RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 TTC9Q92623 222 aa11.77□□□□□ -0.53
CTPS1-202ENST00000372621 SLC23A1Q9UHI7 598 aa11.77□□□□□ -0.53
CTPS1-202ENST00000372621 FBXL21Q9UKT6 434 aa11.77□□□□□ -0.53
CTPS1-202ENST00000372621 OGG1O15527 345 aa11.76□□□□□ -0.53
CTPS1-202ENST00000372621 GYPBP06028 91 aa11.76□□□□□ -0.53
CTPS1-202ENST00000372621 PYCR1P32322 319 aa11.76□□□□□ -0.53
CTPS1-202ENST00000372621 SEC13P55735 322 aa11.76□□□□□ -0.53
CTPS1-202ENST00000372621 EXOSC7Q15024 291 aaKnown RBP11.76□□□□□ -0.53
CTPS1-202ENST00000372621 CAMKVQ8NCB2 501 aa11.76□□□□□ -0.53
CTPS1-202ENST00000372621 TNFRSF13CQ96RJ3 184 aa11.76□□□□□ -0.53
CTPS1-202ENST00000372621 MFRPQ9BY79 579 aa11.76□□□□□ -0.53
CTPS1-202ENST00000372621 ZFP64Q9NPA5 681 aa11.76□□□□□ -0.53
CTPS1-202ENST00000372621 POLE3Q9NRF9 147 aa11.76□□□□□ -0.53
CTPS1-202ENST00000372621 NUDT15Q9NV35 164 aa11.76□□□□□ -0.53
CTPS1-202ENST00000372621 MRPL39Q9NYK5 338 aaKnown RBP11.76□□□□□ -0.53
CTPS1-202ENST00000372621 USP36Q9P275 1121 aaKnown RBP11.76□□□□□ -0.53
CTPS1-202ENST00000372621 SERTAD3Q9UJW9 196 aa11.76□□□□□ -0.53
CTPS1-202ENST00000372621 ARHGEF17Q96PE2 2063 aaPredicted RBP11.76□□□□□ -0.53
CTPS1-202ENST00000372621 TBC1D3DA0A087WVF3 549 aa11.76□□□□□ -0.53
CTPS1-202ENST00000372621 TBC1D3IA0A087WXS9 549 aa11.76□□□□□ -0.53
CTPS1-202ENST00000372621 TBC1D3LB9A6J9 549 aa11.76□□□□□ -0.53
CTPS1-202ENST00000372621 UBL3O95164 117 aa11.76□□□□□ -0.53
CTPS1-202ENST00000372621 GPR75O95800 540 aa11.76□□□□□ -0.53
CTPS1-202ENST00000372621 TFP02787 698 aa11.76□□□□□ -0.53
CTPS1-202ENST00000372621 TBC1D3HP0C7X1 549 aa11.76□□□□□ -0.53
CTPS1-202ENST00000372621 ATF1P18846 271 aa11.76□□□□□ -0.53
CTPS1-202ENST00000372621 POU4F2Q12837 409 aa11.76□□□□□ -0.53
CTPS1-202ENST00000372621 TBC1D3CQ6IPX1 549 aa11.76□□□□□ -0.53
CTPS1-202ENST00000372621 FIGLAQ6QHK4 219 aa11.76□□□□□ -0.53
CTPS1-202ENST00000372621 LYPD4Q6UWN0 246 aa11.76□□□□□ -0.53
CTPS1-202ENST00000372621 RTL4Q6ZR62 310 aa11.76□□□□□ -0.53
CTPS1-202ENST00000372621 TBC1D3Q8IZP1 549 aaPredicted RBP11.76□□□□□ -0.53
CTPS1-202ENST00000372621 GRHL3Q8TE85 626 aa11.76□□□□□ -0.53
CTPS1-202ENST00000372621 CNOT9Q92600 299 aaKnown RBP11.76□□□□□ -0.53
CTPS1-202ENST00000372621 MED28Q9H204 178 aa11.76□□□□□ -0.53
CTPS1-202ENST00000372621 ICAM5Q9UMF0 924 aa11.76□□□□□ -0.53
CTPS1-202ENST00000372621 NUBP2Q9Y5Y2 271 aa11.76□□□□□ -0.53
CTPS1-202ENST00000372621 DHFRP00374 187 aa11.75□□□□□ -0.53
CTPS1-202ENST00000372621 TCRBP04435 133 aa11.75□□□□□ -0.53
CTPS1-202ENST00000372621 EPXP11678 715 aa11.75□□□□□ -0.53
CTPS1-202ENST00000372621 ZNF10P21506 573 aaPredicted RBP11.75□□□□□ -0.53
CTPS1-202ENST00000372621 NT5EP21589 574 aa11.75□□□□□ -0.53
CTPS1-202ENST00000372621 GABRA3P34903 492 aa11.75□□□□□ -0.53
CTPS1-202ENST00000372621 ACAA2P42765 397 aaKnown RBP11.75□□□□□ -0.53
CTPS1-202ENST00000372621 P2RX3P56373 397 aa11.75□□□□□ -0.53
CTPS1-202ENST00000372621 RPS11P62280 158 aaKnown RBP eCLIP11.75□□□□□ -0.53
CTPS1-202ENST00000372621 POU6F2P78424 691 aaPredicted RBP11.75□□□□□ -0.53
CTPS1-202ENST00000372621 PRRT3Q5FWE3 981 aa11.75□□□□□ -0.53
CTPS1-202ENST00000372621 ANKRD54Q6NXT1 300 aa11.75□□□□□ -0.53
CTPS1-202ENST00000372621 ENPP7Q6UWV6 458 aa11.75□□□□□ -0.53
CTPS1-202ENST00000372621 LINC00114Q6XXX2 140 aa11.75□□□□□ -0.53
CTPS1-202ENST00000372621 NUDT18Q6ZVK8 323 aa11.75□□□□□ -0.53
CTPS1-202ENST00000372621 KRT74Q7RTS7 529 aa11.75□□□□□ -0.53
CTPS1-202ENST00000372621 OR4D9Q8NGE8 314 aa11.75□□□□□ -0.53
CTPS1-202ENST00000372621 GPR137Q96N19 417 aa11.75□□□□□ -0.53
CTPS1-202ENST00000372621 DPAGT1Q9H3H5 408 aa11.75□□□□□ -0.53
CTPS1-202ENST00000372621 EVA1AQ9H8M9 152 aa11.75□□□□□ -0.53
CTPS1-202ENST00000372621 TMEM27Q9HBJ8 222 aa11.75□□□□□ -0.53
CTPS1-202ENST00000372621 EMC7Q9NPA0 242 aa11.75□□□□□ -0.53
CTPS1-202ENST00000372621 KLHL1Q9NR64 748 aa11.75□□□□□ -0.53
CTPS1-202ENST00000372621 CHRNA9Q9UGM1 479 aa11.75□□□□□ -0.53
CTPS1-202ENST00000372621 TRBV23OR9-2A0A075B6M9 112 aa11.75□□□□□ -0.53
CTPS1-202ENST00000372621 TRAV6A0A075B6T7 132 aa11.75□□□□□ -0.53
CTPS1-202ENST00000372621 A0A1B0GWA3 101 aa11.75□□□□□ -0.53
CTPS1-202ENST00000372621 NKX2-2O95096 273 aa11.75□□□□□ -0.53
CTPS1-202ENST00000372621 RBM34P42696 430 aaKnown RBP11.75□□□□□ -0.53
CTPS1-202ENST00000372621 ZNF782Q6ZMW2 699 aaPredicted RBP11.75□□□□□ -0.53
CTPS1-202ENST00000372621 GRAMD2AQ8IUY3 354 aa11.75□□□□□ -0.53
CTPS1-202ENST00000372621 SLC43A2Q8N370 569 aa11.75□□□□□ -0.53
CTPS1-202ENST00000372621 OR5T3Q8NGG3 340 aa11.75□□□□□ -0.53
CTPS1-202ENST00000372621 RSC1A1Q92681 617 aa11.75□□□□□ -0.53
CTPS1-202ENST00000372621 SMIM19Q96E16 107 aa11.75□□□□□ -0.53
CTPS1-202ENST00000372621 ABRACLQ9P1F3 81 aa11.75□□□□□ -0.53
CTPS1-202ENST00000372621 A0A1W2PRG6 482 aa11.75□□□□□ -0.53
CTPS1-202ENST00000372621 H0YGG7 62 aa11.75□□□□□ -0.53
CTPS1-202ENST00000372621 HCCSP53701 268 aa11.75□□□□□ -0.53
CTPS1-202ENST00000372621 ARF3P61204 181 aaPredicted RBP11.75□□□□□ -0.53
CTPS1-202ENST00000372621 DGCR2P98153 550 aa11.75□□□□□ -0.53
CTPS1-202ENST00000372621 GGTLC2Q14390 218 aa11.75□□□□□ -0.53
CTPS1-202ENST00000372621 CDK5R1Q15078 307 aa11.75□□□□□ -0.53
CTPS1-202ENST00000372621 ARHGAP11AQ6P4F7 1023 aa11.75□□□□□ -0.53
CTPS1-202ENST00000372621 ANGPTL6Q8NI99 470 aa11.75□□□□□ -0.53
CTPS1-202ENST00000372621 ASB12Q8WXK4 309 aa11.75□□□□□ -0.53
CTPS1-202ENST00000372621 THAP4Q8WY91 577 aa11.75□□□□□ -0.53
CTPS1-202ENST00000372621 PELI1Q96FA3 418 aa11.75□□□□□ -0.53
CTPS1-202ENST00000372621 ZFYVE21Q9BQ24 234 aa11.75□□□□□ -0.53
CTPS1-202ENST00000372621 EVA1BQ9NVM1 165 aa11.75□□□□□ -0.53
CTPS1-202ENST00000372621 ACTR10Q9NZ32 417 aa11.75□□□□□ -0.53
CTPS1-202ENST00000372621 TICRRQ7Z2Z1 1910 aa11.74□□□□□ -0.53
CTPS1-202ENST00000372621 H0Y8X5 98 aa11.74□□□□□ -0.53
CTPS1-202ENST00000372621 NDUFB5O43674 189 aa11.74□□□□□ -0.53
CTPS1-202ENST00000372621 SERPINA3P01011 423 aa11.74□□□□□ -0.53
CTPS1-202ENST00000372621 CD3GP09693 182 aa11.74□□□□□ -0.53
CTPS1-202ENST00000372621 POLR2CP19387 275 aaPredicted RBP11.74□□□□□ -0.53
CTPS1-202ENST00000372621 STOMP27105 288 aa11.74□□□□□ -0.53
CTPS1-202ENST00000372621 SLC6A6P31641 620 aa11.74□□□□□ -0.53
CTPS1-202ENST00000372621 NFATC4Q14934 902 aa11.74□□□□□ -0.53
CTPS1-202ENST00000372621 ANGPT1Q15389 498 aa11.74□□□□□ -0.53
CTPS1-202ENST00000372621 TP53I3Q53FA7 332 aa11.74□□□□□ -0.53
CTPS1-202ENST00000372621 TMEM196Q5HYL7 178 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms