RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 S100A3P33764 101 aa14.33□□□□□ -0.12
VMA21-202ENST00000370361 CHI3L1P36222 383 aaPredicted RBP14.33□□□□□ -0.12
VMA21-202ENST00000370361 DIO1P49895 249 aa14.33□□□□□ -0.12
VMA21-202ENST00000370361 SLC18A1P54219 525 aa14.33□□□□□ -0.12
VMA21-202ENST00000370361 RPS4XP62701 263 aaKnown RBP14.33□□□□□ -0.12
VMA21-202ENST00000370361 MERTKQ12866 999 aa14.33□□□□□ -0.12
VMA21-202ENST00000370361 STX3Q13277 289 aa14.33□□□□□ -0.12
VMA21-202ENST00000370361 GNA13Q14344 377 aa14.33□□□□□ -0.12
VMA21-202ENST00000370361 NCMAPQ5T1S8 102 aa14.33□□□□□ -0.12
VMA21-202ENST00000370361 GRINAQ7Z429 371 aa14.33□□□□□ -0.12
VMA21-202ENST00000370361 SPATA19Q7Z5L4 167 aa14.33□□□□□ -0.12
VMA21-202ENST00000370361 GALNT5Q7Z7M9 940 aa14.33□□□□□ -0.12
VMA21-202ENST00000370361 MTDHQ86UE4 582 aaKnown RBP14.33□□□□□ -0.12
VMA21-202ENST00000370361 ANKRD42Q8N9B4 389 aa14.33□□□□□ -0.12
VMA21-202ENST00000370361 ATP6V1C2Q8NEY4 427 aa14.33□□□□□ -0.12
VMA21-202ENST00000370361 PIGXQ8TBF5 258 aa14.33□□□□□ -0.12
VMA21-202ENST00000370361 XAGE5Q8WWM1 108 aa14.33□□□□□ -0.12
VMA21-202ENST00000370361 AKAP1Q92667 903 aaKnown RBP eCLIP14.33□□□□□ -0.12
VMA21-202ENST00000370361 FBXW5Q969U6 566 aa14.33□□□□□ -0.12
VMA21-202ENST00000370361 GTPBP3Q969Y2 492 aaKnown RBP14.33□□□□□ -0.12
VMA21-202ENST00000370361 ROPN1LQ96C74 230 aa14.33□□□□□ -0.12
VMA21-202ENST00000370361 TRMT61AQ96FX7 289 aaKnown RBP14.33□□□□□ -0.12
VMA21-202ENST00000370361 RADILQ96JH8 1075 aa14.33□□□□□ -0.12
VMA21-202ENST00000370361 CCDC115Q96NT0 180 aa14.33□□□□□ -0.12
VMA21-202ENST00000370361 CHRNA9Q9UGM1 479 aa14.33□□□□□ -0.12
VMA21-202ENST00000370361 MKLN1Q9UL63 735 aa14.33□□□□□ -0.12
VMA21-202ENST00000370361 ROS1P08922 2347 aa14.32□□□□□ -0.12
VMA21-202ENST00000370361 FCMRO60667 390 aa14.32□□□□□ -0.12
VMA21-202ENST00000370361 CYP7B1O75881 506 aa14.32□□□□□ -0.12
VMA21-202ENST00000370361 ADAP00813 363 aa14.32□□□□□ -0.12
VMA21-202ENST00000370361 UQCRBP14927 111 aa14.32□□□□□ -0.12
VMA21-202ENST00000370361 COX5AP20674 150 aa14.32□□□□□ -0.12
VMA21-202ENST00000370361 PGM1P36871 562 aa14.32□□□□□ -0.12
VMA21-202ENST00000370361 MAGOHP61326 146 aaKnown RBP14.32□□□□□ -0.12
VMA21-202ENST00000370361 TAB1Q15750 504 aa14.32□□□□□ -0.12
VMA21-202ENST00000370361 NDUFAF6Q330K2 333 aa14.32□□□□□ -0.12
VMA21-202ENST00000370361 TIMM23BQ5SRD1 257 aa14.32□□□□□ -0.12
VMA21-202ENST00000370361 HHATQ5VTY9 493 aa14.32□□□□□ -0.12
VMA21-202ENST00000370361 ABLIM2Q6H8Q1 611 aa14.32□□□□□ -0.12
VMA21-202ENST00000370361 TYW3Q6IPR3 259 aaKnown RBP14.32□□□□□ -0.12
VMA21-202ENST00000370361 BHLHA15Q7RTS1 189 aaPredicted RBP14.32□□□□□ -0.12
VMA21-202ENST00000370361 ARFGAP2Q8N6H7 521 aa14.32□□□□□ -0.12
VMA21-202ENST00000370361 GLB1L3Q8NCI6 653 aaPredicted RBP14.32□□□□□ -0.12
VMA21-202ENST00000370361 ZNF563Q8TA94 476 aa14.32□□□□□ -0.12
VMA21-202ENST00000370361 PIWIL2Q8TC59 973 aaKnown RBP14.32□□□□□ -0.12
VMA21-202ENST00000370361 MUCL1Q96DR8 90 aa14.32□□□□□ -0.12
VMA21-202ENST00000370361 TRNT1Q96Q11 434 aaKnown RBP14.32□□□□□ -0.12
VMA21-202ENST00000370361 PAIP2Q9BPZ3 127 aaKnown RBP14.32□□□□□ -0.12
VMA21-202ENST00000370361 SLC35A5Q9BS91 424 aa14.32□□□□□ -0.12
VMA21-202ENST00000370361 CCDC106Q9BWC9 280 aa14.32□□□□□ -0.12
VMA21-202ENST00000370361 GRIP2Q9C0E4 1043 aa14.32□□□□□ -0.12
VMA21-202ENST00000370361 FAIMQ9NVQ4 179 aa14.32□□□□□ -0.12
VMA21-202ENST00000370361 MARCOQ9UEW3 520 aaPredicted RBP14.32□□□□□ -0.12
VMA21-202ENST00000370361 KCNE5Q9UJ90 142 aa14.32□□□□□ -0.12
VMA21-202ENST00000370361 A0A1W2PNR3 127 aa14.31□□□□□ -0.12
VMA21-202ENST00000370361 TRPC5OSA6NMA1 111 aa14.31□□□□□ -0.12
VMA21-202ENST00000370361 SLCO1B7G3V0H7 640 aa14.31□□□□□ -0.12
VMA21-202ENST00000370361 FAAHO00519 579 aa14.31□□□□□ -0.12
VMA21-202ENST00000370361 SMAD9O15198 467 aaKnown RBP14.31□□□□□ -0.12
VMA21-202ENST00000370361 H6PDO95479 791 aa14.31□□□□□ -0.12
VMA21-202ENST00000370361 OR12D1P0DN82 309 aa14.31□□□□□ -0.12
VMA21-202ENST00000370361 ATP5J2P56134 94 aa14.31□□□□□ -0.12
VMA21-202ENST00000370361 KCNJ10P78508 379 aa14.31□□□□□ -0.12
VMA21-202ENST00000370361 BST1Q10588 318 aa14.31□□□□□ -0.12
VMA21-202ENST00000370361 CAPRIN1Q14444 709 aaKnown RBP14.31□□□□□ -0.12
VMA21-202ENST00000370361 FAM174BQ3ZCQ3 159 aa14.31□□□□□ -0.12
VMA21-202ENST00000370361 TNFAIP8L2Q6P589 184 aaPredicted RBP14.31□□□□□ -0.12
VMA21-202ENST00000370361 ZNF100Q8IYN0 542 aa14.31□□□□□ -0.12
VMA21-202ENST00000370361 ZBTB18Q99592 522 aa14.31□□□□□ -0.12
VMA21-202ENST00000370361 NUF2Q9BZD4 464 aa14.31□□□□□ -0.12
VMA21-202ENST00000370361 ING1Q9UK53 422 aaPredicted RBP14.31□□□□□ -0.12
VMA21-202ENST00000370361 TRAPPC4Q9Y296 219 aa14.31□□□□□ -0.12
VMA21-202ENST00000370361 ZNF814B7Z6K7 855 aa14.3□□□□□ -0.12
VMA21-202ENST00000370361 EIF1BO60739 113 aaKnown RBP14.3□□□□□ -0.12
VMA21-202ENST00000370361 CPSF4O95639 269 aaKnown RBP14.3□□□□□ -0.12
VMA21-202ENST00000370361 GGT1P19440 569 aa14.3□□□□□ -0.12
VMA21-202ENST00000370361 SLC16A1P53985 500 aa14.3□□□□□ -0.12
VMA21-202ENST00000370361 PPA1Q15181 289 aa14.3□□□□□ -0.12
VMA21-202ENST00000370361 ZSWIM7Q19AV6 140 aa14.3□□□□□ -0.12
VMA21-202ENST00000370361 ZNF672Q499Z4 452 aaPredicted RBP14.3□□□□□ -0.12
VMA21-202ENST00000370361 GPAT3Q53EU6 434 aa14.3□□□□□ -0.12
VMA21-202ENST00000370361 SPANXN4Q5MJ08 99 aa14.3□□□□□ -0.12
VMA21-202ENST00000370361 FRRS1Q6ZNA5 592 aa14.3□□□□□ -0.12
VMA21-202ENST00000370361 ANKRD46Q86W74 232 aa14.3□□□□□ -0.12
VMA21-202ENST00000370361 ZNF440Q8IYI8 595 aa14.3□□□□□ -0.12
VMA21-202ENST00000370361 RAB3IL1Q8TBN0 382 aa14.3□□□□□ -0.12
VMA21-202ENST00000370361 NUDT8Q8WV74 236 aa14.3□□□□□ -0.12
VMA21-202ENST00000370361 PPP1R36Q96LQ0 422 aa14.3□□□□□ -0.12
VMA21-202ENST00000370361 PANX1Q96RD7 426 aa14.3□□□□□ -0.12
VMA21-202ENST00000370361 SMR3AQ99954 134 aa14.3□□□□□ -0.12
VMA21-202ENST00000370361 QRSL1Q9H0R6 528 aaKnown RBP14.3□□□□□ -0.12
VMA21-202ENST00000370361 MGAT4BQ9UQ53 548 aa14.3□□□□□ -0.12
VMA21-202ENST00000370361 IGHV3-15A0A0B4J1V0 119 aa14.29□□□□□ -0.12
VMA21-202ENST00000370361 GOLGA8QA0A0J9YX86 632 aa14.29□□□□□ -0.12
VMA21-202ENST00000370361 GOLGA8OA6NCC3 632 aa14.29□□□□□ -0.12
VMA21-202ENST00000370361 GOLGA8NF8WBI6 632 aa14.29□□□□□ -0.12
VMA21-202ENST00000370361 OVOL3O00110 214 aa14.29□□□□□ -0.12
VMA21-202ENST00000370361 ZNF208O43345 1280 aa14.29□□□□□ -0.12
VMA21-202ENST00000370361 PGM3O95394 542 aa14.29□□□□□ -0.12
VMA21-202ENST00000370361 KRT75O95678 551 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms