RNA–Protein interactions for RNA: ENST00000371648.4

EDF1-202, Transcript of endothelial differentiation related factor 1, humanhuman

TSL 1 (best) BASIC

Gene EDF1, Length 809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDF1-202ENST00000371648 GMNCA6NCL1 334 aa12.97□□□□□ -0.33
EDF1-202ENST00000371648 EEF1E1-BLOC1S5C9J1V9 151 aa12.97□□□□□ -0.33
EDF1-202ENST00000371648 ADAMDEC1O15204 470 aa12.97□□□□□ -0.33
EDF1-202ENST00000371648 EEF1E1O43324 174 aaKnown RBP12.97□□□□□ -0.33
EDF1-202ENST00000371648 EFNA2O43921 213 aa12.97□□□□□ -0.33
EDF1-202ENST00000371648 CXCL13O43927 109 aa12.97□□□□□ -0.33
EDF1-202ENST00000371648 PGM3O95394 542 aa12.97□□□□□ -0.33
EDF1-202ENST00000371648 PLGP00747 810 aaPredicted RBP12.97□□□□□ -0.33
EDF1-202ENST00000371648 TFPIP10646 304 aa12.97□□□□□ -0.33
EDF1-202ENST00000371648 BMP2P12643 396 aa12.97□□□□□ -0.33
EDF1-202ENST00000371648 CCNA2P20248 432 aa12.97□□□□□ -0.33
EDF1-202ENST00000371648 ELK4P28324 431 aa12.97□□□□□ -0.33
EDF1-202ENST00000371648 ADSLP30566 484 aaPredicted RBP12.97□□□□□ -0.33
EDF1-202ENST00000371648 SLC7A1P30825 629 aa12.97□□□□□ -0.33
EDF1-202ENST00000371648 PEX19P40855 299 aa12.97□□□□□ -0.33
EDF1-202ENST00000371648 MTPNP58546 118 aa12.97□□□□□ -0.33
EDF1-202ENST00000371648 GNGT1P63211 74 aa12.97□□□□□ -0.33
EDF1-202ENST00000371648 EEF1A1P68104 462 aaKnown RBP12.97□□□□□ -0.33
EDF1-202ENST00000371648 FOXF2Q12947 444 aa12.97□□□□□ -0.33
EDF1-202ENST00000371648 CAPRIN1Q14444 709 aaKnown RBP12.97□□□□□ -0.33
EDF1-202ENST00000371648 CYP51A1Q16850 503 aa12.97□□□□□ -0.33
EDF1-202ENST00000371648 ZSWIM7Q19AV6 140 aa12.97□□□□□ -0.33
EDF1-202ENST00000371648 EEF1A1P5Q5VTE0 462 aa12.97□□□□□ -0.33
EDF1-202ENST00000371648 REEP3Q6NUK4 255 aa12.97□□□□□ -0.33
EDF1-202ENST00000371648 SPATA21Q7Z572 469 aa12.97□□□□□ -0.33
EDF1-202ENST00000371648 ADGRE4PQ86SQ3 457 aa12.97□□□□□ -0.33
EDF1-202ENST00000371648 SNX32Q86XE0 403 aa12.97□□□□□ -0.33
EDF1-202ENST00000371648 ZNF440Q8IYI8 595 aa12.97□□□□□ -0.33
EDF1-202ENST00000371648 METTL25Q8N6Q8 603 aa12.97□□□□□ -0.33
EDF1-202ENST00000371648 CNEP1R1Q8N9A8 125 aa12.97□□□□□ -0.33
EDF1-202ENST00000371648 PCYOX1LQ8NBM8 494 aa12.97□□□□□ -0.33
EDF1-202ENST00000371648 OR2V1Q8NHB1 315 aa12.97□□□□□ -0.33
EDF1-202ENST00000371648 FNDC9Q8TBE3 224 aa12.97□□□□□ -0.33
EDF1-202ENST00000371648 CPPED1Q9BRF8 314 aaPredicted RBP12.97□□□□□ -0.33
EDF1-202ENST00000371648 IKZF5Q9H5V7 419 aa12.97□□□□□ -0.33
EDF1-202ENST00000371648 BCL2L10Q9HD36 194 aa12.97□□□□□ -0.33
EDF1-202ENST00000371648 EXOSC3Q9NQT5 275 aaKnown RBP12.97□□□□□ -0.33
EDF1-202ENST00000371648 ACER3Q9NUN7 267 aa12.97□□□□□ -0.33
EDF1-202ENST00000371648 ARMCX1Q9P291 453 aa12.97□□□□□ -0.33
EDF1-202ENST00000371648 ST6GALNAC2Q9UJ37 374 aa12.97□□□□□ -0.33
EDF1-202ENST00000371648 ZNF443Q9Y2A4 671 aaPredicted RBP12.97□□□□□ -0.33
EDF1-202ENST00000371648 ZNF175Q9Y473 711 aa12.97□□□□□ -0.33
EDF1-202ENST00000371648 ITPR3Q14573 2671 aa12.96□□□□□ -0.33
EDF1-202ENST00000371648 PRRC2AP48634 2157 aaKnown RBP12.96□□□□□ -0.33
EDF1-202ENST00000371648 CFAP73A6NFT4 308 aa12.96□□□□□ -0.33
EDF1-202ENST00000371648 FBP2O00757 339 aa12.96□□□□□ -0.33
EDF1-202ENST00000371648 MRASO14807 208 aa12.96□□□□□ -0.33
EDF1-202ENST00000371648 DNAJA2O60884 412 aa12.96□□□□□ -0.33
EDF1-202ENST00000371648 IL18BPO95998 194 aa12.96□□□□□ -0.33
EDF1-202ENST00000371648 THBS1P07996 1170 aa12.96□□□□□ -0.33
EDF1-202ENST00000371648 GKN3PP0CG01 181 aa12.96□□□□□ -0.33
EDF1-202ENST00000371648 FCGR2AP12318 317 aa12.96□□□□□ -0.33
EDF1-202ENST00000371648 CD99P14209 185 aa12.96□□□□□ -0.33
EDF1-202ENST00000371648 RPS4Y1P22090 263 aaKnown RBP12.96□□□□□ -0.33
EDF1-202ENST00000371648 LSP1P33241 339 aa12.96□□□□□ -0.33
EDF1-202ENST00000371648 APOBEC1P41238 236 aaKnown RBP12.96□□□□□ -0.33
EDF1-202ENST00000371648 COPZ1P61923 177 aa12.96□□□□□ -0.33
EDF1-202ENST00000371648 SELENBP1Q13228 472 aa12.96□□□□□ -0.33
EDF1-202ENST00000371648 SCARB2Q14108 478 aa12.96□□□□□ -0.33
EDF1-202ENST00000371648 SLC25A53Q5H9E4 307 aa12.96□□□□□ -0.33
EDF1-202ENST00000371648 PRAMEF8Q5VWM4 474 aa12.96□□□□□ -0.33
EDF1-202ENST00000371648 PRAMEF7Q5VXH5 474 aa12.96□□□□□ -0.33
EDF1-202ENST00000371648 GTF2IRD2BQ6EKJ0 949 aa12.96□□□□□ -0.33
EDF1-202ENST00000371648 ZNF836Q6ZNA1 936 aa12.96□□□□□ -0.33
EDF1-202ENST00000371648 PLEKHM3Q6ZWE6 761 aa12.96□□□□□ -0.33
EDF1-202ENST00000371648 GTF2IRD2Q86UP8 949 aa12.96□□□□□ -0.33
EDF1-202ENST00000371648 CDC20BQ86Y33 519 aa12.96□□□□□ -0.33
EDF1-202ENST00000371648 CLIP4Q8N3C7 705 aa12.96□□□□□ -0.33
EDF1-202ENST00000371648 FAM71CQ8NEG0 241 aa12.96□□□□□ -0.33
EDF1-202ENST00000371648 FAM222BQ8WU58 562 aa12.96□□□□□ -0.33
EDF1-202ENST00000371648 NINJ1Q92982 152 aa12.96□□□□□ -0.33
EDF1-202ENST00000371648 ZNF524Q96C55 264 aa12.96□□□□□ -0.33
EDF1-202ENST00000371648 ZNF607Q96SK3 696 aa12.96□□□□□ -0.33
EDF1-202ENST00000371648 FOXC2Q99958 501 aa12.96□□□□□ -0.33
EDF1-202ENST00000371648 SH3GL1Q99961 368 aa12.96□□□□□ -0.33
EDF1-202ENST00000371648 SPATA5L1Q9BVQ7 753 aa12.96□□□□□ -0.33
EDF1-202ENST00000371648 SFXN3Q9BWM7 321 aa12.96□□□□□ -0.33
EDF1-202ENST00000371648 GID8Q9NWU2 228 aa12.96□□□□□ -0.33
EDF1-202ENST00000371648 PLEKHA6Q9Y2H5 1048 aa12.96□□□□□ -0.33
EDF1-202ENST00000371648 GMEB1Q9Y692 573 aa12.96□□□□□ -0.33
EDF1-202ENST00000371648 ZFHX3Q15911 3703 aa12.96□□□□□ -0.33
EDF1-202ENST00000371648 DSPPQ9NZW4 1301 aa12.95□□□□□ -0.34
EDF1-202ENST00000371648 FAM221AA4D161 298 aa12.95□□□□□ -0.34
EDF1-202ENST00000371648 CDHR4A6H8M9 788 aa12.95□□□□□ -0.34
EDF1-202ENST00000371648 A6NNC1 897 aa12.95□□□□□ -0.34
EDF1-202ENST00000371648 BBIP1A8MTZ0 92 aa12.95□□□□□ -0.34
EDF1-202ENST00000371648 AP3D1O14617 1153 aa12.95□□□□□ -0.34
EDF1-202ENST00000371648 SERPINB7O75635 380 aa12.95□□□□□ -0.34
EDF1-202ENST00000371648 SMNDC1O75940 238 aaKnown RBP eCLIP12.95□□□□□ -0.34
EDF1-202ENST00000371648 NTN1O95631 604 aa12.95□□□□□ -0.34
EDF1-202ENST00000371648 NPPAP01160 153 aa12.95□□□□□ -0.34
EDF1-202ENST00000371648 PABPC4LP0CB38 370 aaKnown RBP12.95□□□□□ -0.34
EDF1-202ENST00000371648 ARAFP10398 606 aa12.95□□□□□ -0.34
EDF1-202ENST00000371648 ETS2P15036 469 aa12.95□□□□□ -0.34
EDF1-202ENST00000371648 SHC1P29353 583 aa12.95□□□□□ -0.34
EDF1-202ENST00000371648 AQP1P29972 269 aa12.95□□□□□ -0.34
EDF1-202ENST00000371648 CPA2P48052 419 aa12.95□□□□□ -0.34
EDF1-202ENST00000371648 SIRPAP78324 504 aa12.95□□□□□ -0.34
EDF1-202ENST00000371648 CTU2Q2VPK5 515 aaKnown RBP12.95□□□□□ -0.34
EDF1-202ENST00000371648 TRMT5Q32P41 509 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms