RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 HLA-BQ31612 363 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 CTXN3Q4LDR2 81 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 SAXO2Q658L1 398 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 NANOGP1Q8N7R0 232 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 OR14L1PQ8NHC6 308 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 ZNF516Q92618 1163 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 MIB2Q96AX9 1013 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 YIPF6Q96EC8 236 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 PACRGQ96M98 296 aaPredicted RBP6.22□□□□□ -1.41
UBR4-204ENST00000375254 CIB3Q96Q77 187 aaPredicted RBP6.22□□□□□ -1.41
UBR4-204ENST00000375254 TP53RKQ96S44 253 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 CMKLR1Q99788 373 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 GSX1Q9H4S2 264 aaPredicted RBP6.22□□□□□ -1.41
UBR4-204ENST00000375254 PLEKHJ1Q9NW61 149 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 MOKQ9UQ07 419 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 ZNF891A8MT65 544 aaPredicted RBP6.22□□□□□ -1.41
UBR4-204ENST00000375254 F7P08709 466 aaPredicted RBP6.22□□□□□ -1.41
UBR4-204ENST00000375254 FABP4P15090 132 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 ERVK-16P61578 105 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 DPPA4Q7L190 304 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 ZNF321PQ8N8H1 164 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 OR51T1Q8NGJ9 327 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 C5orf34Q96MH7 638 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 CENPMQ9NSP4 180 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 TESQ9UGI8 421 aaKnown RBP6.22□□□□□ -1.41
UBR4-204ENST00000375254 RCE1Q9Y256 329 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 SHANK2Q9UPX8 1470 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 C1RP00736 705 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 GBAP04062 536 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 AGXTP21549 392 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 AK4P27144 223 aaPredicted RBP6.22□□□□□ -1.41
UBR4-204ENST00000375254 ACVR1BP36896 505 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 ENPP2Q13822 863 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 MELKQ14680 651 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 PAFAH1B3Q15102 231 aaKnown RBP6.22□□□□□ -1.41
UBR4-204ENST00000375254 PRAMEF8Q5VWM4 474 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 PRAMEF7Q5VXH5 474 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 DPH1Q9BZG8 443 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 DNAJB11Q9UBS4 358 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 YARS2Q9Y2Z4 477 aaKnown RBP6.22□□□□□ -1.41
UBR4-204ENST00000375254 ADGRL2O95490 1459 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 A2MP01023 1474 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 OR51F1A6NGY5 319 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 CXCL8P10145 99 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 CD80P33681 288 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 PCBP4P57723 403 aaKnown RBP6.22□□□□□ -1.41
UBR4-204ENST00000375254 NFATC2Q13469 925 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 INIPQ9NRY2 104 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 ATF5Q9Y2D1 282 aaPredicted RBP6.22□□□□□ -1.41
UBR4-204ENST00000375254 TMEM129A0AVI4 362 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 OR13C7P0DN81 318 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 HSD17B7P56937 341 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 SH3BP2P78314 561 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 GUCA2BQ16661 112 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 ZNF343Q6P1L6 599 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 BORCS8Q96FH0 119 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 ZNF681Q96N22 645 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 SLC46A1Q96NT5 459 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 TRIB1Q96RU8 372 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 SERTAD4Q9NUC0 356 aa6.22□□□□□ -1.41
UBR4-204ENST00000375254 GPR31O00270 319 aa6.21□□□□□ -1.41
UBR4-204ENST00000375254 DDTP30046 118 aa6.21□□□□□ -1.41
UBR4-204ENST00000375254 CYB5R2Q6BCY4 276 aa6.21□□□□□ -1.41
UBR4-204ENST00000375254 OR4K15Q8NH41 348 aa6.21□□□□□ -1.41
UBR4-204ENST00000375254 TMEM234Q8WY98 164 aa6.21□□□□□ -1.41
UBR4-204ENST00000375254 WDFY2Q96P53 400 aa6.21□□□□□ -1.41
UBR4-204ENST00000375254 ZNF300Q96RE9 604 aaPredicted RBP6.21□□□□□ -1.41
UBR4-204ENST00000375254 GALNT9Q9HCQ5 603 aa6.21□□□□□ -1.41
UBR4-204ENST00000375254 IL17BQ9UHF5 180 aa6.21□□□□□ -1.41
UBR4-204ENST00000375254 GPSM3Q9Y4H4 160 aa6.21□□□□□ -1.41
UBR4-204ENST00000375254 ARRDC5A6NEK1 342 aa6.21□□□□□ -1.41
UBR4-204ENST00000375254 FAM227AF5H4B4 570 aa6.21□□□□□ -1.41
UBR4-204ENST00000375254 H0Y8G0 127 aa6.21□□□□□ -1.41
UBR4-204ENST00000375254 SOX15O60248 233 aa6.21□□□□□ -1.41
UBR4-204ENST00000375254 SLC14A1Q13336 389 aa6.21□□□□□ -1.41
UBR4-204ENST00000375254 UNC50Q53HI1 259 aa6.21□□□□□ -1.41
UBR4-204ENST00000375254 OIT3Q8WWZ8 545 aa6.21□□□□□ -1.41
UBR4-204ENST00000375254 REEP6Q96HR9 211 aa6.21□□□□□ -1.41
UBR4-204ENST00000375254 SORBS1Q9BX66 1292 aaKnown RBP6.21□□□□□ -1.41
UBR4-204ENST00000375254 MEIKINA0A087WXM9 373 aa6.21□□□□□ -1.41
UBR4-204ENST00000375254 ENDOD1O94919 500 aa6.21□□□□□ -1.41
UBR4-204ENST00000375254 PNMTP11086 282 aa6.21□□□□□ -1.41
UBR4-204ENST00000375254 CYB5RLQ6IPT4 315 aa6.21□□□□□ -1.41
UBR4-204ENST00000375254 LGI3Q8N145 548 aa6.21□□□□□ -1.41
UBR4-204ENST00000375254 SLC35G3Q8N808 338 aa6.21□□□□□ -1.41
UBR4-204ENST00000375254 TBC1D20Q96BZ9 403 aa6.21□□□□□ -1.41
UBR4-204ENST00000375254 GHRLQ9UBU3 117 aa6.21□□□□□ -1.41
UBR4-204ENST00000375254 AADACP22760 399 aa6.21□□□□□ -1.41
UBR4-204ENST00000375254 HOXA9P31269 272 aa6.21□□□□□ -1.41
UBR4-204ENST00000375254 RGNQ15493 299 aa6.21□□□□□ -1.41
UBR4-204ENST00000375254 SUCNR1Q9BXA5 334 aa6.21□□□□□ -1.41
UBR4-204ENST00000375254 LIN7CQ9NUP9 197 aaKnown RBP6.21□□□□□ -1.41
UBR4-204ENST00000375254 GDF2Q9UK05 429 aaPredicted RBP6.21□□□□□ -1.41
UBR4-204ENST00000375254 LGALS8O00214 317 aa6.21□□□□□ -1.42
UBR4-204ENST00000375254 PAGE1O75459 146 aa6.21□□□□□ -1.42
UBR4-204ENST00000375254 AMD1P17707 334 aa6.21□□□□□ -1.42
UBR4-204ENST00000375254 STK19P49842 368 aaPredicted RBP6.21□□□□□ -1.42
UBR4-204ENST00000375254 SIRPAP78324 504 aa6.21□□□□□ -1.42
UBR4-204ENST00000375254 HYAL4Q2M3T9 481 aa6.21□□□□□ -1.42
UBR4-204ENST00000375254 CELF3Q5SZQ8 465 aaKnown RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms