RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 ACSS3Q9H6R3 686 aa15.08■□□□□ 0
HMGN1-203ENST00000380748 DCTN4Q9UJW0 460 aa15.08■□□□□ 0
HMGN1-203ENST00000380748 WBP11Q9Y2W2 641 aaKnown RBP15.08■□□□□ 0
HMGN1-203ENST00000380748 VWFP04275 2813 aa15.08■□□□□ 0
HMGN1-203ENST00000380748 IGHV1-18A0A0C4DH31 117 aa15.07■□□□□ 0
HMGN1-203ENST00000380748 A0A0G2JK05 382 aa15.07■□□□□ 0
HMGN1-203ENST00000380748 TRIM77I1YAP6 450 aa15.07■□□□□ 0
HMGN1-203ENST00000380748 OR4A8P0C604 315 aa15.07■□□□□ 0
HMGN1-203ENST00000380748 EFNA1P20827 205 aaPredicted RBP15.07■□□□□ 0
HMGN1-203ENST00000380748 PKNOX1P55347 436 aa15.07■□□□□ 0
HMGN1-203ENST00000380748 CAV1Q03135 178 aa15.07■□□□□ 0
HMGN1-203ENST00000380748 LCP2Q13094 533 aa15.07■□□□□ 0
HMGN1-203ENST00000380748 SYT14P1Q58G82 188 aa15.07■□□□□ 0
HMGN1-203ENST00000380748 ZCCHC12Q6PEW1 402 aa15.07■□□□□ 0
HMGN1-203ENST00000380748 VHLLQ6RSH7 139 aa15.07■□□□□ 0
HMGN1-203ENST00000380748 THSD4Q6ZMP0 1018 aa15.07■□□□□ 0
HMGN1-203ENST00000380748 GLCCI1Q86VQ1 547 aa15.07■□□□□ 0
HMGN1-203ENST00000380748 ZCCHC24Q8N2G6 241 aaKnown RBP15.07■□□□□ 0
HMGN1-203ENST00000380748 FAM76AQ8TAV0 307 aa15.07■□□□□ 0
HMGN1-203ENST00000380748 RBM4Q9BWF3 364 aaKnown RBP15.07■□□□□ 0
HMGN1-203ENST00000380748 RAB1BQ9H0U4 201 aa15.07■□□□□ 0
HMGN1-203ENST00000380748 ZNF696Q9H7X3 374 aa15.07■□□□□ 0
HMGN1-203ENST00000380748 DUSP22Q9NRW4 184 aa15.07■□□□□ 0
HMGN1-203ENST00000380748 SLC7A10Q9NS82 523 aa15.07■□□□□ 0
HMGN1-203ENST00000380748 PCDHB10Q9UN67 800 aa15.07■□□□□ 0
HMGN1-203ENST00000380748 CMYA5Q8N3K9 4069 aa15.06■□□□□ 0
HMGN1-203ENST00000380748 CCDC151A5D8V7 595 aa15.06■□□□□ 0
HMGN1-203ENST00000380748 SERINC4A6NH21 518 aa15.06■□□□□ 0
HMGN1-203ENST00000380748 NPIPB9F8W1W9 429 aa15.06■□□□□ 0
HMGN1-203ENST00000380748 GPR171O14626 319 aa15.06■□□□□ 0
HMGN1-203ENST00000380748 KLF11O14901 512 aa15.06■□□□□ 0
HMGN1-203ENST00000380748 ZNF264O43296 627 aa15.06■□□□□ 0
HMGN1-203ENST00000380748 PRPS1P60891 318 aa15.06■□□□□ 0
HMGN1-203ENST00000380748 MERTKQ12866 999 aa15.06■□□□□ 0
HMGN1-203ENST00000380748 RIN1Q13671 783 aa15.06■□□□□ 0
HMGN1-203ENST00000380748 CBFBQ13951 182 aa15.06■□□□□ 0
HMGN1-203ENST00000380748 LASP1Q14847 261 aaKnown RBP15.06■□□□□ 0
HMGN1-203ENST00000380748 EFNB3Q15768 340 aa15.06■□□□□ 0
HMGN1-203ENST00000380748 CCDC103Q8IW40 242 aa15.06■□□□□ 0
HMGN1-203ENST00000380748 SVOPLQ8N434 492 aa15.06■□□□□ 0
HMGN1-203ENST00000380748 ARL8AQ96BM9 186 aa15.06■□□□□ 0
HMGN1-203ENST00000380748 FAM120BQ96EK7 910 aaKnown RBP15.06■□□□□ 0
HMGN1-203ENST00000380748 STACQ99469 402 aa15.06■□□□□ 0
HMGN1-203ENST00000380748 HOXD1Q9GZZ0 328 aa15.06■□□□□ 0
HMGN1-203ENST00000380748 IQCGQ9H095 443 aaKnown RBP15.06■□□□□ 0
HMGN1-203ENST00000380748 PIGUQ9H490 435 aa15.06■□□□□ 0
HMGN1-203ENST00000380748 UPB1Q9UBR1 384 aa15.06■□□□□ 0
HMGN1-203ENST00000380748 STK38LQ9Y2H1 464 aa15.06■□□□□ 0
HMGN1-203ENST00000380748 DTNAQ9Y4J8 743 aa15.06■□□□□ 0
HMGN1-203ENST00000380748 PCDHGB1Q9Y5G3 927 aa15.06■□□□□ 0
HMGN1-203ENST00000380748 KCNE3Q9Y6H6 103 aa15.06■□□□□ 0
HMGN1-203ENST00000380748 B4DSR2 109 aa15.05■□□□□ -0
HMGN1-203ENST00000380748 NPIPB8E9PQR5 432 aa15.05■□□□□ -0
HMGN1-203ENST00000380748 ZSCAN12O43309 604 aa15.05■□□□□ -0
HMGN1-203ENST00000380748 AKAP10O43572 662 aa15.05■□□□□ -0
HMGN1-203ENST00000380748 PDE5AO76074 875 aa15.05■□□□□ -0
HMGN1-203ENST00000380748 HMGN2P05204 90 aaKnown RBP15.05■□□□□ -0
HMGN1-203ENST00000380748 INHBAP08476 426 aa15.05■□□□□ -0
HMGN1-203ENST00000380748 TFPIP10646 304 aa15.05■□□□□ -0
HMGN1-203ENST00000380748 UBL4AP11441 157 aa15.05■□□□□ -0
HMGN1-203ENST00000380748 IFNGR1P15260 489 aa15.05■□□□□ -0
HMGN1-203ENST00000380748 TAC1P20366 129 aa15.05■□□□□ -0
HMGN1-203ENST00000380748 IMPDH1P20839 514 aa15.05■□□□□ -0
HMGN1-203ENST00000380748 FRKP42685 505 aaPredicted RBP15.05■□□□□ -0
HMGN1-203ENST00000380748 ARFIP2P53365 341 aa15.05■□□□□ -0
HMGN1-203ENST00000380748 SLC16A1P53985 500 aa15.05■□□□□ -0
HMGN1-203ENST00000380748 ATP12AP54707 1039 aa15.05■□□□□ -0
HMGN1-203ENST00000380748 SESN3P58005 492 aa15.05■□□□□ -0
HMGN1-203ENST00000380748 C2orf54Q08AI8 447 aa15.05■□□□□ -0
HMGN1-203ENST00000380748 HIKESHIQ53FT3 197 aa15.05■□□□□ -0
HMGN1-203ENST00000380748 DCST2Q5T1A1 773 aa15.05■□□□□ -0
HMGN1-203ENST00000380748 TSPO2Q5TGU0 170 aa15.05■□□□□ -0
HMGN1-203ENST00000380748 SHQ1Q6PI26 577 aaKnown RBP15.05■□□□□ -0
HMGN1-203ENST00000380748 KLHL24Q6TFL4 600 aa15.05■□□□□ -0
HMGN1-203ENST00000380748 UGT2A3Q6UWM9 527 aa15.05■□□□□ -0
HMGN1-203ENST00000380748 LSRQ86X29 649 aaPredicted RBP15.05■□□□□ -0
HMGN1-203ENST00000380748 ZNF786Q8N393 782 aa15.05■□□□□ -0
HMGN1-203ENST00000380748 PIGXQ8TBF5 258 aa15.05■□□□□ -0
HMGN1-203ENST00000380748 PPCDCQ96CD2 204 aa15.05■□□□□ -0
HMGN1-203ENST00000380748 NAPGQ99747 312 aaPredicted RBP15.05■□□□□ -0
HMGN1-203ENST00000380748 THUMPD3Q9BV44 507 aaKnown RBP15.05■□□□□ -0
HMGN1-203ENST00000380748 SAP130Q9H0E3 1048 aa15.05■□□□□ -0
HMGN1-203ENST00000380748 LPAR2Q9HBW0 351 aa15.05■□□□□ -0
HMGN1-203ENST00000380748 MID1IP1Q9NPA3 183 aa15.05■□□□□ -0
HMGN1-203ENST00000380748 SERINC1Q9NRX5 453 aa15.05■□□□□ -0
HMGN1-203ENST00000380748 SIRT3Q9NTG7 399 aaPredicted RBP15.05■□□□□ -0
HMGN1-203ENST00000380748 ZCCHC3Q9NUD5 404 aaKnown RBP15.05■□□□□ -0
HMGN1-203ENST00000380748 UTP11Q9Y3A2 253 aaKnown RBP15.05■□□□□ -0
HMGN1-203ENST00000380748 SPEF1Q9Y4P9 236 aa15.05■□□□□ -0
HMGN1-203ENST00000380748 TRIM49D1C9J1S8 452 aa15.04■□□□□ -0
HMGN1-203ENST00000380748 LYNX1G3V0Z9 82 aa15.04■□□□□ -0
HMGN1-203ENST00000380748 EIF4E2O60573 245 aaKnown RBP15.04■□□□□ -0
HMGN1-203ENST00000380748 RSL1D1O76021 490 aaKnown RBP15.04■□□□□ -0
HMGN1-203ENST00000380748 WNT11O96014 354 aa15.04■□□□□ -0
HMGN1-203ENST00000380748 LYNX1P0DP58 116 aa15.04■□□□□ -0
HMGN1-203ENST00000380748 CDH2P19022 906 aaPredicted RBP15.04■□□□□ -0
HMGN1-203ENST00000380748 TGFBR3Q03167 851 aa15.04■□□□□ -0
HMGN1-203ENST00000380748 SCGB2A2Q13296 93 aa15.04■□□□□ -0
HMGN1-203ENST00000380748 SKP2Q13309 424 aa15.04■□□□□ -0
HMGN1-203ENST00000380748 USP43Q70EL4 1123 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms