RNA–Protein interactions for RNA: ENST00000389993.7

PSME4-201, Transcript of proteasome activator subunit 4, humanhuman

TSL 1 (best)

Gene PSME4, Length 6,581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-201ENST00000389993 PHF7Q9BWX1 381 aaPredicted RBP13.55□□□□□ -0.24
PSME4-201ENST00000389993 CHRM4P08173 479 aa13.54□□□□□ -0.24
PSME4-201ENST00000389993 MAKP20794 623 aa13.54□□□□□ -0.24
PSME4-201ENST00000389993 TGFBR1P36897 503 aa13.54□□□□□ -0.24
PSME4-201ENST00000389993 HSD11B2P80365 405 aa13.54□□□□□ -0.24
PSME4-201ENST00000389993 KEAP1Q14145 624 aa13.54□□□□□ -0.24
PSME4-201ENST00000389993 FAM71E1Q6IPT2 247 aa13.54□□□□□ -0.24
PSME4-201ENST00000389993 ZNF440Q8IYI8 595 aa13.54□□□□□ -0.24
PSME4-201ENST00000389993 ACOT11Q8WXI4 607 aaPredicted RBP13.54□□□□□ -0.24
PSME4-201ENST00000389993 CNOT9Q92600 299 aaKnown RBP13.54□□□□□ -0.24
PSME4-201ENST00000389993 UBQLN4Q9NRR5 601 aa13.54□□□□□ -0.24
PSME4-201ENST00000389993 SLC6A13Q9NSD5 602 aa13.54□□□□□ -0.24
PSME4-201ENST00000389993 NRXN2Q9P2S2 1712 aa13.54□□□□□ -0.24
PSME4-201ENST00000389993 CASP8AP2Q9UKL3 1982 aa13.54□□□□□ -0.24
PSME4-201ENST00000389993 PRICKLE3O43900 615 aaPredicted RBP13.54□□□□□ -0.24
PSME4-201ENST00000389993 ATP6V1G1O75348 118 aa13.54□□□□□ -0.24
PSME4-201ENST00000389993 BMP4P12644 408 aa13.54□□□□□ -0.24
PSME4-201ENST00000389993 HOXA9P31269 272 aa13.54□□□□□ -0.24
PSME4-201ENST00000389993 GABARAPL2P60520 117 aa13.54□□□□□ -0.24
PSME4-201ENST00000389993 HERV-K104P61576 105 aa13.54□□□□□ -0.24
PSME4-201ENST00000389993 ACSM3Q53FZ2 586 aa13.54□□□□□ -0.24
PSME4-201ENST00000389993 SLC48A1Q6P1K1 146 aa13.54□□□□□ -0.24
PSME4-201ENST00000389993 ELP4Q96EB1 424 aa13.54□□□□□ -0.24
PSME4-201ENST00000389993 OR5M11Q96RB7 305 aa13.54□□□□□ -0.24
PSME4-201ENST00000389993 KIR3DX1Q9H7L2 352 aa13.54□□□□□ -0.24
PSME4-201ENST00000389993 PLAC1Q9HBJ0 212 aa13.54□□□□□ -0.24
PSME4-201ENST00000389993 TMEM9Q9P0T7 183 aa13.54□□□□□ -0.24
PSME4-201ENST00000389993 EEF1E1-BLOC1S5C9J1V9 151 aa13.54□□□□□ -0.24
PSME4-201ENST00000389993 ZNF195O14628 629 aa13.54□□□□□ -0.24
PSME4-201ENST00000389993 PGGHGQ32M88 737 aa13.54□□□□□ -0.24
PSME4-201ENST00000389993 RTL10Q7L3V2 364 aa13.54□□□□□ -0.24
PSME4-201ENST00000389993 TMEM150AQ86TG1 271 aa13.54□□□□□ -0.24
PSME4-201ENST00000389993 SYNPOQ8N3V7 929 aa13.54□□□□□ -0.24
PSME4-201ENST00000389993 ZNF845Q96IR2 970 aaPredicted RBP13.54□□□□□ -0.24
PSME4-201ENST00000389993 MMP17Q9ULZ9 603 aa13.54□□□□□ -0.24
PSME4-201ENST00000389993 GFYI3L273 518 aa13.54□□□□□ -0.24
PSME4-201ENST00000389993 FGF17O60258 216 aa13.54□□□□□ -0.24
PSME4-201ENST00000389993 TCN2P20062 427 aa13.54□□□□□ -0.24
PSME4-201ENST00000389993 ZNF81P51508 661 aa13.54□□□□□ -0.24
PSME4-201ENST00000389993 RPS25P62851 125 aaKnown RBP13.54□□□□□ -0.24
PSME4-201ENST00000389993 RAB11BQ15907 218 aa13.54□□□□□ -0.24
PSME4-201ENST00000389993 SH2D5Q6ZV89 423 aa13.54□□□□□ -0.24
PSME4-201ENST00000389993 ENTHD1Q8IYW4 607 aa13.54□□□□□ -0.24
PSME4-201ENST00000389993 ELP5Q8TE02 316 aa13.54□□□□□ -0.24
PSME4-201ENST00000389993 ACOT13Q9NPJ3 140 aa13.54□□□□□ -0.24
PSME4-201ENST00000389993 CCDC59Q9P031 241 aaKnown RBP13.54□□□□□ -0.24
PSME4-201ENST00000389993 NDUFAF4Q9P032 175 aa13.54□□□□□ -0.24
PSME4-201ENST00000389993 CD1CP29017 333 aa13.54□□□□□ -0.24
PSME4-201ENST00000389993 RSU1Q15404 277 aa13.54□□□□□ -0.24
PSME4-201ENST00000389993 XKRXQ6PP77 449 aa13.54□□□□□ -0.24
PSME4-201ENST00000389993 LAS2Q8IYD9 372 aa13.54□□□□□ -0.24
PSME4-201ENST00000389993 BEST4Q8NFU0 473 aa13.54□□□□□ -0.24
PSME4-201ENST00000389993 CSF3RQ99062 836 aa13.54□□□□□ -0.24
PSME4-201ENST00000389993 HOXD1Q9GZZ0 328 aa13.54□□□□□ -0.24
PSME4-201ENST00000389993 INIPQ9NRY2 104 aa13.54□□□□□ -0.24
PSME4-201ENST00000389993 SLC7A11Q9UPY5 501 aa13.54□□□□□ -0.24
PSME4-201ENST00000389993 ZNFX1Q9P2E3 1918 aaKnown RBP13.53□□□□□ -0.24
PSME4-201ENST00000389993 SLC19A2O60779 497 aa13.53□□□□□ -0.24
PSME4-201ENST00000389993 SEC14L2O76054 403 aa13.53□□□□□ -0.24
PSME4-201ENST00000389993 MPIG6BO95866 241 aa13.53□□□□□ -0.24
PSME4-201ENST00000389993 ELAVL4P26378 380 aaKnown RBP13.53□□□□□ -0.24
PSME4-201ENST00000389993 EPHA4P54764 986 aa13.53□□□□□ -0.24
PSME4-201ENST00000389993 DCDP81605 110 aaKnown RBP13.53□□□□□ -0.24
PSME4-201ENST00000389993 RBM39Q14498 530 aaKnown RBP13.53□□□□□ -0.24
PSME4-201ENST00000389993 OR5D18Q8NGL1 313 aa13.53□□□□□ -0.24
PSME4-201ENST00000389993 IFI44Q8TCB0 444 aa13.53□□□□□ -0.24
PSME4-201ENST00000389993 TUBA1CQ9BQE3 449 aa13.53□□□□□ -0.24
PSME4-201ENST00000389993 C1QTNF2Q9BXJ5 285 aa13.53□□□□□ -0.24
PSME4-201ENST00000389993 POLHQ9Y253 713 aa13.53□□□□□ -0.24
PSME4-201ENST00000389993 RHBDD3Q9Y3P4 386 aa13.53□□□□□ -0.24
PSME4-201ENST00000389993 ZNF638Q14966 1978 aaKnown RBP13.53□□□□□ -0.24
PSME4-201ENST00000389993 TMEM72A0PK05 275 aa13.53□□□□□ -0.24
PSME4-201ENST00000389993 IL32P24001 234 aa13.53□□□□□ -0.24
PSME4-201ENST00000389993 MAP2K3P46734 347 aa13.53□□□□□ -0.24
PSME4-201ENST00000389993 GDF7Q7Z4P5 450 aa13.53□□□□□ -0.24
PSME4-201ENST00000389993 TECPR1Q7Z6L1 1165 aa13.53□□□□□ -0.24
PSME4-201ENST00000389993 AMER3Q8N944 861 aa13.53□□□□□ -0.24
PSME4-201ENST00000389993 OR51T1Q8NGJ9 327 aa13.53□□□□□ -0.24
PSME4-201ENST00000389993 ISL2Q96A47 359 aa13.53□□□□□ -0.24
PSME4-201ENST00000389993 OR2S2Q9NQN1 319 aa13.53□□□□□ -0.24
PSME4-201ENST00000389993 MUTYHQ9UIF7 546 aa13.53□□□□□ -0.24
PSME4-201ENST00000389993 ZNF264O43296 627 aa13.53□□□□□ -0.24
PSME4-201ENST00000389993 KNG1P01042 644 aa13.53□□□□□ -0.24
PSME4-201ENST00000389993 GRK5P34947 590 aa13.53□□□□□ -0.24
PSME4-201ENST00000389993 CLDN17P56750 224 aa13.53□□□□□ -0.24
PSME4-201ENST00000389993 SLC14A1Q13336 389 aa13.53□□□□□ -0.24
PSME4-201ENST00000389993 NTRK2Q16620 822 aa13.53□□□□□ -0.24
PSME4-201ENST00000389993 XKR7Q5GH72 579 aa13.53□□□□□ -0.24
PSME4-201ENST00000389993 GPALPP1Q8IXQ4 340 aa13.53□□□□□ -0.24
PSME4-201ENST00000389993 OR7G2Q8NG99 324 aa13.53□□□□□ -0.24
PSME4-201ENST00000389993 TMEM163Q8TC26 289 aa13.53□□□□□ -0.24
PSME4-201ENST00000389993 ADAMTS18Q8TE60 1221 aa13.53□□□□□ -0.24
PSME4-201ENST00000389993 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.53□□□□□ -0.24
PSME4-201ENST00000389993 TSPAN10Q9H1Z9 355 aaPredicted RBP13.53□□□□□ -0.24
PSME4-201ENST00000389993 SLC6A15Q9H2J7 730 aa13.53□□□□□ -0.24
PSME4-201ENST00000389993 CDCP1Q9H5V8 836 aa13.53□□□□□ -0.24
PSME4-201ENST00000389993 KLHL42Q9P2K6 505 aa13.53□□□□□ -0.24
PSME4-201ENST00000389993 AP1M2Q9Y6Q5 423 aa13.53□□□□□ -0.24
PSME4-201ENST00000389993 WNK3Q9BYP7 1800 aa13.53□□□□□ -0.24
PSME4-201ENST00000389993 KANTRA0A1W2PQU2 76 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms