RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 DIRAS1O95057 198 aa13.43□□□□□ -0.26
CCNE1-202ENST00000357943 ZNF17P17021 662 aa13.43□□□□□ -0.26
CCNE1-202ENST00000357943 ADH6P28332 368 aa13.43□□□□□ -0.26
CCNE1-202ENST00000357943 CDH12P55289 794 aa13.43□□□□□ -0.26
CCNE1-202ENST00000357943 ACTR3P61158 418 aa13.43□□□□□ -0.26
CCNE1-202ENST00000357943 RIPK1Q13546 671 aa13.43□□□□□ -0.26
CCNE1-202ENST00000357943 FAM98BQ52LJ0 330 aaKnown RBP13.43□□□□□ -0.26
CCNE1-202ENST00000357943 ALG10BQ5I7T1 473 aa13.43□□□□□ -0.26
CCNE1-202ENST00000357943 ADGRG3Q86Y34 549 aa13.43□□□□□ -0.26
CCNE1-202ENST00000357943 RELTQ969Z4 430 aa13.43□□□□□ -0.26
CCNE1-202ENST00000357943 SLCO4A1Q96BD0 722 aa13.43□□□□□ -0.26
CCNE1-202ENST00000357943 ZNF300Q96RE9 604 aaPredicted RBP13.43□□□□□ -0.26
CCNE1-202ENST00000357943 MAGIXQ9H6Y5 334 aa13.43□□□□□ -0.26
CCNE1-202ENST00000357943 EXO5Q9H790 373 aa13.43□□□□□ -0.26
CCNE1-202ENST00000357943 TMEM185BQ9H7F4 350 aa13.43□□□□□ -0.26
CCNE1-202ENST00000357943 SPRR3Q9UBC9 169 aa13.43□□□□□ -0.26
CCNE1-202ENST00000357943 RPS6KB2Q9UBS0 482 aa13.43□□□□□ -0.26
CCNE1-202ENST00000357943 ENPP4Q9Y6X5 453 aa13.43□□□□□ -0.26
CCNE1-202ENST00000357943 FREM3P0C091 2139 aa13.43□□□□□ -0.26
CCNE1-202ENST00000357943 ZNF407Q9C0G0 2248 aa13.43□□□□□ -0.26
CCNE1-202ENST00000357943 A0A1B0GTH9 108 aa13.42□□□□□ -0.26
CCNE1-202ENST00000357943 A0A1B0GVC2 190 aa13.42□□□□□ -0.26
CCNE1-202ENST00000357943 SUSD5O60279 629 aa13.42□□□□□ -0.26
CCNE1-202ENST00000357943 HCN1O60741 890 aa13.42□□□□□ -0.26
CCNE1-202ENST00000357943 PRSS23O95084 383 aa13.42□□□□□ -0.26
CCNE1-202ENST00000357943 OPN1LWP04000 364 aa13.42□□□□□ -0.26
CCNE1-202ENST00000357943 FABP3P05413 133 aa13.42□□□□□ -0.26
CCNE1-202ENST00000357943 GPIP06744 558 aa13.42□□□□□ -0.26
CCNE1-202ENST00000357943 UMPSP11172 480 aa13.42□□□□□ -0.26
CCNE1-202ENST00000357943 PEPDP12955 493 aa13.42□□□□□ -0.26
CCNE1-202ENST00000357943 MAGEA2P43356 314 aa13.42□□□□□ -0.26
CCNE1-202ENST00000357943 STARP49675 285 aa13.42□□□□□ -0.26
CCNE1-202ENST00000357943 POLR2HP52434 150 aaKnown RBP13.42□□□□□ -0.26
CCNE1-202ENST00000357943 TAS2R41P59536 307 aa13.42□□□□□ -0.26
CCNE1-202ENST00000357943 CHRNB3Q05901 458 aa13.42□□□□□ -0.26
CCNE1-202ENST00000357943 FOXD4Q12950 439 aaPredicted RBP13.42□□□□□ -0.26
CCNE1-202ENST00000357943 DCST1Q5T197 706 aa13.42□□□□□ -0.26
CCNE1-202ENST00000357943 AAGABQ6PD74 315 aa13.42□□□□□ -0.26
CCNE1-202ENST00000357943 ZNF613Q6PF04 617 aa13.42□□□□□ -0.26
CCNE1-202ENST00000357943 ATG4DQ86TL0 474 aaPredicted RBP13.42□□□□□ -0.26
CCNE1-202ENST00000357943 ZDHHC21Q8IVQ6 265 aa13.42□□□□□ -0.26
CCNE1-202ENST00000357943 POP5Q969H6 163 aaKnown RBP13.42□□□□□ -0.26
CCNE1-202ENST00000357943 SLC41A3Q96GZ6 507 aa13.42□□□□□ -0.26
CCNE1-202ENST00000357943 RSRC1Q96IZ7 334 aaKnown RBP13.42□□□□□ -0.26
CCNE1-202ENST00000357943 PRRC1Q96M27 445 aa13.42□□□□□ -0.26
CCNE1-202ENST00000357943 RHCGQ9UBD6 479 aa13.42□□□□□ -0.26
CCNE1-202ENST00000357943 CHD6Q8TD26 2715 aa13.42□□□□□ -0.26
CCNE1-202ENST00000357943 TMED7-TICAM2A0A0A6YYA0 188 aa13.42□□□□□ -0.26
CCNE1-202ENST00000357943 TRAPPC13A5PLN9 417 aa13.42□□□□□ -0.26
CCNE1-202ENST00000357943 C1QL1O75973 258 aa13.42□□□□□ -0.26
CCNE1-202ENST00000357943 RAP2AP10114 183 aa13.42□□□□□ -0.26
CCNE1-202ENST00000357943 BMP7P18075 431 aa13.42□□□□□ -0.26
CCNE1-202ENST00000357943 CCNA2P20248 432 aa13.42□□□□□ -0.26
CCNE1-202ENST00000357943 CHMP24386 653 aa13.42□□□□□ -0.26
CCNE1-202ENST00000357943 APOBEC1P41238 236 aaKnown RBP13.42□□□□□ -0.26
CCNE1-202ENST00000357943 HTR3AP46098 478 aa13.42□□□□□ -0.26
CCNE1-202ENST00000357943 KRTCAP3Q53RY4 240 aa13.42□□□□□ -0.26
CCNE1-202ENST00000357943 NHSL2Q5HYW2 709 aa13.42□□□□□ -0.26
CCNE1-202ENST00000357943 ULK3Q6PHR2 472 aa13.42□□□□□ -0.26
CCNE1-202ENST00000357943 GDF7Q7Z4P5 450 aa13.42□□□□□ -0.26
CCNE1-202ENST00000357943 FGD2Q7Z6J4 655 aa13.42□□□□□ -0.26
CCNE1-202ENST00000357943 CHERPQ8IWX8 916 aaKnown RBP13.42□□□□□ -0.26
CCNE1-202ENST00000357943 GHDCQ8N2G8 530 aa13.42□□□□□ -0.26
CCNE1-202ENST00000357943 ZNF843Q8N446 348 aa13.42□□□□□ -0.26
CCNE1-202ENST00000357943 ATP6V1C2Q8NEY4 427 aa13.42□□□□□ -0.26
CCNE1-202ENST00000357943 RNF217Q8TC41 542 aa13.42□□□□□ -0.26
CCNE1-202ENST00000357943 DNAJA4Q8WW22 397 aaPredicted RBP13.42□□□□□ -0.26
CCNE1-202ENST00000357943 ABTB1Q969K4 478 aaPredicted RBP13.42□□□□□ -0.26
CCNE1-202ENST00000357943 CHID1Q9BWS9 393 aa13.42□□□□□ -0.26
CCNE1-202ENST00000357943 CHRNA9Q9UGM1 479 aa13.42□□□□□ -0.26
CCNE1-202ENST00000357943 RIMS3Q9UJD0 308 aa13.42□□□□□ -0.26
CCNE1-202ENST00000357943 ACAD8Q9UKU7 415 aa13.42□□□□□ -0.26
CCNE1-202ENST00000357943 SLC7A7Q9UM01 511 aa13.42□□□□□ -0.26
CCNE1-202ENST00000357943 TMED7Q9Y3B3 224 aa13.42□□□□□ -0.26
CCNE1-202ENST00000357943 AQP7O14520 342 aa13.41□□□□□ -0.26
CCNE1-202ENST00000357943 OR5F1O95221 314 aa13.41□□□□□ -0.26
CCNE1-202ENST00000357943 LYPD3O95274 346 aa13.41□□□□□ -0.26
CCNE1-202ENST00000357943 ITGA2P17301 1181 aa13.41□□□□□ -0.26
CCNE1-202ENST00000357943 RHCEP18577 417 aa13.41□□□□□ -0.26
CCNE1-202ENST00000357943 ELK4P28324 431 aa13.41□□□□□ -0.26
CCNE1-202ENST00000357943 SHC1P29353 583 aa13.41□□□□□ -0.26
CCNE1-202ENST00000357943 LHX2P50458 406 aa13.41□□□□□ -0.26
CCNE1-202ENST00000357943 CRYZQ08257 329 aaKnown RBP13.41□□□□□ -0.26
CCNE1-202ENST00000357943 VASNQ6EMK4 673 aa13.41□□□□□ -0.26
CCNE1-202ENST00000357943 C3orf33Q6P1S2 294 aa13.41□□□□□ -0.26
CCNE1-202ENST00000357943 ARHGAP11AQ6P4F7 1023 aa13.41□□□□□ -0.26
CCNE1-202ENST00000357943 WDR88Q6ZMY6 472 aa13.41□□□□□ -0.26
CCNE1-202ENST00000357943 PIWIL3Q7Z3Z3 882 aaKnown RBP13.41□□□□□ -0.26
CCNE1-202ENST00000357943 LILRA2Q8N149 483 aa13.41□□□□□ -0.26
CCNE1-202ENST00000357943 SMPDL3BQ92485 455 aa13.41□□□□□ -0.26
CCNE1-202ENST00000357943 SLC38A4Q969I6 547 aa13.41□□□□□ -0.26
CCNE1-202ENST00000357943 TIMP4Q99727 224 aa13.41□□□□□ -0.26
CCNE1-202ENST00000357943 POLR2J2Q9GZM3 115 aaKnown RBP13.41□□□□□ -0.26
CCNE1-202ENST00000357943 POLR2J3Q9H1A7 115 aaKnown RBP13.41□□□□□ -0.26
CCNE1-202ENST00000357943 CCM2LQ9NUG4 571 aaPredicted RBP13.41□□□□□ -0.26
CCNE1-202ENST00000357943 FAM32AQ9Y421 112 aaKnown RBP13.41□□□□□ -0.26
CCNE1-202ENST00000357943 COL6A6A6NMZ7 2263 aa13.41□□□□□ -0.26
CCNE1-202ENST00000357943 SVILO95425 2214 aa13.4□□□□□ -0.26
CCNE1-202ENST00000357943 A0A087WUJ7 227 aa13.4□□□□□ -0.26
CCNE1-202ENST00000357943 TMEM72A0PK05 275 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms