RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 U3KQV3 271 aa8.05□□□□□ -1.12
TPM3-213ENST00000368545 NINQ8N4C6 2090 aa8.04□□□□□ -1.12
TPM3-213ENST00000368545 VPS13AQ96RL7 3174 aa8.04□□□□□ -1.12
TPM3-213ENST00000368545 AKAP13Q12802 2813 aa8.04□□□□□ -1.12
TPM3-213ENST00000368545 ZNF785A8K8V0 405 aa8.04□□□□□ -1.12
TPM3-213ENST00000368545 DLGAP1O14490 977 aa8.04□□□□□ -1.12
TPM3-213ENST00000368545 DIRAS1O95057 198 aa8.04□□□□□ -1.12
TPM3-213ENST00000368545 IFNA16P05015 189 aa8.04□□□□□ -1.12
TPM3-213ENST00000368545 GUSBP08236 651 aa8.04□□□□□ -1.12
TPM3-213ENST00000368545 GYPEP15421 78 aa8.04□□□□□ -1.12
TPM3-213ENST00000368545 CDH2P19022 906 aaPredicted RBP8.04□□□□□ -1.12
TPM3-213ENST00000368545 PRKAR1BP31321 381 aa8.04□□□□□ -1.12
TPM3-213ENST00000368545 CAPGP40121 348 aa8.04□□□□□ -1.12
TPM3-213ENST00000368545 OR1E2P47887 323 aa8.04□□□□□ -1.12
TPM3-213ENST00000368545 RAD23AP54725 363 aa8.04□□□□□ -1.12
TPM3-213ENST00000368545 SPIBQ01892 262 aa8.04□□□□□ -1.12
TPM3-213ENST00000368545 IL11RAQ14626 422 aa8.04□□□□□ -1.12
TPM3-213ENST00000368545 EXOSC7Q15024 291 aaKnown RBP8.04□□□□□ -1.12
TPM3-213ENST00000368545 SLC36A3Q495N2 470 aa8.04□□□□□ -1.12
TPM3-213ENST00000368545 EIPR1Q53HC9 387 aa8.04□□□□□ -1.12
TPM3-213ENST00000368545 DCST2Q5T1A1 773 aa8.04□□□□□ -1.12
TPM3-213ENST00000368545 KRT80Q6KB66 452 aa8.04□□□□□ -1.12
TPM3-213ENST00000368545 TBPL2Q6SJ96 375 aa8.04□□□□□ -1.12
TPM3-213ENST00000368545 FRRS1Q6ZNA5 592 aa8.04□□□□□ -1.12
TPM3-213ENST00000368545 CARM1Q86X55 608 aa8.04□□□□□ -1.12
TPM3-213ENST00000368545 OR7G1Q8NGA0 311 aa8.04□□□□□ -1.12
TPM3-213ENST00000368545 GPR32P1Q8NGA4 272 aa8.04□□□□□ -1.12
TPM3-213ENST00000368545 NR4A3Q92570 626 aa8.04□□□□□ -1.12
TPM3-213ENST00000368545 CNBD2Q96M20 576 aa8.04□□□□□ -1.12
TPM3-213ENST00000368545 AMBRA1Q9C0C7 1298 aa8.04□□□□□ -1.12
TPM3-213ENST00000368545 ZNF350Q9GZX5 532 aa8.04□□□□□ -1.12
TPM3-213ENST00000368545 RNF32Q9H0A6 362 aa8.04□□□□□ -1.12
TPM3-213ENST00000368545 GHITMQ9H3K2 345 aa8.04□□□□□ -1.12
TPM3-213ENST00000368545 MTHFD2LQ9H903 347 aaPredicted RBP8.04□□□□□ -1.12
TPM3-213ENST00000368545 C14orf105Q9NVL8 296 aa8.04□□□□□ -1.12
TPM3-213ENST00000368545 VNN3Q9NY84 501 aa8.04□□□□□ -1.12
TPM3-213ENST00000368545 PRODH2Q9UF12 536 aa8.04□□□□□ -1.12
TPM3-213ENST00000368545 KCND3Q9UK17 655 aa8.04□□□□□ -1.12
TPM3-213ENST00000368545 WDR45Q9Y484 360 aa8.04□□□□□ -1.12
TPM3-213ENST00000368545 LYVE1Q9Y5Y7 322 aa8.04□□□□□ -1.12
TPM3-213ENST00000368545 KCNE3Q9Y6H6 103 aa8.04□□□□□ -1.12
TPM3-213ENST00000368545 PTPN13Q12923 2485 aa8.04□□□□□ -1.12
TPM3-213ENST00000368545 MYO9AB2RTY4 2548 aa8.04□□□□□ -1.12
TPM3-213ENST00000368545 CCDC187A0A096LP49 1063 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 IGKV3D-11A0A0A0MRZ8 115 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 MYOCOSA0A1B0GUC4 107 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 TNFRSF11BO00300 401 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 CSO75390 466 aaKnown RBP8.03□□□□□ -1.12
TPM3-213ENST00000368545 STX11O75558 287 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 SCRG1O75711 98 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 NKX2-2O95096 273 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 LGI1O95970 557 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 TNFRSF1BP20333 461 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 S1PR1P21453 382 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 MST1P26927 711 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 CSTF2P33240 577 aaKnown RBP eCLIP8.03□□□□□ -1.12
TPM3-213ENST00000368545 CHN2P52757 468 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 PDX1P52945 283 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 SMIM11AP58511 58 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 FUT7Q11130 342 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 MFSD4BQ5TF39 518 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 AP1ARQ63HQ0 302 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 DHRS4L2Q6PKH6 230 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 TIPARPQ7Z3E1 657 aaKnown RBP8.03□□□□□ -1.12
TPM3-213ENST00000368545 TMEM179BQ7Z7N9 219 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 PEX5LQ8IYB4 626 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 AGBL5Q8NDL9 886 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 GPR151Q8TDV0 419 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 CYGBQ8WWM9 190 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 ART5Q96L15 291 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 SDF2Q99470 211 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 PSD2Q9BQI7 771 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 EVA1AQ9H8M9 152 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 FOLH1BQ9HBA9 442 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 KRT84Q9NSB2 600 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 RLIMQ9NVW2 624 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 KLHL28Q9NXS3 571 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 PDP1Q9P0J1 537 aaPredicted RBP8.03□□□□□ -1.12
TPM3-213ENST00000368545 CFL2Q9Y281 166 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 IGLV3-12A0A075B6K2 115 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 ARRDC5A6NEK1 342 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 M0QYG6 137 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 HS6ST1O60243 411 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 KIAA0513O60268 411 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 GADD45GO95257 159 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 TNFAIP8O95379 198 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 SNAP29O95721 258 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 LIPCP11150 499 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 FGF5P12034 268 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 MYF6P23409 242 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 IGFBP5P24593 272 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 RORAP35398 523 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 KIR2DL3P43628 341 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 EMDP50402 254 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 HMGA2P52926 109 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 RHAGQ02094 409 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 ZFP36L1Q07352 338 aaKnown RBP8.03□□□□□ -1.12
TPM3-213ENST00000368545 LARS2Q15031 903 aaKnown RBP8.03□□□□□ -1.12
TPM3-213ENST00000368545 ELAVL1Q15717 326 aaKnown RBP8.03□□□□□ -1.12
TPM3-213ENST00000368545 BTBD16Q32M84 506 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms