RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 UBA52P62987 128 aaKnown RBP13.6□□□□□ -0.23
VPS9D1-201ENST00000389386 OLFML2AQ68BL7 652 aa13.6□□□□□ -0.23
VPS9D1-201ENST00000389386 CPOQ8IVL8 374 aa13.6□□□□□ -0.23
VPS9D1-201ENST00000389386 ARMC10Q8N2F6 343 aa13.6□□□□□ -0.23
VPS9D1-201ENST00000389386 C17orf47Q8NEP4 570 aa13.6□□□□□ -0.23
VPS9D1-201ENST00000389386 ELP5Q8TE02 316 aa13.6□□□□□ -0.23
VPS9D1-201ENST00000389386 MYLIPQ8WY64 445 aa13.6□□□□□ -0.23
VPS9D1-201ENST00000389386 PRRC1Q96M27 445 aa13.6□□□□□ -0.23
VPS9D1-201ENST00000389386 ZNF558Q96NG5 402 aa13.6□□□□□ -0.23
VPS9D1-201ENST00000389386 OR51M1Q9H341 326 aa13.6□□□□□ -0.23
VPS9D1-201ENST00000389386 PIGMQ9H3S5 423 aa13.6□□□□□ -0.23
VPS9D1-201ENST00000389386 HINT3Q9NQE9 182 aaKnown RBP13.6□□□□□ -0.23
VPS9D1-201ENST00000389386 MRPL17Q9NRX2 175 aaKnown RBP13.6□□□□□ -0.23
VPS9D1-201ENST00000389386 MED17Q9NVC6 651 aa13.6□□□□□ -0.23
VPS9D1-201ENST00000389386 H2AFY2Q9P0M6 372 aaPredicted RBP13.6□□□□□ -0.23
VPS9D1-201ENST00000389386 KLK11Q9UBX7 282 aa13.6□□□□□ -0.23
VPS9D1-201ENST00000389386 INSL5Q9Y5Q6 135 aa13.6□□□□□ -0.23
VPS9D1-201ENST00000389386 F5H5P2 479 aa13.59□□□□□ -0.23
VPS9D1-201ENST00000389386 GABARAPH6UMI1 98 aa13.59□□□□□ -0.23
VPS9D1-201ENST00000389386 SCAMP1O15126 338 aa13.59□□□□□ -0.23
VPS9D1-201ENST00000389386 NDUFB6O95139 128 aa13.59□□□□□ -0.23
VPS9D1-201ENST00000389386 S100A8P05109 93 aa13.59□□□□□ -0.23
VPS9D1-201ENST00000389386 KLK1P06870 262 aa13.59□□□□□ -0.23
VPS9D1-201ENST00000389386 IL3P08700 152 aa13.59□□□□□ -0.23
VPS9D1-201ENST00000389386 VSIG10L2P0DP72 767 aa13.59□□□□□ -0.23
VPS9D1-201ENST00000389386 MGMTP16455 207 aa13.59□□□□□ -0.23
VPS9D1-201ENST00000389386 ACHEP22303 614 aa13.59□□□□□ -0.23
VPS9D1-201ENST00000389386 GABRR2P28476 465 aa13.59□□□□□ -0.23
VPS9D1-201ENST00000389386 MAT2AP31153 395 aaKnown RBP13.59□□□□□ -0.23
VPS9D1-201ENST00000389386 STAT5AP42229 794 aa13.59□□□□□ -0.23
VPS9D1-201ENST00000389386 ART1P52961 327 aa13.59□□□□□ -0.23
VPS9D1-201ENST00000389386 UBE2IP63279 158 aaKnown RBP13.59□□□□□ -0.23
VPS9D1-201ENST00000389386 KRT33BQ14525 404 aa13.59□□□□□ -0.23
VPS9D1-201ENST00000389386 SYPL1Q16563 259 aa13.59□□□□□ -0.23
VPS9D1-201ENST00000389386 PLEKHS1Q5SXH7 462 aa13.59□□□□□ -0.23
VPS9D1-201ENST00000389386 DCAF12L2Q5VW00 463 aa13.59□□□□□ -0.23
VPS9D1-201ENST00000389386 MED27Q6P2C8 311 aa13.59□□□□□ -0.23
VPS9D1-201ENST00000389386 FAM83HQ6ZRV2 1179 aaPredicted RBP13.59□□□□□ -0.23
VPS9D1-201ENST00000389386 PGAP1Q75T13 922 aa13.59□□□□□ -0.23
VPS9D1-201ENST00000389386 C6orf120Q7Z4R8 191 aa13.59□□□□□ -0.23
VPS9D1-201ENST00000389386 C12orf40Q86WS4 652 aa13.59□□□□□ -0.23
VPS9D1-201ENST00000389386 EDARADDQ8WWZ3 215 aa13.59□□□□□ -0.23
VPS9D1-201ENST00000389386 TRAV1-2A0A0B4J238 106 aa13.59□□□□□ -0.23
VPS9D1-201ENST00000389386 ZNF749O43361 778 aa13.59□□□□□ -0.23
VPS9D1-201ENST00000389386 AKR7A3O95154 331 aa13.59□□□□□ -0.23
VPS9D1-201ENST00000389386 TGFB1P01137 390 aa13.59□□□□□ -0.23
VPS9D1-201ENST00000389386 ADCYAP1P18509 176 aa13.59□□□□□ -0.23
VPS9D1-201ENST00000389386 SGCAQ16586 387 aa13.59□□□□□ -0.23
VPS9D1-201ENST00000389386 LRRC73Q5JTD7 316 aa13.59□□□□□ -0.23
VPS9D1-201ENST00000389386 ZDHHC20Q5W0Z9 365 aa13.59□□□□□ -0.23
VPS9D1-201ENST00000389386 FAAP20Q6NZ36 180 aa13.59□□□□□ -0.23
VPS9D1-201ENST00000389386 SERPINA13PQ6UXR4 307 aa13.59□□□□□ -0.23
VPS9D1-201ENST00000389386 SPRED2Q7Z698 418 aa13.59□□□□□ -0.23
VPS9D1-201ENST00000389386 JAZF1Q86VZ6 243 aa13.59□□□□□ -0.23
VPS9D1-201ENST00000389386 SPAG16Q8N0X2 631 aa13.59□□□□□ -0.23
VPS9D1-201ENST00000389386 SLC39A11Q8N1S5 342 aa13.59□□□□□ -0.23
VPS9D1-201ENST00000389386 ASZ1Q8WWH4 475 aa13.59□□□□□ -0.23
VPS9D1-201ENST00000389386 OSTF1Q92882 214 aa13.59□□□□□ -0.23
VPS9D1-201ENST00000389386 ZNF689Q96CS4 500 aaPredicted RBP13.59□□□□□ -0.23
VPS9D1-201ENST00000389386 FAM46AQ96IP4 442 aaKnown RBP13.59□□□□□ -0.23
VPS9D1-201ENST00000389386 STOX2Q9P2F5 926 aaPredicted RBP13.59□□□□□ -0.23
VPS9D1-201ENST00000389386 COL4A6Q14031 1691 aa13.58□□□□□ -0.23
VPS9D1-201ENST00000389386 IGLV3-16A0A075B6K0 115 aa13.58□□□□□ -0.24
VPS9D1-201ENST00000389386 ANKRD20A5PA0PJZ0 165 aa13.58□□□□□ -0.24
VPS9D1-201ENST00000389386 FAM183AA6NL82 134 aa13.58□□□□□ -0.24
VPS9D1-201ENST00000389386 KRT33AO76009 404 aa13.58□□□□□ -0.24
VPS9D1-201ENST00000389386 NTN1O95631 604 aa13.58□□□□□ -0.24
VPS9D1-201ENST00000389386 S100PP25815 95 aa13.58□□□□□ -0.24
VPS9D1-201ENST00000389386 AHRP35869 848 aa13.58□□□□□ -0.24
VPS9D1-201ENST00000389386 IFNGR2P38484 337 aa13.58□□□□□ -0.24
VPS9D1-201ENST00000389386 STARP49675 285 aa13.58□□□□□ -0.24
VPS9D1-201ENST00000389386 SNRPEP62304 92 aaKnown RBP13.58□□□□□ -0.24
VPS9D1-201ENST00000389386 SNTB1Q13884 538 aaKnown RBP13.58□□□□□ -0.24
VPS9D1-201ENST00000389386 PGGHGQ32M88 737 aa13.58□□□□□ -0.24
VPS9D1-201ENST00000389386 UBE2NLQ5JXB2 153 aa13.58□□□□□ -0.24
VPS9D1-201ENST00000389386 SLCO4C1Q6ZQN7 724 aa13.58□□□□□ -0.24
VPS9D1-201ENST00000389386 GAREM2Q75VX8 874 aa13.58□□□□□ -0.24
VPS9D1-201ENST00000389386 SLC36A1Q7Z2H8 476 aa13.58□□□□□ -0.24
VPS9D1-201ENST00000389386 BOLLQ8N9W6 283 aaKnown RBP13.58□□□□□ -0.24
VPS9D1-201ENST00000389386 OR5D16Q8NGK9 328 aa13.58□□□□□ -0.24
VPS9D1-201ENST00000389386 THAP6Q8TBB0 222 aa13.58□□□□□ -0.24
VPS9D1-201ENST00000389386 LGALS14Q8TCE9 139 aa13.58□□□□□ -0.24
VPS9D1-201ENST00000389386 RXFP4Q8TDU9 374 aa13.58□□□□□ -0.24
VPS9D1-201ENST00000389386 KLHL9Q9P2J3 617 aa13.58□□□□□ -0.24
VPS9D1-201ENST00000389386 MIOXQ9UGB7 285 aa13.58□□□□□ -0.24
VPS9D1-201ENST00000389386 EFCAB7A8K855 629 aa13.58□□□□□ -0.24
VPS9D1-201ENST00000389386 KHDRBS3O75525 346 aaKnown RBP13.58□□□□□ -0.24
VPS9D1-201ENST00000389386 ACVR1BP36896 505 aa13.58□□□□□ -0.24
VPS9D1-201ENST00000389386 EPHB3P54753 998 aa13.58□□□□□ -0.24
VPS9D1-201ENST00000389386 PRR5P85299 388 aa13.58□□□□□ -0.24
VPS9D1-201ENST00000389386 CCSMST1Q4G0I0 132 aa13.58□□□□□ -0.24
VPS9D1-201ENST00000389386 CHST9Q7L1S5 443 aa13.58□□□□□ -0.24
VPS9D1-201ENST00000389386 BRIX1Q8TDN6 353 aaKnown RBP13.58□□□□□ -0.24
VPS9D1-201ENST00000389386 NEIL2Q969S2 332 aa13.58□□□□□ -0.24
VPS9D1-201ENST00000389386 PGLYRP3Q96LB9 341 aa13.58□□□□□ -0.24
VPS9D1-201ENST00000389386 IL21Q9HBE4 155 aa13.58□□□□□ -0.24
VPS9D1-201ENST00000389386 IL23AQ9NPF7 189 aa13.58□□□□□ -0.24
VPS9D1-201ENST00000389386 MIEF1Q9NQG6 463 aa13.58□□□□□ -0.24
VPS9D1-201ENST00000389386 ZFP57Q9NU63 452 aa13.58□□□□□ -0.24
VPS9D1-201ENST00000389386 TRBV23-1A0A0A0MS06 115 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms