST00000394925 CFLARO15519 480 aa18.56■□□□□ 0.56
TRAF4-203ENST00000394925 LMX1BO60663 402 aa18.56■□□□□ 0.56
TRAF4-203ENST00000394925 LY6HO94772 140 aa18.56■□□□□ 0.56
TRAF4-203ENST00000394925 USF1P22415 310 aaPredicted RBP18.56■□□□□ 0.56
TRAF4-203ENST00000394925 MAPK1P28482 360 aa18.56■□□□□ 0.56
TRAF4-203ENST00000394925 PTGR1Q14914 329 aa18.56■□□□□ 0.56
TRAF4-203ENST00000394925 ZNF544Q6NX49 715 aa18.56■□□□□ 0.56
TRAF4-203ENST00000394925 IFT20Q8IY31 132 aa18.56■□□□□ 0.56
TRAF4-203ENST00000394925 SFXN5Q8TD22 340 aa18.56■□□□□ 0.56
TRAF4-203ENST00000394925 PROX1Q92786 737 aa18.56■□□□□ 0.56
TRAF4-203ENST00000394925 INPP5KQ9BT40 448 aa18.56■□□□□ 0.56
TRAF4-203ENST00000394925 TRMOQ9BU70 441 aa18.56■□□□□ 0.56
TRAF4-203ENST00000394925 C19orf24Q9BVV8 132 aa18.56■□□□□ 0.56
TRAF4-203ENST00000394925 TXLNGYQ9BZA5 131 aa18.56■□□□□ 0.56
TRAF4-203ENST00000394925 NMUR2Q9GZQ4 415 aa18.56■□□□□ 0.56
TRAF4-203ENST00000394925 ATAD3AQ9NVI7 634 aa18.56■□□□□ 0.56
TRAF4-203ENST00000394925 ASB6Q9NWX5 421 aa18.56■□□□□ 0.56
TRAF4-203ENST00000394925 TAS2R16Q9NYV7 291 aa18.56■□□□□ 0.56
TRAF4-203ENST00000394925 KCNE5Q9UJ90 142 aa18.56■□□□□ 0.56
TRAF4-203ENST00000394925 CENPVL1A0A0U1RR11 272 aa18.55■□□□□ 0.56
TRAF4-203ENST00000394925 ZNF716A6NP11 495 aa18.55■□□□□ 0.56
TRAF4-203ENST00000394925 HAX1O00165 279 aa18.55■□□□□ 0.56
TRAF4-203ENST00000394925 DNAJA2O60884 412 aa18.55■□□□□ 0.56
TRAF4-203ENST00000394925 PEX11AO75192 247 aa18.55■□□□□ 0.56
TRAF4-203ENST00000394925 CSTAP01040 98 aa18.55■□□□□ 0.56
TRAF4-203ENST00000394925 UBTFL6P0CB48 400 aaPredicted RBP18.55■□□□□ 0.56
TRAF4-203ENST00000394925 NTF4P34130 210 aa18.55■□□□□ 0.56
TRAF4-203ENST00000394925 EFNA4P52798 201 aa18.55■□□□□ 0.56
TRAF4-203ENST00000394925 FOXG1P55316 489 aaPredicted RBP18.55■□□□□ 0.56
TRAF4-203ENST00000394925 RPS26P62854 115 aaKnown RBP18.55■□□□□ 0.56
TRAF4-203ENST00000394925 LSM11P83369 360 aaKnown RBP eCLIP18.55■□□□□ 0.56
TRAF4-203ENST00000394925 PCLAFQ15004 111 aa18.55■□□□□ 0.56
TRAF4-203ENST00000394925 PDK3Q15120 406 aa18.55■□□□□ 0.56
TRAF4-203ENST00000394925 IL17RELQ6ZVW7 336 aa18.55■□□□□ 0.56
TRAF4-203ENST00000394925 OLIG3Q7RTU3 272 aa18.55■□□□□ 0.56
TRAF4-203ENST00000394925 SLC25A43Q8WUT9 341 aaPredicted RBP18.55■□□□□ 0.56
TRAF4-203ENST00000394925 TMEM234Q8WY98 164 aa18.55■□□□□ 0.56
TRAF4-203ENST00000394925 MOAP1Q96BY2 351 aa18.55■□□□□ 0.56
TRAF4-203ENST00000394925 PPP3R2Q96LZ3 170 aa18.55■□□□□ 0.56
TRAF4-203ENST00000394925 C1orf50Q9BV19 199 aa18.55■□□□□ 0.56
TRAF4-203ENST00000394925 ACER3Q9NUN7 267 aa18.55■□□□□ 0.56
TRAF4-203ENST00000394925 TRAF6Q9Y4K3 522 aa18.55■□□□□ 0.56
TRAF4-203ENST00000394925 ARFGEF3Q5TH69 2177 aa18.54■□□□□ 0.56
TRAF4-203ENST00000394925 FCMRO60667 390 aa18.54■□□□□ 0.56
TRAF4-203ENST00000394925 TRIM13O60858 407 aa18.54■□□□□ 0.56
TRAF4-203ENST00000394925 CHRNGP07510 517 aa18.54■□□□□ 0.56
TRAF4-203ENST00000394925 CSF3P09919 207 aa18.54■□□□□ 0.56
TRAF4-203ENST00000394925 BMP4P12644 408 aa18.54■□□□□ 0.56
TRAF4-203ENST00000394925 SRD5A1P18405 259 aa18.54■□□□□ 0.56
TRAF4-203ENST00000394925 PGCP20142 388 aa18.54■□□□□ 0.56
TRAF4-203ENST00000394925 SOAT1P35610 550 aa18.54■□□□□ 0.56
TRAF4-203ENST00000394925 CHRNB3Q05901 458 aa18.54■□□□□ 0.56
TRAF4-203ENST00000394925 ZNF141Q15928 474 aa18.54■□□□□ 0.56
TRAF4-203ENST00000394925 GABRA6Q16445 453 aa18.54■□□□□ 0.56
TRAF4-203ENST00000394925 UGT3A2Q3SY77 523 aa18.54■□□□□ 0.56
TRAF4-203ENST00000394925 KRTCAP2Q8N6L1 136 aa18.54■□□□□ 0.56
TRAF4-203ENST00000394925 NATD1Q8N6N6 113 aa18.54■□□□□ 0.56
TRAF4-203ENST00000394925 COQ8BQ96D53 544 aa18.54■□□□□ 0.56
TRAF4-203ENST00000394925 ZHX1-C8orf76Q96EF9 292 aa18.54■□□□□ 0.56
TRAF4-203ENST00000394925 MUS81Q96NY9 551 aa18.54■□□□□ 0.56
TRAF4-203ENST00000394925 CHODLQ9H9P2 273 aa18.54■□□□□ 0.56
TRAF4-203ENST00000394925 MID2Q9UJV3 735 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms