RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 ADIPOR2Q86V24 386 aa16■□□□□ 0.15
MCF2L-203ENST00000375604 ATOH8Q96SQ7 321 aa16■□□□□ 0.15
MCF2L-203ENST00000375604 CHMP24386 653 aa16■□□□□ 0.15
MCF2L-203ENST00000375604 TNFRSF17Q02223 184 aa16■□□□□ 0.15
MCF2L-203ENST00000375604 ELP2Q6IA86 826 aa16■□□□□ 0.15
MCF2L-203ENST00000375604 DEFB123Q8N688 67 aa16■□□□□ 0.15
MCF2L-203ENST00000375604 ULBP2Q9BZM5 246 aa16■□□□□ 0.15
MCF2L-203ENST00000375604 CDCP1Q9H5V8 836 aa16■□□□□ 0.15
MCF2L-203ENST00000375604 OR6C2Q9NZP2 312 aa16■□□□□ 0.15
MCF2L-203ENST00000375604 ARGFXA6NJG6 315 aa16■□□□□ 0.15
MCF2L-203ENST00000375604 ZNF749O43361 778 aa16■□□□□ 0.15
MCF2L-203ENST00000375604 MEPEQ9NQ76 525 aaPredicted RBP16■□□□□ 0.15
MCF2L-203ENST00000375604 GOLGA4Q13439 2230 aaKnown RBP16■□□□□ 0.15
MCF2L-203ENST00000375604 TMEM269A0A1B0GVZ9 245 aa15.99■□□□□ 0.15
MCF2L-203ENST00000375604 CASC3O15234 703 aaKnown RBP15.99■□□□□ 0.15
MCF2L-203ENST00000375604 CD46P15529 392 aa15.99■□□□□ 0.15
MCF2L-203ENST00000375604 GABRB3P28472 473 aa15.99■□□□□ 0.15
MCF2L-203ENST00000375604 AFF3P51826 1226 aaKnown RBP15.99■□□□□ 0.15
MCF2L-203ENST00000375604 MRPS21P82921 87 aaKnown RBP15.99■□□□□ 0.15
MCF2L-203ENST00000375604 PKDCCQ504Y2 493 aa15.99■□□□□ 0.15
MCF2L-203ENST00000375604 BEST4Q8NFU0 473 aa15.99■□□□□ 0.15
MCF2L-203ENST00000375604 TESQ9UGI8 421 aaKnown RBP15.99■□□□□ 0.15
MCF2L-203ENST00000375604 H3BUI4 141 aa15.99■□□□□ 0.15
MCF2L-203ENST00000375604 ZNF593O00488 134 aaPredicted RBP15.99■□□□□ 0.15
MCF2L-203ENST00000375604 SLC5A2P31639 672 aa15.99■□□□□ 0.15
MCF2L-203ENST00000375604 BCL6P41182 706 aa15.99■□□□□ 0.15
MCF2L-203ENST00000375604 HTR2BP41595 481 aa15.99■□□□□ 0.15
MCF2L-203ENST00000375604 DCDP81605 110 aaKnown RBP15.99■□□□□ 0.15
MCF2L-203ENST00000375604 NFATC3Q12968 1075 aa15.99■□□□□ 0.15
MCF2L-203ENST00000375604 ZNF585AQ6P3V2 769 aa15.99■□□□□ 0.15
MCF2L-203ENST00000375604 DCP2Q8IU60 420 aaKnown RBP15.99■□□□□ 0.15
MCF2L-203ENST00000375604 SULT4A1Q9BR01 284 aa15.99■□□□□ 0.15
MCF2L-203ENST00000375604 C1QTNF2Q9BXJ5 285 aa15.99■□□□□ 0.15
MCF2L-203ENST00000375604 MFRPQ9BY79 579 aa15.99■□□□□ 0.15
MCF2L-203ENST00000375604 INTS6Q9UL03 887 aaKnown RBP15.99■□□□□ 0.15
MCF2L-203ENST00000375604 TMEM184BQ9Y519 407 aaPredicted RBP15.99■□□□□ 0.15
MCF2L-203ENST00000375604 EDIL3O43854 480 aa15.99■□□□□ 0.15
MCF2L-203ENST00000375604 MGAT3Q09327 533 aa15.99■□□□□ 0.15
MCF2L-203ENST00000375604 SERPINA11Q86U17 422 aa15.99■□□□□ 0.15
MCF2L-203ENST00000375604 ARPC1BO15143 372 aaKnown RBP15.99■□□□□ 0.15
MCF2L-203ENST00000375604 ARPC5O15511 151 aa15.99■□□□□ 0.15
MCF2L-203ENST00000375604 GPR75O95800 540 aa15.99■□□□□ 0.15
MCF2L-203ENST00000375604 ZNF14P17017 642 aaPredicted RBP15.99■□□□□ 0.15
MCF2L-203ENST00000375604 PRDX1Q06830 199 aaKnown RBP15.99■□□□□ 0.15
MCF2L-203ENST00000375604 ESPNLQ6ZVH7 1005 aa15.99■□□□□ 0.15
MCF2L-203ENST00000375604 TMEM255BQ8WV15 326 aa15.99■□□□□ 0.15
MCF2L-203ENST00000375604 SLC39A13Q96H72 371 aa15.99■□□□□ 0.15
MCF2L-203ENST00000375604 ZNF696Q9H7X3 374 aa15.99■□□□□ 0.15
MCF2L-203ENST00000375604 UBQLN4Q9NRR5 601 aa15.99■□□□□ 0.15
MCF2L-203ENST00000375604 SRPK3Q9UPE1 567 aa15.99■□□□□ 0.15
MCF2L-203ENST00000375604 HHLA1C9JL84 531 aa15.99■□□□□ 0.15
MCF2L-203ENST00000375604 H3BMQ9 156 aa15.99■□□□□ 0.15
MCF2L-203ENST00000375604 CA5AP35218 305 aa15.99■□□□□ 0.15
MCF2L-203ENST00000375604 MED25Q71SY5 747 aa15.99■□□□□ 0.15
MCF2L-203ENST00000375604 MEPCEQ7L2J0 689 aaKnown RBP15.99■□□□□ 0.15
MCF2L-203ENST00000375604 ANKRD13BQ86YJ7 626 aa15.99■□□□□ 0.15
MCF2L-203ENST00000375604 EDAQ92838 391 aa15.99■□□□□ 0.15
MCF2L-203ENST00000375604 COG8Q96MW5 612 aa15.99■□□□□ 0.15
MCF2L-203ENST00000375604 NOSIPQ9Y314 301 aaKnown RBP15.99■□□□□ 0.15
MCF2L-203ENST00000375604 TAPBPO15533 448 aa15.98■□□□□ 0.15
MCF2L-203ENST00000375604 RPA2P15927 270 aa15.98■□□□□ 0.15
MCF2L-203ENST00000375604 PRSS3P35030 304 aa15.98■□□□□ 0.15
MCF2L-203ENST00000375604 ZNF322Q6U7Q0 402 aaPredicted RBP15.98■□□□□ 0.15
MCF2L-203ENST00000375604 TSNAXQ99598 290 aaKnown RBP15.98■□□□□ 0.15
MCF2L-203ENST00000375604 TIMM8AO60220 97 aaPredicted RBP15.98■□□□□ 0.15
MCF2L-203ENST00000375604 GPR148Q8TDV2 347 aa15.98■□□□□ 0.15
MCF2L-203ENST00000375604 ZNF578Q96N58 590 aaPredicted RBP15.98■□□□□ 0.15
MCF2L-203ENST00000375604 PHB2Q99623 299 aa15.98■□□□□ 0.15
MCF2L-203ENST00000375604 ZNF223Q9UK11 482 aaPredicted RBP15.98■□□□□ 0.15
MCF2L-203ENST00000375604 HMGB3O15347 200 aaKnown RBP15.98■□□□□ 0.15
MCF2L-203ENST00000375604 SSR4P51571 173 aa15.98■□□□□ 0.15
MCF2L-203ENST00000375604 PLAG1Q6DJT9 500 aa15.98■□□□□ 0.15
MCF2L-203ENST00000375604 C7orf50Q9BRJ6 194 aaKnown RBP15.98■□□□□ 0.15
MCF2L-203ENST00000375604 WDR83Q9BRX9 315 aaKnown RBP15.98■□□□□ 0.15
MCF2L-203ENST00000375604 ACOT13Q9NPJ3 140 aa15.98■□□□□ 0.15
MCF2L-203ENST00000375604 TUSC2O75896 110 aa15.98■□□□□ 0.15
MCF2L-203ENST00000375604 UTS2O95399 124 aa15.98■□□□□ 0.15
MCF2L-203ENST00000375604 FCGR2AP12318 317 aa15.98■□□□□ 0.15
MCF2L-203ENST00000375604 BMP2P12643 396 aa15.98■□□□□ 0.15
MCF2L-203ENST00000375604 CST5P28325 142 aaPredicted RBP15.98■□□□□ 0.15
MCF2L-203ENST00000375604 ZNF136P52737 540 aa15.98■□□□□ 0.15
MCF2L-203ENST00000375604 RAB38P57729 211 aa15.98■□□□□ 0.15
MCF2L-203ENST00000375604 ERVK-16P61578 105 aa15.98■□□□□ 0.15
MCF2L-203ENST00000375604 SLC16A14Q7RTX9 510 aa15.98■□□□□ 0.15
MCF2L-203ENST00000375604 ADGRG5Q8IZF4 528 aa15.98■□□□□ 0.15
MCF2L-203ENST00000375604 UTP23Q9BRU9 249 aaKnown RBP15.98■□□□□ 0.15
MCF2L-203ENST00000375604 SYT11Q9BT88 431 aa15.98■□□□□ 0.15
MCF2L-203ENST00000375604 RAB3DO95716 219 aa15.98■□□□□ 0.15
MCF2L-203ENST00000375604 APOC3P02656 99 aa15.98■□□□□ 0.15
MCF2L-203ENST00000375604 ALDOBP05062 364 aa15.98■□□□□ 0.15
MCF2L-203ENST00000375604 RETP07949 1114 aa15.98■□□□□ 0.15
MCF2L-203ENST00000375604 KCNJ10P78508 379 aa15.98■□□□□ 0.15
MCF2L-203ENST00000375604 TLDC1Q6P9B6 456 aa15.98■□□□□ 0.15
MCF2L-203ENST00000375604 GLB1L2Q8IW92 636 aa15.98■□□□□ 0.15
MCF2L-203ENST00000375604 TNFRSF13CQ96RJ3 184 aa15.98■□□□□ 0.15
MCF2L-203ENST00000375604 HCAR1Q9BXC0 346 aa15.98■□□□□ 0.15
MCF2L-203ENST00000375604 BET1O15155 118 aa15.97■□□□□ 0.15
MCF2L-203ENST00000375604 ARHGEF15O94989 841 aa15.97■□□□□ 0.15
MCF2L-203ENST00000375604 IGHG1P01857 330 aa15.97■□□□□ 0.15
MCF2L-203ENST00000375604 DHRS4L1P0CG22 281 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms