RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 GALK2Q01415 458 aa13.3□□□□□ -0.28
LMX1B-202ENST00000373474 SERTAD2Q14140 314 aa13.3□□□□□ -0.28
LMX1B-202ENST00000373474 BCL7AQ4VC05 210 aa13.3□□□□□ -0.28
LMX1B-202ENST00000373474 UNQ6126/PRO20091Q6UXV3 157 aa13.3□□□□□ -0.28
LMX1B-202ENST00000373474 OR4N4Q8N0Y3 316 aa13.3□□□□□ -0.28
LMX1B-202ENST00000373474 LKAAEAR1Q8TD35 194 aa13.3□□□□□ -0.28
LMX1B-202ENST00000373474 BPIFA2Q96DR5 249 aa13.3□□□□□ -0.28
LMX1B-202ENST00000373474 BTBD2Q9BX70 525 aa13.3□□□□□ -0.28
LMX1B-202ENST00000373474 ALOXE3Q9BYJ1 711 aa13.3□□□□□ -0.28
LMX1B-202ENST00000373474 SMCO4Q9NRQ5 59 aa13.3□□□□□ -0.28
LMX1B-202ENST00000373474 ABRACLQ9P1F3 81 aa13.3□□□□□ -0.28
LMX1B-202ENST00000373474 PSORS1C1Q9UIG5 152 aa13.3□□□□□ -0.28
LMX1B-202ENST00000373474 COL22A1Q8NFW1 1626 aaPredicted RBP13.3□□□□□ -0.28
LMX1B-202ENST00000373474 A0A0J9YY10 115 aa13.3□□□□□ -0.28
LMX1B-202ENST00000373474 KIAA0355O15063 1070 aa13.3□□□□□ -0.28
LMX1B-202ENST00000373474 GASTP01350 101 aa13.3□□□□□ -0.28
LMX1B-202ENST00000373474 ERVK-16P61578 105 aa13.3□□□□□ -0.28
LMX1B-202ENST00000373474 DLX2Q07687 328 aaPredicted RBP13.3□□□□□ -0.28
LMX1B-202ENST00000373474 MGAT3Q09327 533 aa13.3□□□□□ -0.28
LMX1B-202ENST00000373474 KIR2DS3Q14952 304 aa13.3□□□□□ -0.28
LMX1B-202ENST00000373474 IRF4Q15306 451 aa13.3□□□□□ -0.28
LMX1B-202ENST00000373474 VRK2Q86Y07 508 aa13.3□□□□□ -0.28
LMX1B-202ENST00000373474 GPR148Q8TDV2 347 aa13.3□□□□□ -0.28
LMX1B-202ENST00000373474 RSC1A1Q92681 617 aa13.3□□□□□ -0.28
LMX1B-202ENST00000373474 WDR83Q9BRX9 315 aaKnown RBP13.3□□□□□ -0.28
LMX1B-202ENST00000373474 NRAPQ86VF7 1730 aa13.3□□□□□ -0.28
LMX1B-202ENST00000373474 FAM171A2A8MVW0 826 aa13.3□□□□□ -0.28
LMX1B-202ENST00000373474 TNFRSF10AO00220 468 aa13.3□□□□□ -0.28
LMX1B-202ENST00000373474 ANKRD28O15084 1053 aa13.3□□□□□ -0.28
LMX1B-202ENST00000373474 AQP9O43315 295 aa13.3□□□□□ -0.28
LMX1B-202ENST00000373474 CRABP1P29762 137 aa13.3□□□□□ -0.28
LMX1B-202ENST00000373474 ZNF542PQ5EBM4 170 aa13.3□□□□□ -0.28
LMX1B-202ENST00000373474 RCBTB1Q8NDN9 531 aa13.3□□□□□ -0.28
LMX1B-202ENST00000373474 SNX18Q96RF0 628 aa13.3□□□□□ -0.28
LMX1B-202ENST00000373474 PSD2Q9BQI7 771 aa13.3□□□□□ -0.28
LMX1B-202ENST00000373474 C8orf33Q9H7E9 229 aaPredicted RBP13.3□□□□□ -0.28
LMX1B-202ENST00000373474 ACSS1Q9NUB1 689 aaPredicted RBP13.3□□□□□ -0.28
LMX1B-202ENST00000373474 ADAMTSL3P82987 1691 aa13.3□□□□□ -0.28
LMX1B-202ENST00000373474 TRBV4-1A0A0J9YWV2 114 aa13.3□□□□□ -0.28
LMX1B-202ENST00000373474 SYT7O43581 403 aa13.3□□□□□ -0.28
LMX1B-202ENST00000373474 IL13RA1P78552 427 aa13.3□□□□□ -0.28
LMX1B-202ENST00000373474 OPCMLQ14982 345 aa13.3□□□□□ -0.28
LMX1B-202ENST00000373474 ARSJQ5FYB0 599 aaPredicted RBP13.3□□□□□ -0.28
LMX1B-202ENST00000373474 CPT1CQ8TCG5 803 aa13.3□□□□□ -0.28
LMX1B-202ENST00000373474 OR52D1Q9H346 318 aa13.3□□□□□ -0.28
LMX1B-202ENST00000373474 USP36Q9P275 1121 aaKnown RBP13.3□□□□□ -0.28
LMX1B-202ENST00000373474 ATXN7L1Q9ULK2 861 aaPredicted RBP13.3□□□□□ -0.28
LMX1B-202ENST00000373474 TP53TG5Q9Y2B4 290 aa13.3□□□□□ -0.28
LMX1B-202ENST00000373474 DDX60LQ5H9U9 1706 aaKnown RBP13.3□□□□□ -0.28
LMX1B-202ENST00000373474 ITGB4P16144 1822 aa13.3□□□□□ -0.28
LMX1B-202ENST00000373474 GGT3PA6NGU5 568 aa13.3□□□□□ -0.28
LMX1B-202ENST00000373474 H0YIV9 168 aa13.3□□□□□ -0.28
LMX1B-202ENST00000373474 CLN5O75503 358 aa13.3□□□□□ -0.28
LMX1B-202ENST00000373474 NR0B1P51843 470 aaKnown RBP13.3□□□□□ -0.28
LMX1B-202ENST00000373474 NKPD1Q17RQ9 610 aa13.3□□□□□ -0.28
LMX1B-202ENST00000373474 ZNF704Q6ZNC4 412 aaPredicted RBP13.3□□□□□ -0.28
LMX1B-202ENST00000373474 FAM122BQ7Z309 247 aa13.3□□□□□ -0.28
LMX1B-202ENST00000373474 UEVLDQ8IX04 471 aa13.3□□□□□ -0.28
LMX1B-202ENST00000373474 STEAP2Q8NFT2 490 aa13.3□□□□□ -0.28
LMX1B-202ENST00000373474 ZFAND1Q8TCF1 268 aa13.3□□□□□ -0.28
LMX1B-202ENST00000373474 SLC25A18Q9H1K4 315 aa13.3□□□□□ -0.28
LMX1B-202ENST00000373474 COPS3Q9UNS2 423 aa13.3□□□□□ -0.28
LMX1B-202ENST00000373474 AKAP11Q9UKA4 1901 aa13.29□□□□□ -0.28
LMX1B-202ENST00000373474 PDGFAP04085 211 aa13.29□□□□□ -0.28
LMX1B-202ENST00000373474 SBK2P0C263 348 aa13.29□□□□□ -0.28
LMX1B-202ENST00000373474 BMP4P12644 408 aa13.29□□□□□ -0.28
LMX1B-202ENST00000373474 UBE2NLQ5JXB2 153 aa13.29□□□□□ -0.28
LMX1B-202ENST00000373474 FAM69BQ5VUD6 431 aa13.29□□□□□ -0.28
LMX1B-202ENST00000373474 NIPAL2Q9H841 368 aa13.29□□□□□ -0.28
LMX1B-202ENST00000373474 FAM212BQ9NTI7 297 aaPredicted RBP13.29□□□□□ -0.28
LMX1B-202ENST00000373474 ADAM29Q9UKF5 820 aa13.29□□□□□ -0.28
LMX1B-202ENST00000373474 LRP5O75197 1615 aa13.29□□□□□ -0.28
LMX1B-202ENST00000373474 LOC102723532A0A0G2JNH3 316 aa13.29□□□□□ -0.28
LMX1B-202ENST00000373474 A6NIZ1 184 aa13.29□□□□□ -0.28
LMX1B-202ENST00000373474 CD300LBA8K4G0 201 aa13.29□□□□□ -0.28
LMX1B-202ENST00000373474 GABRPO00591 440 aa13.29□□□□□ -0.28
LMX1B-202ENST00000373474 HNRNPA2B1P22626 353 aaKnown RBP13.29□□□□□ -0.28
LMX1B-202ENST00000373474 FASLGP48023 281 aa13.29□□□□□ -0.28
LMX1B-202ENST00000373474 TAS2R19P59542 299 aa13.29□□□□□ -0.28
LMX1B-202ENST00000373474 RAP1BP61224 184 aa13.29□□□□□ -0.28
LMX1B-202ENST00000373474 RAP1AP62834 184 aa13.29□□□□□ -0.28
LMX1B-202ENST00000373474 NTHL1P78549 312 aa13.29□□□□□ -0.28
LMX1B-202ENST00000373474 SLC5A12Q1EHB4 618 aa13.29□□□□□ -0.28
LMX1B-202ENST00000373474 HNRNPA1L2Q32P51 320 aaKnown RBP13.29□□□□□ -0.28
LMX1B-202ENST00000373474 ZNF439Q8NDP4 499 aa13.29□□□□□ -0.28
LMX1B-202ENST00000373474 OR6T1Q8NGN1 323 aa13.29□□□□□ -0.28
LMX1B-202ENST00000373474 OR56B4Q8NH76 319 aa13.29□□□□□ -0.28
LMX1B-202ENST00000373474 BADQ92934 168 aa13.29□□□□□ -0.28
LMX1B-202ENST00000373474 BABAM2Q9NXR7 383 aa13.29□□□□□ -0.28
LMX1B-202ENST00000373474 NPIPA5A0A0B4J1W7 369 aa13.29□□□□□ -0.28
LMX1B-202ENST00000373474 NPIPA7E9PJI5 369 aa13.29□□□□□ -0.28
LMX1B-202ENST00000373474 NPIPA8P0DM63 369 aa13.29□□□□□ -0.28
LMX1B-202ENST00000373474 CEBPBP17676 345 aa13.29□□□□□ -0.28
LMX1B-202ENST00000373474 HOXD9P28356 352 aaPredicted RBP13.29□□□□□ -0.28
LMX1B-202ENST00000373474 SSTR2P30874 369 aa13.29□□□□□ -0.28
LMX1B-202ENST00000373474 CX3CR1P49238 355 aa13.29□□□□□ -0.28
LMX1B-202ENST00000373474 POU3F4P49335 361 aa13.29□□□□□ -0.28
LMX1B-202ENST00000373474 SEMA3BQ13214 749 aa13.29□□□□□ -0.28
LMX1B-202ENST00000373474 BOLLQ8N9W6 283 aaKnown RBP13.29□□□□□ -0.28
LMX1B-202ENST00000373474 OR51T1Q8NGJ9 327 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms