RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 CDKN1AP38936 164 aa15.45■□□□□ 0.06
SNRPA1-202ENST00000394082 CLK1P49759 484 aaKnown RBP15.45■□□□□ 0.06
SNRPA1-202ENST00000394082 CCR4P51679 360 aa15.45■□□□□ 0.06
SNRPA1-202ENST00000394082 FBXW9Q5XUX1 488 aa15.45■□□□□ 0.06
SNRPA1-202ENST00000394082 ATG4DQ86TL0 474 aaPredicted RBP15.45■□□□□ 0.06
SNRPA1-202ENST00000394082 ZNF619Q8N2I2 560 aa15.45■□□□□ 0.06
SNRPA1-202ENST00000394082 ZNF433Q8N7K0 673 aaPredicted RBP15.45■□□□□ 0.06
SNRPA1-202ENST00000394082 OR5AK3PQ8NH89 298 aa15.45■□□□□ 0.06
SNRPA1-202ENST00000394082 RFWD2Q8NHY2 731 aa15.45■□□□□ 0.06
SNRPA1-202ENST00000394082 TCP10LQ8TDR4 215 aa15.45■□□□□ 0.06
SNRPA1-202ENST00000394082 TUBGCP3Q96CW5 907 aa15.45■□□□□ 0.06
SNRPA1-202ENST00000394082 ZNF300Q96RE9 604 aaPredicted RBP15.45■□□□□ 0.06
SNRPA1-202ENST00000394082 SERHL2Q9H4I8 314 aa15.45■□□□□ 0.06
SNRPA1-202ENST00000394082 EXD2Q9NVH0 621 aa15.45■□□□□ 0.06
SNRPA1-202ENST00000394082 SLC17A7Q9P2U7 560 aa15.45■□□□□ 0.06
SNRPA1-202ENST00000394082 SLC35A3Q9Y2D2 325 aa15.45■□□□□ 0.06
SNRPA1-202ENST00000394082 SULT2B1O00204 365 aa15.44■□□□□ 0.06
SNRPA1-202ENST00000394082 PMS2P2O95744 297 aa15.44■□□□□ 0.06
SNRPA1-202ENST00000394082 G6PDP11413 515 aa15.44■□□□□ 0.06
SNRPA1-202ENST00000394082 PTAFRP25105 342 aa15.44■□□□□ 0.06
SNRPA1-202ENST00000394082 PGM1P36871 562 aa15.44■□□□□ 0.06
SNRPA1-202ENST00000394082 RNF144AP50876 292 aaPredicted RBP15.44■□□□□ 0.06
SNRPA1-202ENST00000394082 SLC16A1P53985 500 aa15.44■□□□□ 0.06
SNRPA1-202ENST00000394082 MERTKQ12866 999 aa15.44■□□□□ 0.06
SNRPA1-202ENST00000394082 GPR68Q15743 365 aa15.44■□□□□ 0.06
SNRPA1-202ENST00000394082 AGAP6Q5VW22 663 aa15.44■□□□□ 0.06
SNRPA1-202ENST00000394082 ZCCHC23Q6ZST2 131 aa15.44■□□□□ 0.06
SNRPA1-202ENST00000394082 HIPK1Q86Z02 1210 aa15.44■□□□□ 0.06
SNRPA1-202ENST00000394082 ZNF100Q8IYN0 542 aa15.44■□□□□ 0.06
SNRPA1-202ENST00000394082 AGR3Q8TD06 166 aa15.44■□□□□ 0.06
SNRPA1-202ENST00000394082 HS6ST2Q96MM7 605 aa15.44■□□□□ 0.06
SNRPA1-202ENST00000394082 CCDC106Q9BWC9 280 aa15.44■□□□□ 0.06
SNRPA1-202ENST00000394082 ROPN1BQ9BZX4 212 aaPredicted RBP15.44■□□□□ 0.06
SNRPA1-202ENST00000394082 SAP130Q9H0E3 1048 aa15.44■□□□□ 0.06
SNRPA1-202ENST00000394082 ROPN1Q9HAT0 212 aaPredicted RBP15.44■□□□□ 0.06
SNRPA1-202ENST00000394082 HDGFL3Q9Y3E1 203 aa15.44■□□□□ 0.06
SNRPA1-202ENST00000394082 CR1P17927 2039 aa15.44■□□□□ 0.06
SNRPA1-202ENST00000394082 RTTNQ86VV8 2226 aa15.43■□□□□ 0.06
SNRPA1-202ENST00000394082 TLDC2A0PJX2 215 aa15.43■□□□□ 0.06
SNRPA1-202ENST00000394082 GPR171O14626 319 aa15.43■□□□□ 0.06
SNRPA1-202ENST00000394082 ABCD4O14678 606 aa15.43■□□□□ 0.06
SNRPA1-202ENST00000394082 KIAA0513O60268 411 aa15.43■□□□□ 0.06
SNRPA1-202ENST00000394082 RAMP1O60894 148 aa15.43■□□□□ 0.06
SNRPA1-202ENST00000394082 BPGMP07738 259 aa15.43■□□□□ 0.06
SNRPA1-202ENST00000394082 DSCR9P59020 149 aa15.43■□□□□ 0.06
SNRPA1-202ENST00000394082 STK11Q15831 433 aa15.43■□□□□ 0.06
SNRPA1-202ENST00000394082 PODNL1Q6PEZ8 512 aa15.43■□□□□ 0.06
SNRPA1-202ENST00000394082 TMEM108Q6UXF1 575 aa15.43■□□□□ 0.06
SNRPA1-202ENST00000394082 ZHX1-C8orf76Q96EF9 292 aa15.43■□□□□ 0.06
SNRPA1-202ENST00000394082 SLC35G5Q96KT7 338 aa15.43■□□□□ 0.06
SNRPA1-202ENST00000394082 QRSL1Q9H0R6 528 aaKnown RBP15.43■□□□□ 0.06
SNRPA1-202ENST00000394082 EXOSC3Q9NQT5 275 aaKnown RBP15.43■□□□□ 0.06
SNRPA1-202ENST00000394082 NPAP1Q9NZP6 1156 aa15.43■□□□□ 0.06
SNRPA1-202ENST00000394082 MALT1Q9UDY8 824 aa15.43■□□□□ 0.06
SNRPA1-202ENST00000394082 CHRNA9Q9UGM1 479 aa15.43■□□□□ 0.06
SNRPA1-202ENST00000394082 MKLN1Q9UL63 735 aa15.43■□□□□ 0.06
SNRPA1-202ENST00000394082 PCDHGB4Q9UN71 923 aa15.43■□□□□ 0.06
SNRPA1-202ENST00000394082 STAB1Q9NY15 2570 aa15.42■□□□□ 0.06
SNRPA1-202ENST00000394082 RNF103-CHMP3A0A140T963 221 aa15.42■□□□□ 0.06
SNRPA1-202ENST00000394082 ZNF716A6NP11 495 aa15.42■□□□□ 0.06
SNRPA1-202ENST00000394082 ADAM11O75078 769 aa15.42■□□□□ 0.06
SNRPA1-202ENST00000394082 SKAP2O75563 359 aaPredicted RBP15.42■□□□□ 0.06
SNRPA1-202ENST00000394082 SNUPNO95149 360 aaKnown RBP15.42■□□□□ 0.06
SNRPA1-202ENST00000394082 IFNA2P01563 188 aa15.42■□□□□ 0.06
SNRPA1-202ENST00000394082 UBTFL6P0CB48 400 aaPredicted RBP15.42■□□□□ 0.06
SNRPA1-202ENST00000394082 EDNRAP25101 427 aa15.42■□□□□ 0.06
SNRPA1-202ENST00000394082 SOAT1P35610 550 aa15.42■□□□□ 0.06
SNRPA1-202ENST00000394082 ETV4P43268 484 aa15.42■□□□□ 0.06
SNRPA1-202ENST00000394082 MAP2K6P52564 334 aa15.42■□□□□ 0.06
SNRPA1-202ENST00000394082 CDH11P55287 796 aa15.42■□□□□ 0.06
SNRPA1-202ENST00000394082 RPS26P62854 115 aaKnown RBP15.42■□□□□ 0.06
SNRPA1-202ENST00000394082 FAPQ12884 760 aa15.42■□□□□ 0.06
SNRPA1-202ENST00000394082 PGS1Q32NB8 556 aa15.42■□□□□ 0.06
SNRPA1-202ENST00000394082 ATAD3BQ5T9A4 648 aa15.42■□□□□ 0.06
SNRPA1-202ENST00000394082 OR7E24Q6IFN5 339 aa15.42■□□□□ 0.06
SNRPA1-202ENST00000394082 C16orf62Q7Z3J2 963 aa15.42■□□□□ 0.06
SNRPA1-202ENST00000394082 GRINAQ7Z429 371 aa15.42■□□□□ 0.06
SNRPA1-202ENST00000394082 LRRC34Q8IZ02 419 aa15.42■□□□□ 0.06
SNRPA1-202ENST00000394082 MAPK1IP1LQ8NDC0 245 aa15.42■□□□□ 0.06
SNRPA1-202ENST00000394082 PIGXQ8TBF5 258 aa15.42■□□□□ 0.06
SNRPA1-202ENST00000394082 ADAD1Q96M93 576 aaKnown RBP15.42■□□□□ 0.06
SNRPA1-202ENST00000394082 MUS81Q96NY9 551 aa15.42■□□□□ 0.06
SNRPA1-202ENST00000394082 TAS2R16Q9NYV7 291 aa15.42■□□□□ 0.06
SNRPA1-202ENST00000394082 PRDM4Q9UKN5 801 aa15.42■□□□□ 0.06
SNRPA1-202ENST00000394082 TRAPPC4Q9Y296 219 aa15.42■□□□□ 0.06
SNRPA1-202ENST00000394082 B3GALT5Q9Y2C3 310 aa15.42■□□□□ 0.06
SNRPA1-202ENST00000394082 CUBNO60494 3623 aa15.42■□□□□ 0.06
SNRPA1-202ENST00000394082 CENPVL1A0A0U1RR11 272 aa15.41■□□□□ 0.06
SNRPA1-202ENST00000394082 PRSS51A0A1B0GVH4 220 aa15.41■□□□□ 0.06
SNRPA1-202ENST00000394082 C9JVG2 144 aa15.41■□□□□ 0.06
SNRPA1-202ENST00000394082 SCN2BO60939 215 aa15.41■□□□□ 0.06
SNRPA1-202ENST00000394082 CYP7B1O75881 506 aa15.41■□□□□ 0.06
SNRPA1-202ENST00000394082 UQCRC2P22695 453 aa15.41■□□□□ 0.06
SNRPA1-202ENST00000394082 TTKP33981 857 aa15.41■□□□□ 0.06
SNRPA1-202ENST00000394082 H3F3AP84243 136 aa15.41■□□□□ 0.06
SNRPA1-202ENST00000394082 ANXA8L1Q5VT79 327 aa15.41■□□□□ 0.06
SNRPA1-202ENST00000394082 OR4F3Q6IEY1 312 aa15.41■□□□□ 0.06
SNRPA1-202ENST00000394082 TYW3Q6IPR3 259 aaKnown RBP15.41■□□□□ 0.06
SNRPA1-202ENST00000394082 C11orf71Q6IPW1 123 aa15.41■□□□□ 0.06
SNRPA1-202ENST00000394082 KLHL17Q6TDP4 642 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms