RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 ICOSLGO75144 302 aa17.95■□□□□ 0.46
HDAC1-201ENST00000373548 PPP1R3DO95685 299 aa17.95■□□□□ 0.46
HDAC1-201ENST00000373548 IGHA1P01876 353 aa17.95■□□□□ 0.46
HDAC1-201ENST00000373548 BMP4P12644 408 aa17.95■□□□□ 0.46
HDAC1-201ENST00000373548 CPEP16870 476 aa17.95■□□□□ 0.46
HDAC1-201ENST00000373548 CRYBB2P43320 205 aa17.95■□□□□ 0.46
HDAC1-201ENST00000373548 ZNF362Q5T0B9 420 aaPredicted RBP17.95■□□□□ 0.46
HDAC1-201ENST00000373548 FAAH2Q6GMR7 532 aa17.95■□□□□ 0.46
HDAC1-201ENST00000373548 C16orf87Q6PH81 154 aa17.95■□□□□ 0.46
HDAC1-201ENST00000373548 BTLAQ7Z6A9 289 aa17.95■□□□□ 0.46
HDAC1-201ENST00000373548 LHFPL3Q86UP9 236 aa17.95■□□□□ 0.46
HDAC1-201ENST00000373548 IGFN1Q86VF2 1251 aa17.95■□□□□ 0.46
HDAC1-201ENST00000373548 C1orf210Q8IVY1 113 aa17.95■□□□□ 0.46
HDAC1-201ENST00000373548 TMCO5AQ8N6Q1 288 aa17.95■□□□□ 0.46
HDAC1-201ENST00000373548 AMER2Q8N7J2 671 aa17.95■□□□□ 0.46
HDAC1-201ENST00000373548 ZNF485Q8NCK3 441 aa17.95■□□□□ 0.46
HDAC1-201ENST00000373548 S100ZQ8WXG8 99 aa17.95■□□□□ 0.46
HDAC1-201ENST00000373548 GATAD2BQ8WXI9 593 aa17.95■□□□□ 0.46
HDAC1-201ENST00000373548 NACC2Q96BF6 587 aa17.95■□□□□ 0.46
HDAC1-201ENST00000373548 CCDC74BQ96LY2 380 aa17.95■□□□□ 0.46
HDAC1-201ENST00000373548 ZNF649Q9BS31 505 aa17.95■□□□□ 0.46
HDAC1-201ENST00000373548 CDADC1Q9BWV3 514 aa17.95■□□□□ 0.46
HDAC1-201ENST00000373548 WWTR1Q9GZV5 400 aa17.95■□□□□ 0.46
HDAC1-201ENST00000373548 COPS7AQ9UBW8 275 aa17.95■□□□□ 0.46
HDAC1-201ENST00000373548 IGLV3-12A0A075B6K2 115 aa17.95■□□□□ 0.46
HDAC1-201ENST00000373548 YKT6O15498 198 aa17.95■□□□□ 0.46
HDAC1-201ENST00000373548 REM1O75628 298 aa17.95■□□□□ 0.46
HDAC1-201ENST00000373548 PSMA1P25786 263 aaKnown RBP17.95■□□□□ 0.46
HDAC1-201ENST00000373548 NR0B1P51843 470 aaKnown RBP17.95■□□□□ 0.46
HDAC1-201ENST00000373548 HLA-DQA1Q5Y7H0 255 aa17.95■□□□□ 0.46
HDAC1-201ENST00000373548 FCRLBQ6BAA4 426 aa17.95■□□□□ 0.46
HDAC1-201ENST00000373548 B3GLCTQ6Y288 498 aa17.95■□□□□ 0.46
HDAC1-201ENST00000373548 RTL4Q6ZR62 310 aa17.95■□□□□ 0.46
HDAC1-201ENST00000373548 SIRT6Q8N6T7 355 aa17.95■□□□□ 0.46
HDAC1-201ENST00000373548 FNDC8Q8TC99 324 aa17.95■□□□□ 0.46
HDAC1-201ENST00000373548 NAT6Q93015 286 aa17.95■□□□□ 0.46
HDAC1-201ENST00000373548 SGTBQ96EQ0 304 aa17.95■□□□□ 0.46
HDAC1-201ENST00000373548 TRMT61AQ96FX7 289 aaKnown RBP17.95■□□□□ 0.46
HDAC1-201ENST00000373548 WDR12Q9GZL7 423 aaKnown RBP17.95■□□□□ 0.46
HDAC1-201ENST00000373548 NXF2Q9GZY0 626 aaKnown RBP17.95■□□□□ 0.46
HDAC1-201ENST00000373548 MMP27Q9H306 513 aa17.95■□□□□ 0.46
HDAC1-201ENST00000373548 EXOSC4Q9NPD3 245 aaKnown RBP17.95■□□□□ 0.46
HDAC1-201ENST00000373548 EXOSC3Q9NQT5 275 aaKnown RBP17.95■□□□□ 0.46
HDAC1-201ENST00000373548 STUB1Q9UNE7 303 aa17.95■□□□□ 0.46
HDAC1-201ENST00000373548 BAIAP2Q9UQB8 552 aa17.95■□□□□ 0.46
HDAC1-201ENST00000373548 SPIN1Q9Y657 262 aaPredicted RBP17.95■□□□□ 0.46
HDAC1-201ENST00000373548 ZC3H12DA2A288 527 aaKnown RBP17.94■□□□□ 0.46
HDAC1-201ENST00000373548 TO15178 435 aa17.94■□□□□ 0.46
HDAC1-201ENST00000373548 ZNF264O43296 627 aa17.94■□□□□ 0.46
HDAC1-201ENST00000373548 SLC6A6P31641 620 aa17.94■□□□□ 0.46
HDAC1-201ENST00000373548 CCR4P51679 360 aa17.94■□□□□ 0.46
HDAC1-201ENST00000373548 DBPQ10586 325 aaPredicted RBP17.94■□□□□ 0.46
HDAC1-201ENST00000373548 WBP2NLQ6ICG8 309 aa17.94■□□□□ 0.46
HDAC1-201ENST00000373548 GDPGP1Q6ZNW5 385 aa17.94■□□□□ 0.46
HDAC1-201ENST00000373548 MEPCEQ7L2J0 689 aaKnown RBP17.94■□□□□ 0.46
HDAC1-201ENST00000373548 OR9Q1Q8NGQ5 310 aa17.94■□□□□ 0.46
HDAC1-201ENST00000373548 PTP4A1Q93096 173 aa17.94■□□□□ 0.46
HDAC1-201ENST00000373548 RTN4RQ9BZR6 473 aa17.94■□□□□ 0.46
HDAC1-201ENST00000373548 LRRN3E7EW58 273 aa17.93■□□□□ 0.46
HDAC1-201ENST00000373548 J3QRE1 110 aa17.93■□□□□ 0.46
HDAC1-201ENST00000373548 GTPBP1O00178 669 aaKnown RBP17.93■□□□□ 0.46
HDAC1-201ENST00000373548 TSPAN2O60636 221 aa17.93■□□□□ 0.46
HDAC1-201ENST00000373548 NKAIN1Q4KMZ8 207 aa17.93■□□□□ 0.46
HDAC1-201ENST00000373548 PWWP2BQ6NUJ5 590 aa17.93■□□□□ 0.46
HDAC1-201ENST00000373548 SLC29A4Q7RTT9 530 aa17.93■□□□□ 0.46
HDAC1-201ENST00000373548 SLC43A2Q8N370 569 aa17.93■□□□□ 0.46
HDAC1-201ENST00000373548 LRRC17Q8N6Y2 441 aa17.93■□□□□ 0.46
HDAC1-201ENST00000373548 SLC37A3Q8NCC5 494 aa17.93■□□□□ 0.46
HDAC1-201ENST00000373548 KISS1RQ969F8 398 aaPredicted RBP17.93■□□□□ 0.46
HDAC1-201ENST00000373548 ARHGAP9Q9BRR9 750 aa17.93■□□□□ 0.46
HDAC1-201ENST00000373548 ISYNA1Q9NPH2 558 aa17.93■□□□□ 0.46
HDAC1-201ENST00000373548 TNFRSF10DQ9UBN6 386 aa17.93■□□□□ 0.46
HDAC1-201ENST00000373548 RARRES3Q9UL19 164 aa17.93■□□□□ 0.46
HDAC1-201ENST00000373548 A3GALT2U3KPV4 340 aa17.93■□□□□ 0.46
HDAC1-201ENST00000373548 IGKV1D-42A0A075B6H8 117 aa17.93■□□□□ 0.46
HDAC1-201ENST00000373548 RIIAD1A6NNX1 92 aa17.93■□□□□ 0.46
HDAC1-201ENST00000373548 PRR23D1E9PI22 279 aaPredicted RBP17.93■□□□□ 0.46
HDAC1-201ENST00000373548 SCRG1O75711 98 aa17.93■□□□□ 0.46
HDAC1-201ENST00000373548 PRR23D2P0DMB1 279 aaPredicted RBP17.93■□□□□ 0.46
HDAC1-201ENST00000373548 PEPDP12955 493 aa17.93■□□□□ 0.46
HDAC1-201ENST00000373548 IL12BP29460 328 aa17.93■□□□□ 0.46
HDAC1-201ENST00000373548 ATP6V1E1P36543 226 aa17.93■□□□□ 0.46
HDAC1-201ENST00000373548 ITGADQ13349 1161 aa17.93■□□□□ 0.46
HDAC1-201ENST00000373548 ZNF441Q8N8Z8 693 aa17.93■□□□□ 0.46
HDAC1-201ENST00000373548 PSD4Q8NDX1 1056 aa17.93■□□□□ 0.46
HDAC1-201ENST00000373548 OR51G2Q8NGK0 314 aa17.93■□□□□ 0.46
HDAC1-201ENST00000373548 ZNF524Q96C55 264 aa17.93■□□□□ 0.46
HDAC1-201ENST00000373548 ZC3H10Q96K80 434 aaKnown RBP17.93■□□□□ 0.46
HDAC1-201ENST00000373548 SECISBP2Q96T21 854 aaKnown RBP17.93■□□□□ 0.46
HDAC1-201ENST00000373548 KLHDC3Q9BQ90 382 aa17.93■□□□□ 0.46
HDAC1-201ENST00000373548 JAM3Q9BX67 310 aa17.93■□□□□ 0.46
HDAC1-201ENST00000373548 ERVK13-1Q9NX77 482 aa17.93■□□□□ 0.46
HDAC1-201ENST00000373548 IGHV3-20A0A0C4DH32 117 aa17.92■□□□□ 0.46
HDAC1-201ENST00000373548 OR6C76A6NM76 312 aa17.92■□□□□ 0.46
HDAC1-201ENST00000373548 TSPAN19P0C672 248 aa17.92■□□□□ 0.46
HDAC1-201ENST00000373548 MST1P26927 711 aa17.92■□□□□ 0.46
HDAC1-201ENST00000373548 NOS3P29474 1203 aa17.92■□□□□ 0.46
HDAC1-201ENST00000373548 LCN1P31025 176 aa17.92■□□□□ 0.46
HDAC1-201ENST00000373548 SLC9A3P48764 834 aa17.92■□□□□ 0.46
HDAC1-201ENST00000373548 TPBGQ13641 420 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms