RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 INHBBP09529 407 aa23.07■■□□□ 1.28
SHOX2-201ENST00000389589 ABCD3P28288 659 aa23.07■■□□□ 1.28
SHOX2-201ENST00000389589 CCR4P51679 360 aa23.07■■□□□ 1.28
SHOX2-201ENST00000389589 ELOA3BQ3SY89 546 aa23.07■■□□□ 1.28
SHOX2-201ENST00000389589 ADCK1Q86TW2 530 aa23.07■■□□□ 1.28
SHOX2-201ENST00000389589 ATCAYQ86WG3 371 aa23.07■■□□□ 1.28
SHOX2-201ENST00000389589 KBTBD8Q8NFY9 601 aa23.07■■□□□ 1.28
SHOX2-201ENST00000389589 ELOA3Q8NG57 546 aa23.07■■□□□ 1.28
SHOX2-201ENST00000389589 OR51E2Q9H255 320 aa23.07■■□□□ 1.28
SHOX2-201ENST00000389589 SLC26A1Q9H2B4 701 aa23.07■■□□□ 1.28
SHOX2-201ENST00000389589 MCCC2Q9HCC0 563 aa23.07■■□□□ 1.28
SHOX2-201ENST00000389589 ALG1L2C9J202 215 aa23.07■■□□□ 1.28
SHOX2-201ENST00000389589 GNB5O14775 395 aa23.07■■□□□ 1.28
SHOX2-201ENST00000389589 NADKO95544 446 aaPredicted RBP23.07■■□□□ 1.28
SHOX2-201ENST00000389589 CYC1P08574 325 aa23.07■■□□□ 1.28
SHOX2-201ENST00000389589 EMP2P54851 167 aa23.07■■□□□ 1.28
SHOX2-201ENST00000389589 RNF4P78317 190 aa23.07■■□□□ 1.28
SHOX2-201ENST00000389589 CBLN3Q6UW01 205 aa23.07■■□□□ 1.28
SHOX2-201ENST00000389589 PRR23CQ6ZRP0 262 aa23.07■■□□□ 1.28
SHOX2-201ENST00000389589 OR9Q1Q8NGQ5 310 aa23.07■■□□□ 1.28
SHOX2-201ENST00000389589 TMEM43Q9BTV4 400 aa23.07■■□□□ 1.28
SHOX2-201ENST00000389589 APMAPQ9HDC9 416 aa23.07■■□□□ 1.28
SHOX2-201ENST00000389589 OSGIN1Q9UJX0 560 aa23.07■■□□□ 1.28
SHOX2-201ENST00000389589 PPIEQ9UNP9 301 aaKnown RBP23.07■■□□□ 1.28
SHOX2-201ENST00000389589 RIIAD1A6NNX1 92 aa23.06■■□□□ 1.28
SHOX2-201ENST00000389589 EIF4E2O60573 245 aaKnown RBP23.06■■□□□ 1.28
SHOX2-201ENST00000389589 LIMK1P53667 647 aa23.06■■□□□ 1.28
SHOX2-201ENST00000389589 WNT4P56705 351 aa23.06■■□□□ 1.28
SHOX2-201ENST00000389589 FHL1Q13642 323 aa23.06■■□□□ 1.28
SHOX2-201ENST00000389589 SSX1Q16384 188 aa23.06■■□□□ 1.28
SHOX2-201ENST00000389589 ARMC4Q5T2S8 1044 aa23.06■■□□□ 1.28
SHOX2-201ENST00000389589 PLBD1Q6P4A8 553 aa23.06■■□□□ 1.28
SHOX2-201ENST00000389589 PAQR6Q6TCH4 344 aa23.06■■□□□ 1.28
SHOX2-201ENST00000389589 ATG4DQ86TL0 474 aaPredicted RBP23.06■■□□□ 1.28
SHOX2-201ENST00000389589 CROCCP3Q8IVE0 287 aa23.06■■□□□ 1.28
SHOX2-201ENST00000389589 NFAM1Q8NET5 270 aaPredicted RBP23.06■■□□□ 1.28
SHOX2-201ENST00000389589 BBS1Q8NFJ9 593 aa23.06■■□□□ 1.28
SHOX2-201ENST00000389589 VMP1Q96GC9 406 aa23.06■■□□□ 1.28
SHOX2-201ENST00000389589 C12orf10Q9HB07 376 aa23.06■■□□□ 1.28
SHOX2-201ENST00000389589 ISYNA1Q9NPH2 558 aa23.06■■□□□ 1.28
SHOX2-201ENST00000389589 LOC100506127A0A0U1RQW1 187 aa23.05■■□□□ 1.28
SHOX2-201ENST00000389589 NDUFB2O95178 105 aa23.05■■□□□ 1.28
SHOX2-201ENST00000389589 SP9P0CG40 484 aa23.05■■□□□ 1.28
SHOX2-201ENST00000389589 PEPDP12955 493 aa23.05■■□□□ 1.28
SHOX2-201ENST00000389589 HK1P19367 917 aa23.05■■□□□ 1.28
SHOX2-201ENST00000389589 NRG3P56975 720 aa23.05■■□□□ 1.28
SHOX2-201ENST00000389589 TMED1Q13445 227 aa23.05■■□□□ 1.28
SHOX2-201ENST00000389589 ZNF829Q3KNS6 432 aaPredicted RBP23.05■■□□□ 1.28
SHOX2-201ENST00000389589 SLC35F1Q5T1Q4 408 aa23.05■■□□□ 1.28
SHOX2-201ENST00000389589 ARHGAP11AQ6P4F7 1023 aa23.05■■□□□ 1.28
SHOX2-201ENST00000389589 AGBL5Q8NDL9 886 aa23.05■■□□□ 1.28
SHOX2-201ENST00000389589 CHCHD6Q9BRQ6 235 aa23.05■■□□□ 1.28
SHOX2-201ENST00000389589 TBL1XR1Q9BZK7 514 aa23.05■■□□□ 1.28
SHOX2-201ENST00000389589 ZBTB20Q9HC78 741 aaPredicted RBP23.05■■□□□ 1.28
SHOX2-201ENST00000389589 MPDZO75970 2070 aa23.05■■□□□ 1.28
SHOX2-201ENST00000389589 IGHV3-20A0A0C4DH32 117 aa23.05■■□□□ 1.28
SHOX2-201ENST00000389589 CPNE3O75131 537 aaKnown RBP23.05■■□□□ 1.28
SHOX2-201ENST00000389589 ZNF883P0CG24 379 aa23.05■■□□□ 1.28
SHOX2-201ENST00000389589 ZFP36L1Q07352 338 aaKnown RBP23.05■■□□□ 1.28
SHOX2-201ENST00000389589 DOC2BQ14184 412 aa23.05■■□□□ 1.28
SHOX2-201ENST00000389589 NIPAL3Q6P499 406 aa23.05■■□□□ 1.28
SHOX2-201ENST00000389589 GDPGP1Q6ZNW5 385 aa23.05■■□□□ 1.28
SHOX2-201ENST00000389589 MEPCEQ7L2J0 689 aaKnown RBP23.05■■□□□ 1.28
SHOX2-201ENST00000389589 PSD4Q8NDX1 1056 aa23.05■■□□□ 1.28
SHOX2-201ENST00000389589 OTULINQ96BN8 352 aa23.05■■□□□ 1.28
SHOX2-201ENST00000389589 JAM3Q9BX67 310 aa23.05■■□□□ 1.28
SHOX2-201ENST00000389589 ZNF337Q9Y3M9 751 aa23.05■■□□□ 1.28
SHOX2-201ENST00000389589 EXPH5Q8NEV8 1989 aa23.04■■□□□ 1.28
SHOX2-201ENST00000389589 PRR23D1E9PI22 279 aaPredicted RBP23.04■■□□□ 1.28
SHOX2-201ENST00000389589 SOCS6O14544 535 aa23.04■■□□□ 1.28
SHOX2-201ENST00000389589 NDUFB5O43674 189 aa23.04■■□□□ 1.28
SHOX2-201ENST00000389589 PRR23D2P0DMB1 279 aaPredicted RBP23.04■■□□□ 1.28
SHOX2-201ENST00000389589 LPAL2Q16609 132 aa23.04■■□□□ 1.28
SHOX2-201ENST00000389589 APCDD1LQ8NCL9 501 aa23.04■■□□□ 1.28
SHOX2-201ENST00000389589 BORCS5Q969J3 196 aa23.04■■□□□ 1.28
SHOX2-201ENST00000389589 LRFN5Q96NI6 719 aa23.04■■□□□ 1.28
SHOX2-201ENST00000389589 SEC14L4Q9UDX3 406 aa23.04■■□□□ 1.28
SHOX2-201ENST00000389589 OR6C70A6NIJ9 312 aa23.04■■□□□ 1.28
SHOX2-201ENST00000389589 FAM183AA6NL82 134 aa23.04■■□□□ 1.28
SHOX2-201ENST00000389589 MEN1O00255 615 aa23.04■■□□□ 1.28
SHOX2-201ENST00000389589 OR7A10O76100 309 aa23.04■■□□□ 1.28
SHOX2-201ENST00000389589 APOL3O95236 402 aa23.04■■□□□ 1.28
SHOX2-201ENST00000389589 PPP1R3DO95685 299 aa23.04■■□□□ 1.28
SHOX2-201ENST00000389589 IFNGP01579 166 aa23.04■■□□□ 1.28
SHOX2-201ENST00000389589 ZNF3P17036 446 aa23.04■■□□□ 1.28
SHOX2-201ENST00000389589 ATP6V1E1P36543 226 aa23.04■■□□□ 1.28
SHOX2-201ENST00000389589 SLC1A3P43003 542 aa23.04■■□□□ 1.28
SHOX2-201ENST00000389589 GRK6P43250 576 aa23.04■■□□□ 1.28
SHOX2-201ENST00000389589 FOXL2P58012 376 aa23.04■■□□□ 1.28
SHOX2-201ENST00000389589 ZNF117Q03924 483 aa23.04■■□□□ 1.28
SHOX2-201ENST00000389589 LSRQ86X29 649 aaPredicted RBP23.04■■□□□ 1.28
SHOX2-201ENST00000389589 ZNF563Q8TA94 476 aa23.04■■□□□ 1.28
SHOX2-201ENST00000389589 NUBPLQ8TB37 319 aa23.04■■□□□ 1.28
SHOX2-201ENST00000389589 NDUFB11Q9NX14 153 aa23.04■■□□□ 1.28
SHOX2-201ENST00000389589 IGHA1P01876 353 aa23.03■■□□□ 1.28
SHOX2-201ENST00000389589 GP1BAP07359 652 aa23.03■■□□□ 1.28
SHOX2-201ENST00000389589 LIMS3P0CW19 117 aa23.03■■□□□ 1.28
SHOX2-201ENST00000389589 LIMS4P0CW20 117 aa23.03■■□□□ 1.28
SHOX2-201ENST00000389589 PAICSP22234 425 aaKnown RBP23.03■■□□□ 1.28
SHOX2-201ENST00000389589 NOS3P29474 1203 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms