RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 EXT1Q16394 746 aa5.19□□□□□ -1.58
PTPRD-202ENST00000356435 AADACL3Q5VUY0 350 aa5.19□□□□□ -1.58
PTPRD-202ENST00000356435 LCN8Q6JVE9 175 aa5.19□□□□□ -1.58
PTPRD-202ENST00000356435 KCNIP4Q6PIL6 250 aa5.19□□□□□ -1.58
PTPRD-202ENST00000356435 PRICKLE2Q7Z3G6 844 aa5.19□□□□□ -1.58
PTPRD-202ENST00000356435 ASCC1Q8N9N2 400 aaKnown RBP5.19□□□□□ -1.58
PTPRD-202ENST00000356435 OR7G2Q8NG99 324 aa5.19□□□□□ -1.58
PTPRD-202ENST00000356435 OR5W2Q8NH69 310 aa5.19□□□□□ -1.58
PTPRD-202ENST00000356435 CDS1Q92903 461 aa5.19□□□□□ -1.58
PTPRD-202ENST00000356435 MIB2Q96AX9 1013 aa5.19□□□□□ -1.58
PTPRD-202ENST00000356435 DTD2Q96FN9 168 aa5.19□□□□□ -1.58
PTPRD-202ENST00000356435 SAMD8Q96LT4 415 aa5.19□□□□□ -1.58
PTPRD-202ENST00000356435 TMEM246Q9BRR3 403 aa5.19□□□□□ -1.58
PTPRD-202ENST00000356435 FKRPQ9H9S5 495 aa5.19□□□□□ -1.58
PTPRD-202ENST00000356435 HEBP1Q9NRV9 189 aa5.19□□□□□ -1.58
PTPRD-202ENST00000356435 C14orf119Q9NWQ9 140 aa5.19□□□□□ -1.58
PTPRD-202ENST00000356435 MED16Q9Y2X0 877 aa5.19□□□□□ -1.58
PTPRD-202ENST00000356435 OR5H15A6NDH6 313 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 OR5H14A6NHG9 310 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 OR5H1A6NKK0 313 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 OR52A4PA6NMU1 304 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 H7C1Q1 480 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 GLB1P16278 677 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 SERPINA2P20848 420 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 IL4RP24394 825 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 SNCAP37840 140 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 CSNK1DP48730 415 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 SEC61A1P61619 476 aaKnown RBP5.18□□□□□ -1.58
PTPRD-202ENST00000356435 BLOC1S3Q6QNY0 202 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 FAM57BQ71RH2 274 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 CMIPQ8IY22 773 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 TMEM239Q8WW34 195 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 KCNE4Q8WWG9 221 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 DCUN1D4Q92564 292 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 PHOX2BQ99453 314 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 OCSTAMPQ9BR26 566 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 WDR83Q9BRX9 315 aaKnown RBP5.18□□□□□ -1.58
PTPRD-202ENST00000356435 OR2B2Q9GZK3 357 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 GAREM1Q9H706 876 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 ELOVL3Q9HB03 270 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 WASH6PQ9NQA3 447 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.18□□□□□ -1.58
PTPRD-202ENST00000356435 UGT2A1Q9Y4X1 527 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 MN1Q10571 1320 aaPredicted RBP5.18□□□□□ -1.58
PTPRD-202ENST00000356435 NPIPB15A6NHN6 443 aaPredicted RBP5.18□□□□□ -1.58
PTPRD-202ENST00000356435 ZNF814B7Z6K7 855 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 F5H5P2 479 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 LAMP1P11279 417 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 RPS5P46782 204 aaKnown RBP5.18□□□□□ -1.58
PTPRD-202ENST00000356435 ZP2Q05996 745 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 PPP1R8Q12972 351 aaKnown RBP5.18□□□□□ -1.58
PTPRD-202ENST00000356435 PARS2Q7L3T8 475 aaKnown RBP5.18□□□□□ -1.58
PTPRD-202ENST00000356435 ZNF551Q7Z340 670 aaPredicted RBP5.18□□□□□ -1.58
PTPRD-202ENST00000356435 CNTN4Q8IWV2 1026 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 OR4D6Q8NGJ1 314 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 CORO2AQ92828 525 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 PCYT2Q99447 389 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 ATP13A2Q9NQ11 1180 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 ZNF443Q9Y2A4 671 aaPredicted RBP5.18□□□□□ -1.58
PTPRD-202ENST00000356435 COL2A1P02458 1487 aaPredicted RBP5.18□□□□□ -1.58
PTPRD-202ENST00000356435 TRPM3Q9HCF6 1732 aaPredicted RBP5.18□□□□□ -1.58
PTPRD-202ENST00000356435 SLC35E2BP0CK96 405 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 DEFA4P12838 97 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 BMP1P13497 986 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 OSMP13725 252 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 DNASE1P24855 282 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 PCGF2P35227 344 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 SIRPAP78324 504 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 IKZF1Q13422 519 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 ACSM3Q53FZ2 586 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 C6orf15Q6UXA7 325 aaPredicted RBP5.18□□□□□ -1.58
PTPRD-202ENST00000356435 HTR3DQ70Z44 454 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 SPRED1Q7Z699 444 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 NAA40Q86UY6 237 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 PDZD9Q8IXQ8 264 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 ACBD4Q8NC06 268 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 H1FXQ92522 213 aaKnown RBP5.18□□□□□ -1.58
PTPRD-202ENST00000356435 MUL1Q969V5 352 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 ZNF566Q969W8 418 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 GPR83Q9NYM4 423 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 IER3IP1Q9Y5U9 82 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 UBR2Q8IWV8 1755 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 C4orf47A7E2U8 309 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 SULT1C4O75897 302 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 DCNP07585 359 aaKnown RBP5.18□□□□□ -1.58
PTPRD-202ENST00000356435 FOSL1P15407 271 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 EIF1P41567 113 aaKnown RBP5.18□□□□□ -1.58
PTPRD-202ENST00000356435 RAB13P51153 203 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 CCL11P51671 97 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 NTHL1P78549 312 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 CTBSQ01459 385 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 OR4D1Q15615 310 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 ACTBL2Q562R1 376 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 KRBOX4Q5JUW0 171 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 KIAA1211LQ6NV74 962 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 ZNF529Q6P280 563 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 IL20RBQ6UXL0 311 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 AAED1Q7RTV5 226 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 SLC46A3Q7Z3Q1 461 aa5.18□□□□□ -1.58
PTPRD-202ENST00000356435 ADIPOR2Q86V24 386 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 1067 ms