RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 TMEM99Q8N816 258 aa9.88□□□□□ -0.83
CAPN3-205ENST00000357568 BMPERQ8N8U9 685 aa9.88□□□□□ -0.83
CAPN3-205ENST00000357568 TMIEQ8NEW7 156 aa9.88□□□□□ -0.83
CAPN3-205ENST00000357568 BEST4Q8NFU0 473 aa9.88□□□□□ -0.83
CAPN3-205ENST00000357568 PCNPQ8WW12 178 aaKnown RBP9.88□□□□□ -0.83
CAPN3-205ENST00000357568 PCBD2Q9H0N5 130 aa9.88□□□□□ -0.83
CAPN3-205ENST00000357568 UBQLN3Q9H347 655 aa9.88□□□□□ -0.83
CAPN3-205ENST00000357568 GLIPR2Q9H4G4 154 aa9.88□□□□□ -0.83
CAPN3-205ENST00000357568 ZCCHC3Q9NUD5 404 aaKnown RBP9.88□□□□□ -0.83
CAPN3-205ENST00000357568 TDP1Q9NUW8 608 aa9.88□□□□□ -0.83
CAPN3-205ENST00000357568 OBP2AQ9NY56 170 aa9.88□□□□□ -0.83
CAPN3-205ENST00000357568 TRPC4Q9UBN4 977 aa9.88□□□□□ -0.83
CAPN3-205ENST00000357568 PRR23D1E9PI22 279 aaPredicted RBP9.87□□□□□ -0.83
CAPN3-205ENST00000357568 KRT33AO76009 404 aa9.87□□□□□ -0.83
CAPN3-205ENST00000357568 PRR23D2P0DMB1 279 aaPredicted RBP9.87□□□□□ -0.83
CAPN3-205ENST00000357568 CEBPBP17676 345 aa9.87□□□□□ -0.83
CAPN3-205ENST00000357568 NT5EP21589 574 aa9.87□□□□□ -0.83
CAPN3-205ENST00000357568 MAT2AP31153 395 aaKnown RBP9.87□□□□□ -0.83
CAPN3-205ENST00000357568 GCGRP47871 477 aa9.87□□□□□ -0.83
CAPN3-205ENST00000357568 TAS2R38P59533 333 aa9.87□□□□□ -0.83
CAPN3-205ENST00000357568 PSMA6P60900 246 aaKnown RBP9.87□□□□□ -0.83
CAPN3-205ENST00000357568 ILF3Q12906 894 aaKnown RBP eCLIP9.87□□□□□ -0.83
CAPN3-205ENST00000357568 ZSWIM7Q19AV6 140 aa9.87□□□□□ -0.83
CAPN3-205ENST00000357568 RNF113BQ8IZP6 322 aaKnown RBP9.87□□□□□ -0.83
CAPN3-205ENST00000357568 OR1S1Q8NH92 325 aa9.87□□□□□ -0.83
CAPN3-205ENST00000357568 GANCQ8TET4 914 aa9.87□□□□□ -0.83
CAPN3-205ENST00000357568 THEM6Q8WUY1 208 aa9.87□□□□□ -0.83
CAPN3-205ENST00000357568 THAP4Q8WY91 577 aa9.87□□□□□ -0.83
CAPN3-205ENST00000357568 TCEAL4Q96EI5 215 aa9.87□□□□□ -0.83
CAPN3-205ENST00000357568 ZNF514Q96K75 400 aaPredicted RBP9.87□□□□□ -0.83
CAPN3-205ENST00000357568 ZFP3Q96NJ6 502 aa9.87□□□□□ -0.83
CAPN3-205ENST00000357568 NPAS1Q99742 590 aa9.87□□□□□ -0.83
CAPN3-205ENST00000357568 PHF7Q9BWX1 381 aaPredicted RBP9.87□□□□□ -0.83
CAPN3-205ENST00000357568 TEX10Q9NXF1 929 aaPredicted RBP9.87□□□□□ -0.83
CAPN3-205ENST00000357568 NDRG3Q9UGV2 375 aa9.87□□□□□ -0.83
CAPN3-205ENST00000357568 GMEB2Q9UKD1 530 aa9.87□□□□□ -0.83
CAPN3-205ENST00000357568 COPS3Q9UNS2 423 aa9.87□□□□□ -0.83
CAPN3-205ENST00000357568 ANKRD20A5PA0PJZ0 165 aa9.87□□□□□ -0.83
CAPN3-205ENST00000357568 HPP00738 406 aa9.87□□□□□ -0.83
CAPN3-205ENST00000357568 PDHA2P29803 388 aa9.87□□□□□ -0.83
CAPN3-205ENST00000357568 VEGFCP49767 419 aa9.87□□□□□ -0.83
CAPN3-205ENST00000357568 SCRN3Q0VDG4 424 aa9.87□□□□□ -0.83
CAPN3-205ENST00000357568 TMEM220Q6QAJ8 160 aa9.87□□□□□ -0.83
CAPN3-205ENST00000357568 DNM1P46Q6ZS02 220 aa9.87□□□□□ -0.83
CAPN3-205ENST00000357568 Q6ZVL8 140 aa9.87□□□□□ -0.83
CAPN3-205ENST00000357568 SYS1Q8N2H4 156 aa9.87□□□□□ -0.83
CAPN3-205ENST00000357568 MEIOBQ8N635 442 aa9.87□□□□□ -0.83
CAPN3-205ENST00000357568 OR52L1Q8NGH7 329 aa9.87□□□□□ -0.83
CAPN3-205ENST00000357568 OR6K3Q8NGY3 331 aa9.87□□□□□ -0.83
CAPN3-205ENST00000357568 CNOT9Q92600 299 aaKnown RBP9.87□□□□□ -0.83
CAPN3-205ENST00000357568 NSMAFQ92636 917 aa9.87□□□□□ -0.83
CAPN3-205ENST00000357568 ATOH1Q92858 354 aaPredicted RBP9.87□□□□□ -0.83
CAPN3-205ENST00000357568 FOXJ1Q92949 421 aa9.87□□□□□ -0.83
CAPN3-205ENST00000357568 EXOSC8Q96B26 276 aaKnown RBP9.87□□□□□ -0.83
CAPN3-205ENST00000357568 LRFN5Q96NI6 719 aa9.87□□□□□ -0.83
CAPN3-205ENST00000357568 SORBS1Q9BX66 1292 aaKnown RBP9.87□□□□□ -0.83
CAPN3-205ENST00000357568 GSDMCQ9BYG8 508 aa9.87□□□□□ -0.83
CAPN3-205ENST00000357568 SLC35C2Q9NQQ7 365 aa9.87□□□□□ -0.83
CAPN3-205ENST00000357568 CMC2Q9NRP2 79 aa9.87□□□□□ -0.83
CAPN3-205ENST00000357568 ST6GALNAC2Q9UJ37 374 aa9.87□□□□□ -0.83
CAPN3-205ENST00000357568 ZMIZ1Q9ULJ6 1067 aa9.87□□□□□ -0.83
CAPN3-205ENST00000357568 FAM86C2PA6NEL3 165 aa9.86□□□□□ -0.83
CAPN3-205ENST00000357568 BHLHE40O14503 412 aa9.86□□□□□ -0.83
CAPN3-205ENST00000357568 SIGLEC6O43699 453 aa9.86□□□□□ -0.83
CAPN3-205ENST00000357568 LILRB5O75023 590 aa9.86□□□□□ -0.83
CAPN3-205ENST00000357568 SDC3O75056 442 aa9.86□□□□□ -0.83
CAPN3-205ENST00000357568 TOXO94900 526 aa9.86□□□□□ -0.83
CAPN3-205ENST00000357568 NDUFB6O95139 128 aa9.86□□□□□ -0.83
CAPN3-205ENST00000357568 RAB40ALP0C0E4 278 aa9.86□□□□□ -0.83
CAPN3-205ENST00000357568 RPA2P15927 270 aa9.86□□□□□ -0.83
CAPN3-205ENST00000357568 ACADLP28330 430 aa9.86□□□□□ -0.83
CAPN3-205ENST00000357568 PTCRAQ6ISU1 281 aaPredicted RBP9.86□□□□□ -0.83
CAPN3-205ENST00000357568 UNQ9370/PRO34162Q6UXP9 181 aa9.86□□□□□ -0.83
CAPN3-205ENST00000357568 GSG1LQ6UXU4 331 aa9.86□□□□□ -0.83
CAPN3-205ENST00000357568 LILRA3Q8N6C8 439 aaPredicted RBP9.86□□□□□ -0.83
CAPN3-205ENST00000357568 OR5D16Q8NGK9 328 aa9.86□□□□□ -0.83
CAPN3-205ENST00000357568 RAB40AQ8WXH6 277 aa9.86□□□□□ -0.83
CAPN3-205ENST00000357568 NXPE3Q969Y0 559 aa9.86□□□□□ -0.83
CAPN3-205ENST00000357568 MRPS24Q96EL2 167 aaKnown RBP9.86□□□□□ -0.83
CAPN3-205ENST00000357568 SLC41A3Q96GZ6 507 aa9.86□□□□□ -0.83
CAPN3-205ENST00000357568 UCN2Q96RP3 112 aa9.86□□□□□ -0.83
CAPN3-205ENST00000357568 KCNK12Q9HB15 430 aa9.86□□□□□ -0.83
CAPN3-205ENST00000357568 LHX9Q9NQ69 397 aa9.86□□□□□ -0.83
CAPN3-205ENST00000357568 IL20RAQ9UHF4 553 aa9.86□□□□□ -0.83
CAPN3-205ENST00000357568 PURGQ9UJV8 347 aaKnown RBP9.86□□□□□ -0.83
CAPN3-205ENST00000357568 CKAP5Q14008 2032 aa9.86□□□□□ -0.83
CAPN3-205ENST00000357568 MYO9BQ13459 2157 aa9.86□□□□□ -0.83
CAPN3-205ENST00000357568 A0A0A6YYD5 115 aa9.86□□□□□ -0.83
CAPN3-205ENST00000357568 UNC119BA6NIH7 251 aa9.86□□□□□ -0.83
CAPN3-205ENST00000357568 CH25HO95992 272 aa9.86□□□□□ -0.83
CAPN3-205ENST00000357568 ATP5A1P25705 553 aaKnown RBP9.86□□□□□ -0.83
CAPN3-205ENST00000357568 HAAOP46952 286 aa9.86□□□□□ -0.83
CAPN3-205ENST00000357568 GMFBP60983 142 aa9.86□□□□□ -0.83
CAPN3-205ENST00000357568 FGL1Q08830 312 aa9.86□□□□□ -0.83
CAPN3-205ENST00000357568 PLBD1Q6P4A8 553 aa9.86□□□□□ -0.83
CAPN3-205ENST00000357568 MTSS1LQ765P7 747 aa9.86□□□□□ -0.83
CAPN3-205ENST00000357568 GDF7Q7Z4P5 450 aa9.86□□□□□ -0.83
CAPN3-205ENST00000357568 C17orf64Q86WR6 236 aa9.86□□□□□ -0.83
CAPN3-205ENST00000357568 CMTM8Q8IZV2 173 aa9.86□□□□□ -0.83
CAPN3-205ENST00000357568 ZNF454Q8N9F8 522 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms