RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 SERPINA5P05154 406 aa6.35□□□□□ -1.39
CSDE1-204ENST00000369530 BLKP51451 505 aa6.35□□□□□ -1.39
CSDE1-204ENST00000369530 AKR1D1P51857 326 aa6.35□□□□□ -1.39
CSDE1-204ENST00000369530 CHAF1BQ13112 559 aa6.35□□□□□ -1.39
CSDE1-204ENST00000369530 CAPRIN1Q14444 709 aaKnown RBP6.35□□□□□ -1.39
CSDE1-204ENST00000369530 PAN3Q58A45 887 aaKnown RBP6.35□□□□□ -1.39
CSDE1-204ENST00000369530 PRAMEF14Q5SWL7 426 aa6.35□□□□□ -1.39
CSDE1-204ENST00000369530 HACD4Q5VWC8 232 aa6.35□□□□□ -1.39
CSDE1-204ENST00000369530 VASNQ6EMK4 673 aa6.35□□□□□ -1.39
CSDE1-204ENST00000369530 BHLHB9Q6PI77 547 aa6.35□□□□□ -1.39
CSDE1-204ENST00000369530 UQCC3Q6UW78 93 aa6.35□□□□□ -1.39
CSDE1-204ENST00000369530 IGFL3Q6UXB1 125 aa6.35□□□□□ -1.39
CSDE1-204ENST00000369530 CERS6Q6ZMG9 384 aa6.35□□□□□ -1.39
CSDE1-204ENST00000369530 CCDC71Q8IV32 467 aaPredicted RBP6.35□□□□□ -1.39
CSDE1-204ENST00000369530 OR2T11Q8NH01 316 aa6.35□□□□□ -1.39
CSDE1-204ENST00000369530 TWIST2Q8WVJ9 160 aa6.35□□□□□ -1.39
CSDE1-204ENST00000369530 KCNJ9Q92806 393 aa6.35□□□□□ -1.39
CSDE1-204ENST00000369530 USP7Q93009 1102 aa6.35□□□□□ -1.39
CSDE1-204ENST00000369530 ERVK-6Q9BXR3 956 aa6.35□□□□□ -1.39
CSDE1-204ENST00000369530 CCDC90BQ9GZT6 254 aa6.35□□□□□ -1.39
CSDE1-204ENST00000369530 OR51E2Q9H255 320 aa6.35□□□□□ -1.39
CSDE1-204ENST00000369530 SLC32A1Q9H598 525 aa6.35□□□□□ -1.39
CSDE1-204ENST00000369530 TCF7L1Q9HCS4 588 aa6.35□□□□□ -1.39
CSDE1-204ENST00000369530 MYOZ1Q9NP98 299 aaPredicted RBP6.35□□□□□ -1.39
CSDE1-204ENST00000369530 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.35□□□□□ -1.39
CSDE1-204ENST00000369530 KCND3Q9UK17 655 aa6.35□□□□□ -1.39
CSDE1-204ENST00000369530 TP53TG5Q9Y2B4 290 aa6.35□□□□□ -1.39
CSDE1-204ENST00000369530 CCDC187A0A096LP49 1063 aa6.34□□□□□ -1.39
CSDE1-204ENST00000369530 STX11O75558 287 aa6.34□□□□□ -1.39
CSDE1-204ENST00000369530 HPP00738 406 aa6.34□□□□□ -1.39
CSDE1-204ENST00000369530 ANXA6P08133 673 aa6.34□□□□□ -1.39
CSDE1-204ENST00000369530 YBX1P67809 324 aaKnown RBP6.34□□□□□ -1.39
CSDE1-204ENST00000369530 SIM1P81133 766 aaPredicted RBP6.34□□□□□ -1.39
CSDE1-204ENST00000369530 TCEA2Q15560 299 aa6.34□□□□□ -1.39
CSDE1-204ENST00000369530 CEBPEQ15744 281 aa6.34□□□□□ -1.39
CSDE1-204ENST00000369530 CPSF6Q16630 551 aaKnown RBP eCLIP6.34□□□□□ -1.393e-7■□□□□ 8.6
CSDE1-204ENST00000369530 C18orf21Q32NC0 220 aaPredicted RBP6.34□□□□□ -1.39
CSDE1-204ENST00000369530 ZNF678Q5SXM1 525 aa6.34□□□□□ -1.39
CSDE1-204ENST00000369530 OTUD3Q5T2D3 398 aaPredicted RBP6.34□□□□□ -1.39
CSDE1-204ENST00000369530 C17orf107Q6ZR85 190 aa6.34□□□□□ -1.39
CSDE1-204ENST00000369530 CMIPQ8IY22 773 aa6.34□□□□□ -1.39
CSDE1-204ENST00000369530 ZNF655Q8N720 491 aaPredicted RBP6.34□□□□□ -1.39
CSDE1-204ENST00000369530 AMER3Q8N944 861 aa6.34□□□□□ -1.39
CSDE1-204ENST00000369530 Q8NA96 180 aa6.34□□□□□ -1.39
CSDE1-204ENST00000369530 ZNF540Q8NDQ6 660 aa6.34□□□□□ -1.39
CSDE1-204ENST00000369530 OR1S1Q8NH92 325 aa6.34□□□□□ -1.39
CSDE1-204ENST00000369530 SLC5A11Q8WWX8 675 aa6.34□□□□□ -1.39
CSDE1-204ENST00000369530 SLC25A46Q96AG3 418 aa6.34□□□□□ -1.39
CSDE1-204ENST00000369530 SLC22A18Q96BI1 424 aa6.34□□□□□ -1.39
CSDE1-204ENST00000369530 C7orf34Q96L11 122 aa6.34□□□□□ -1.39
CSDE1-204ENST00000369530 OR2A5Q96R48 311 aa6.34□□□□□ -1.39
CSDE1-204ENST00000369530 YIPF4Q9BSR8 244 aa6.34□□□□□ -1.39
CSDE1-204ENST00000369530 PDCD10Q9BUL8 212 aa6.34□□□□□ -1.39
CSDE1-204ENST00000369530 DPCDQ9BVM2 203 aaPredicted RBP6.34□□□□□ -1.39
CSDE1-204ENST00000369530 SLC29A3Q9BZD2 475 aa6.34□□□□□ -1.39
CSDE1-204ENST00000369530 BRINP2Q9C0B6 783 aa6.34□□□□□ -1.39
CSDE1-204ENST00000369530 ACTR8Q9H981 624 aa6.34□□□□□ -1.39
CSDE1-204ENST00000369530 CARS2Q9HA77 564 aaKnown RBP6.34□□□□□ -1.39
CSDE1-204ENST00000369530 V9GYQ6 96 aa6.34□□□□□ -1.39
CSDE1-204ENST00000369530 LOC101059948A0A1B0GTJ6 334 aa6.34□□□□□ -1.39
CSDE1-204ENST00000369530 A6NJY4 79 aa6.34□□□□□ -1.39
CSDE1-204ENST00000369530 IL1AP01583 271 aa6.34□□□□□ -1.39
CSDE1-204ENST00000369530 SEMG1P04279 462 aa6.34□□□□□ -1.39
CSDE1-204ENST00000369530 LPLP06858 475 aa6.34□□□□□ -1.39
CSDE1-204ENST00000369530 RNH1P13489 461 aaKnown RBP6.34□□□□□ -1.39
CSDE1-204ENST00000369530 UGT2B7P16662 529 aa6.34□□□□□ -1.39
CSDE1-204ENST00000369530 GABRB1P18505 474 aa6.34□□□□□ -1.39
CSDE1-204ENST00000369530 ARRB1P49407 418 aaPredicted RBP6.34□□□□□ -1.39
CSDE1-204ENST00000369530 RORCP51449 518 aa6.34□□□□□ -1.39
CSDE1-204ENST00000369530 IGLV3-21P80748 117 aaPredicted RBP6.34□□□□□ -1.39
CSDE1-204ENST00000369530 NFKB2Q00653 900 aa6.34□□□□□ -1.39
CSDE1-204ENST00000369530 FGFBP1Q14512 234 aa6.34□□□□□ -1.39
CSDE1-204ENST00000369530 UNC50Q53HI1 259 aa6.34□□□□□ -1.39
CSDE1-204ENST00000369530 OR2B11Q5JQS5 317 aa6.34□□□□□ -1.39
CSDE1-204ENST00000369530 THEM4Q5T1C6 240 aa6.34□□□□□ -1.39
CSDE1-204ENST00000369530 ATG9BQ674R7 924 aa6.34□□□□□ -1.39
CSDE1-204ENST00000369530 FBXO42Q6P3S6 717 aa6.34□□□□□ -1.39
CSDE1-204ENST00000369530 FAHD1Q6P587 224 aa6.34□□□□□ -1.39
CSDE1-204ENST00000369530 KLBQ86Z14 1044 aa6.34□□□□□ -1.39
CSDE1-204ENST00000369530 ZNF675Q8TD23 568 aa6.34□□□□□ -1.39
CSDE1-204ENST00000369530 L3HYPDHQ96EM0 354 aa6.34□□□□□ -1.39
CSDE1-204ENST00000369530 WDR77Q9BQA1 342 aaPredicted RBP6.34□□□□□ -1.39
CSDE1-204ENST00000369530 EVA1AQ9H8M9 152 aa6.34□□□□□ -1.39
CSDE1-204ENST00000369530 GALNT9Q9HCQ5 603 aa6.34□□□□□ -1.39
CSDE1-204ENST00000369530 LRIT1Q9P2V4 623 aa6.34□□□□□ -1.39
CSDE1-204ENST00000369530 FLNCQ14315 2725 aa6.34□□□□□ -1.39
CSDE1-204ENST00000369530 TMEM200CA6NKL6 621 aa6.34□□□□□ -1.4
CSDE1-204ENST00000369530 MYO1GB0I1T2 1018 aa6.34□□□□□ -1.4
CSDE1-204ENST00000369530 PDCD5O14737 125 aa6.34□□□□□ -1.4
CSDE1-204ENST00000369530 HPGDSO60760 199 aa6.34□□□□□ -1.4
CSDE1-204ENST00000369530 KERAO60938 352 aa6.34□□□□□ -1.4
CSDE1-204ENST00000369530 HEXBP07686 556 aa6.34□□□□□ -1.4
CSDE1-204ENST00000369530 LIPCP11150 499 aa6.34□□□□□ -1.4
CSDE1-204ENST00000369530 FMO3P31513 532 aa6.34□□□□□ -1.4
CSDE1-204ENST00000369530 FOXA1P55317 472 aa6.34□□□□□ -1.4
CSDE1-204ENST00000369530 GFERP55789 205 aa6.34□□□□□ -1.4
CSDE1-204ENST00000369530 SH3BP2P78314 561 aa6.34□□□□□ -1.4
CSDE1-204ENST00000369530 Q0VFX4 171 aa6.34□□□□□ -1.4
CSDE1-204ENST00000369530 LCP2Q13094 533 aa6.34□□□□□ -1.4
CSDE1-204ENST00000369530 ARHGAP19Q14CB8 494 aa6.34□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms