RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 TRAPPC13A5PLN9 417 aa11.07□□□□□ -0.64
USF1-203ENST00000368021 OR6C70A6NIJ9 312 aa11.07□□□□□ -0.64
USF1-203ENST00000368021 E9PQ18 207 aa11.07□□□□□ -0.64
USF1-203ENST00000368021 SCDO00767 359 aa11.07□□□□□ -0.64
USF1-203ENST00000368021 PRKNO60260 465 aaPredicted RBP11.07□□□□□ -0.64
USF1-203ENST00000368021 OR10H3O60404 316 aa11.07□□□□□ -0.64
USF1-203ENST00000368021 BCAS1O75363 584 aaPredicted RBP11.07□□□□□ -0.64
USF1-203ENST00000368021 REM1O75628 298 aa11.07□□□□□ -0.64
USF1-203ENST00000368021 ZFAND5O76080 213 aa11.07□□□□□ -0.64
USF1-203ENST00000368021 UTS2O95399 124 aa11.07□□□□□ -0.64
USF1-203ENST00000368021 GKN3PP0CG01 181 aa11.07□□□□□ -0.64
USF1-203ENST00000368021 HPGDP15428 266 aa11.07□□□□□ -0.64
USF1-203ENST00000368021 TCN2P20062 427 aa11.07□□□□□ -0.64
USF1-203ENST00000368021 TCEA1P23193 301 aaKnown RBP11.07□□□□□ -0.64
USF1-203ENST00000368021 HTR2AP28223 471 aa11.07□□□□□ -0.64
USF1-203ENST00000368021 BMXP51813 675 aa11.07□□□□□ -0.64
USF1-203ENST00000368021 HOXC5Q00444 222 aa11.07□□□□□ -0.64
USF1-203ENST00000368021 NPRL3Q12980 569 aa11.07□□□□□ -0.64
USF1-203ENST00000368021 KEAP1Q14145 624 aa11.07□□□□□ -0.64
USF1-203ENST00000368021 EXT1Q16394 746 aa11.07□□□□□ -0.64
USF1-203ENST00000368021 FNDC7Q5VTL7 733 aa11.07□□□□□ -0.64
USF1-203ENST00000368021 ZNF613Q6PF04 617 aa11.07□□□□□ -0.64
USF1-203ENST00000368021 GALNT5Q7Z7M9 940 aa11.07□□□□□ -0.64
USF1-203ENST00000368021 GALNT11Q8NCW6 608 aa11.07□□□□□ -0.64
USF1-203ENST00000368021 SNIP1Q8TAD8 396 aaKnown RBP11.07□□□□□ -0.64
USF1-203ENST00000368021 ELP5Q8TE02 316 aa11.07□□□□□ -0.64
USF1-203ENST00000368021 OMA1Q96E52 524 aa11.07□□□□□ -0.64
USF1-203ENST00000368021 SLC41A3Q96GZ6 507 aa11.07□□□□□ -0.64
USF1-203ENST00000368021 ADOQ96SZ5 270 aa11.07□□□□□ -0.64
USF1-203ENST00000368021 NIPSNAP1Q9BPW8 284 aa11.07□□□□□ -0.64
USF1-203ENST00000368021 PRR14Q9BWN1 585 aa11.07□□□□□ -0.64
USF1-203ENST00000368021 EXOSC3Q9NQT5 275 aaKnown RBP11.07□□□□□ -0.64
USF1-203ENST00000368021 TCFL5Q9UL49 500 aa11.07□□□□□ -0.64
USF1-203ENST00000368021 NOSIPQ9Y314 301 aaKnown RBP11.07□□□□□ -0.64
USF1-203ENST00000368021 A0A1W2PQD3 144 aa11.06□□□□□ -0.64
USF1-203ENST00000368021 CDC14CA4D256 554 aa11.06□□□□□ -0.64
USF1-203ENST00000368021 TMEM200CA6NKL6 621 aa11.06□□□□□ -0.64
USF1-203ENST00000368021 C21orf140B9A014 251 aa11.06□□□□□ -0.64
USF1-203ENST00000368021 STMND1H3BQB6 276 aa11.06□□□□□ -0.64
USF1-203ENST00000368021 CSTAP01040 98 aa11.06□□□□□ -0.64
USF1-203ENST00000368021 GASTP01350 101 aa11.06□□□□□ -0.64
USF1-203ENST00000368021 KRT8P05787 483 aa11.06□□□□□ -0.64
USF1-203ENST00000368021 COX6A1P12074 109 aa11.06□□□□□ -0.64
USF1-203ENST00000368021 CYP4B1P13584 511 aa11.06□□□□□ -0.64
USF1-203ENST00000368021 PRG2P13727 222 aa11.06□□□□□ -0.64
USF1-203ENST00000368021 NAGAP17050 411 aa11.06□□□□□ -0.64
USF1-203ENST00000368021 IFNGR2P38484 337 aa11.06□□□□□ -0.64
USF1-203ENST00000368021 ACAA2P42765 397 aaKnown RBP11.06□□□□□ -0.64
USF1-203ENST00000368021 BLVRAP53004 296 aa11.06□□□□□ -0.64
USF1-203ENST00000368021 P2RX3P56373 397 aa11.06□□□□□ -0.64
USF1-203ENST00000368021 SRSF6Q13247 344 aaKnown RBP11.06□□□□□ -0.64
USF1-203ENST00000368021 OR1Q1Q15612 314 aa11.06□□□□□ -0.64
USF1-203ENST00000368021 PLAG1Q6DJT9 500 aa11.06□□□□□ -0.64
USF1-203ENST00000368021 PGBD2Q6P3X8 592 aa11.06□□□□□ -0.64
USF1-203ENST00000368021 C19orf48Q6RUI8 117 aa11.06□□□□□ -0.64
USF1-203ENST00000368021 CD300LDQ6UXZ3 194 aa11.06□□□□□ -0.64
USF1-203ENST00000368021 LRRC69Q6ZNQ3 347 aa11.06□□□□□ -0.64
USF1-203ENST00000368021 USP43Q70EL4 1123 aa11.06□□□□□ -0.64
USF1-203ENST00000368021 GDF7Q7Z4P5 450 aa11.06□□□□□ -0.64
USF1-203ENST00000368021 SPACA3Q8IXA5 215 aa11.06□□□□□ -0.64
USF1-203ENST00000368021 ASCC1Q8N9N2 400 aaKnown RBP11.06□□□□□ -0.64
USF1-203ENST00000368021 OR4K5Q8NGD3 323 aa11.06□□□□□ -0.64
USF1-203ENST00000368021 CT55Q8WUE5 264 aa11.06□□□□□ -0.64
USF1-203ENST00000368021 ACOT11Q8WXI4 607 aaPredicted RBP11.06□□□□□ -0.64
USF1-203ENST00000368021 IMMP1LQ96LU5 166 aa11.06□□□□□ -0.64
USF1-203ENST00000368021 MUS81Q96NY9 551 aa11.06□□□□□ -0.64
USF1-203ENST00000368021 GPR87Q9BY21 358 aa11.06□□□□□ -0.64
USF1-203ENST00000368021 TRIM2Q9C040 744 aa11.06□□□□□ -0.64
USF1-203ENST00000368021 RIBC2Q9H4K1 309 aa11.06□□□□□ -0.64
USF1-203ENST00000368021 CTPS2Q9NRF8 586 aa11.06□□□□□ -0.64
USF1-203ENST00000368021 RYDENQ9NUL5 291 aaKnown RBP11.06□□□□□ -0.64
USF1-203ENST00000368021 NDRG4Q9ULP0 352 aaKnown RBP11.06□□□□□ -0.64
USF1-203ENST00000368021 PCDHGB5Q9Y5G0 923 aa11.06□□□□□ -0.64
USF1-203ENST00000368021 HSPE1-MOB4S4R3N1 261 aa11.06□□□□□ -0.64
USF1-203ENST00000368021 A0A087WUU8 490 aa11.05□□□□□ -0.64
USF1-203ENST00000368021 ALG1L2C9J202 215 aa11.05□□□□□ -0.64
USF1-203ENST00000368021 H3BMQ9 156 aa11.05□□□□□ -0.64
USF1-203ENST00000368021 BCKDKO14874 412 aa11.05□□□□□ -0.64
USF1-203ENST00000368021 ICMTO60725 284 aa11.05□□□□□ -0.64
USF1-203ENST00000368021 ICOSLGO75144 302 aa11.05□□□□□ -0.64
USF1-203ENST00000368021 CLIC3O95833 236 aa11.05□□□□□ -0.64
USF1-203ENST00000368021 THY1P04216 161 aa11.05□□□□□ -0.64
USF1-203ENST00000368021 POLR2IP36954 125 aaKnown RBP11.05□□□□□ -0.64
USF1-203ENST00000368021 UGT2B15P54855 530 aa11.05□□□□□ -0.64
USF1-203ENST00000368021 RPS15P62841 145 aaKnown RBP11.05□□□□□ -0.64
USF1-203ENST00000368021 IL1RL1Q01638 556 aa11.05□□□□□ -0.64
USF1-203ENST00000368021 COX10Q12887 443 aa11.05□□□□□ -0.64
USF1-203ENST00000368021 ITGADQ13349 1161 aa11.05□□□□□ -0.64
USF1-203ENST00000368021 EFR3AQ14156 821 aa11.05□□□□□ -0.64
USF1-203ENST00000368021 SSPNQ14714 243 aa11.05□□□□□ -0.64
USF1-203ENST00000368021 FAM69BQ5VUD6 431 aa11.05□□□□□ -0.64
USF1-203ENST00000368021 C1orf94Q6P1W5 598 aa11.05□□□□□ -0.64
USF1-203ENST00000368021 KIRREL2Q6UWL6 708 aa11.05□□□□□ -0.64
USF1-203ENST00000368021 RFPL4BQ6ZWI9 263 aa11.05□□□□□ -0.64
USF1-203ENST00000368021 VASH2Q86V25 355 aa11.05□□□□□ -0.64
USF1-203ENST00000368021 PRR22Q8IZ63 422 aa11.05□□□□□ -0.64
USF1-203ENST00000368021 C8orf59Q8N0T1 100 aaPredicted RBP11.05□□□□□ -0.64
USF1-203ENST00000368021 NLGN4XQ8N0W4 816 aa11.05□□□□□ -0.64
USF1-203ENST00000368021 IL22RA1Q8N6P7 574 aa11.05□□□□□ -0.64
USF1-203ENST00000368021 NLGN4YQ8NFZ3 816 aaPredicted RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms