RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 UBE2J2Q8N2K1 259 aa12.69□□□□□ -0.38
LSS-201ENST00000356396 SNRNP27Q8WVK2 155 aaKnown RBP12.69□□□□□ -0.38
LSS-201ENST00000356396 PTP4A1Q93096 173 aa12.69□□□□□ -0.38
LSS-201ENST00000356396 ABTB1Q969K4 478 aaPredicted RBP12.69□□□□□ -0.38
LSS-201ENST00000356396 QPCTLQ9NXS2 382 aa12.69□□□□□ -0.38
LSS-201ENST00000356396 CALML5Q9NZT1 146 aa12.69□□□□□ -0.38
LSS-201ENST00000356396 EPHA6Q9UF33 1036 aa12.69□□□□□ -0.38
LSS-201ENST00000356396 CLEC4AQ9UMR7 237 aa12.69□□□□□ -0.38
LSS-201ENST00000356396 TVP23AA6NH52 213 aa12.69□□□□□ -0.38
LSS-201ENST00000356396 DCTN6O00399 190 aa12.69□□□□□ -0.38
LSS-201ENST00000356396 HIST1H1CP16403 213 aaKnown RBP12.69□□□□□ -0.38
LSS-201ENST00000356396 CENPAP49450 140 aa12.69□□□□□ -0.38
LSS-201ENST00000356396 ATP12AP54707 1039 aa12.69□□□□□ -0.38
LSS-201ENST00000356396 NUP107P57740 925 aa12.69□□□□□ -0.38
LSS-201ENST00000356396 GPR85P60893 370 aa12.69□□□□□ -0.38
LSS-201ENST00000356396 GPLD1P80108 840 aa12.69□□□□□ -0.38
LSS-201ENST00000356396 LTBQ06643 244 aa12.69□□□□□ -0.38
LSS-201ENST00000356396 TSPAN31Q12999 210 aa12.69□□□□□ -0.38
LSS-201ENST00000356396 B3GNTL1Q67FW5 361 aaPredicted RBP12.69□□□□□ -0.38
LSS-201ENST00000356396 ALDH16A1Q8IZ83 802 aa12.69□□□□□ -0.38
LSS-201ENST00000356396 SAMD14Q8IZD0 417 aaPredicted RBP12.69□□□□□ -0.38
LSS-201ENST00000356396 CYP4Z2PQ8N1L4 340 aa12.69□□□□□ -0.38
LSS-201ENST00000356396 ZNF511Q8NB15 262 aa12.69□□□□□ -0.38
LSS-201ENST00000356396 TBC1D15Q8TC07 691 aa12.69□□□□□ -0.38
LSS-201ENST00000356396 ZNF764Q96H86 408 aaPredicted RBP12.69□□□□□ -0.38
LSS-201ENST00000356396 DHRS1Q96LJ7 313 aa12.69□□□□□ -0.38
LSS-201ENST00000356396 Q96M85 177 aa12.69□□□□□ -0.38
LSS-201ENST00000356396 ZNF285Q96NJ3 590 aa12.69□□□□□ -0.38
LSS-201ENST00000356396 CD180Q99467 661 aa12.69□□□□□ -0.38
LSS-201ENST00000356396 NTMQ9P121 344 aa12.69□□□□□ -0.38
LSS-201ENST00000356396 MED31Q9Y3C7 131 aa12.69□□□□□ -0.38
LSS-201ENST00000356396 PTRH2Q9Y3E5 179 aaKnown RBP12.69□□□□□ -0.38
LSS-201ENST00000356396 ATRXP46100 2492 aa12.69□□□□□ -0.38
LSS-201ENST00000356396 UNC119BA6NIH7 251 aa12.69□□□□□ -0.38
LSS-201ENST00000356396 NDUFB5O43674 189 aa12.69□□□□□ -0.38
LSS-201ENST00000356396 COQ9O75208 318 aa12.69□□□□□ -0.38
LSS-201ENST00000356396 GPX5O75715 221 aa12.69□□□□□ -0.38
LSS-201ENST00000356396 SP9P0CG40 484 aa12.69□□□□□ -0.38
LSS-201ENST00000356396 AZGP1P25311 298 aaKnown RBP12.69□□□□□ -0.38
LSS-201ENST00000356396 IDUAP35475 653 aa12.69□□□□□ -0.38
LSS-201ENST00000356396 ACVR1BP36896 505 aa12.69□□□□□ -0.38
LSS-201ENST00000356396 SERPINB10P48595 397 aa12.69□□□□□ -0.38
LSS-201ENST00000356396 C22orf42Q6IC83 251 aa12.69□□□□□ -0.38
LSS-201ENST00000356396 IL20RBQ6UXL0 311 aa12.69□□□□□ -0.38
LSS-201ENST00000356396 WDFY1Q8IWB7 410 aa12.69□□□□□ -0.38
LSS-201ENST00000356396 FAM98AQ8NCA5 519 aaKnown RBP12.69□□□□□ -0.38
LSS-201ENST00000356396 SMPDL3BQ92485 455 aa12.69□□□□□ -0.38
LSS-201ENST00000356396 ADIPOR1Q96A54 375 aa12.69□□□□□ -0.38
LSS-201ENST00000356396 TBL1XR1Q9BZK7 514 aa12.69□□□□□ -0.38
LSS-201ENST00000356396 WWTR1Q9GZV5 400 aa12.69□□□□□ -0.38
LSS-201ENST00000356396 ZNF768Q9H5H4 540 aaKnown RBP12.69□□□□□ -0.38
LSS-201ENST00000356396 C8orf4Q9NR00 106 aa12.69□□□□□ -0.38
LSS-201ENST00000356396 MALT1Q9UDY8 824 aa12.69□□□□□ -0.38
LSS-201ENST00000356396 TCRBV16S1A1N1A0A5B0 115 aa12.68□□□□□ -0.38
LSS-201ENST00000356396 CD8B2A6NJW9 211 aa12.68□□□□□ -0.38
LSS-201ENST00000356396 SCDO00767 359 aa12.68□□□□□ -0.38
LSS-201ENST00000356396 CD8BP10966 210 aa12.68□□□□□ -0.38
LSS-201ENST00000356396 CELP19835 753 aa12.68□□□□□ -0.38
LSS-201ENST00000356396 NUDT1P36639 197 aa12.68□□□□□ -0.38
LSS-201ENST00000356396 EMP2P54851 167 aa12.68□□□□□ -0.38
LSS-201ENST00000356396 CDK5Q00535 292 aa12.68□□□□□ -0.38
LSS-201ENST00000356396 TMED1Q13445 227 aa12.68□□□□□ -0.38
LSS-201ENST00000356396 MANEAQ5SRI9 462 aa12.68□□□□□ -0.38
LSS-201ENST00000356396 ATP1A1-AS1Q5TC04 95 aa12.68□□□□□ -0.38
LSS-201ENST00000356396 PLAG1Q6DJT9 500 aa12.68□□□□□ -0.38
LSS-201ENST00000356396 KLBQ86Z14 1044 aa12.68□□□□□ -0.38
LSS-201ENST00000356396 APCDD1LQ8NCL9 501 aa12.68□□□□□ -0.38
LSS-201ENST00000356396 OR10G3Q8NGC4 313 aa12.68□□□□□ -0.38
LSS-201ENST00000356396 C3orf49Q96BT1 292 aa12.68□□□□□ -0.38
LSS-201ENST00000356396 ZHX1-C8orf76Q96EF9 292 aa12.68□□□□□ -0.38
LSS-201ENST00000356396 ARL5BQ96KC2 179 aa12.68□□□□□ -0.38
LSS-201ENST00000356396 SNTG1Q9NSN8 517 aa12.68□□□□□ -0.38
LSS-201ENST00000356396 ENPP5Q9UJA9 477 aa12.68□□□□□ -0.38
LSS-201ENST00000356396 SIRT4Q9Y6E7 314 aaPredicted RBP12.68□□□□□ -0.38
LSS-201ENST00000356396 A0A0B4J2E0 115 aa12.68□□□□□ -0.38
LSS-201ENST00000356396 A0A1B0GX12 115 aa12.68□□□□□ -0.38
LSS-201ENST00000356396 H0YC42 278 aa12.68□□□□□ -0.38
LSS-201ENST00000356396 CTDSP2O14595 271 aa12.68□□□□□ -0.38
LSS-201ENST00000356396 DSCR3O14972 297 aa12.68□□□□□ -0.38
LSS-201ENST00000356396 IGKV3-11P04433 115 aa12.68□□□□□ -0.38
LSS-201ENST00000356396 HLA-DOBP13765 273 aa12.68□□□□□ -0.38
LSS-201ENST00000356396 BMP7P18075 431 aa12.68□□□□□ -0.38
LSS-201ENST00000356396 OTX2P32243 289 aa12.68□□□□□ -0.38
LSS-201ENST00000356396 PSMB10P40306 273 aa12.68□□□□□ -0.38
LSS-201ENST00000356396 SMSP52788 366 aa12.68□□□□□ -0.38
LSS-201ENST00000356396 COPZ1P61923 177 aa12.68□□□□□ -0.38
LSS-201ENST00000356396 SRSF6Q13247 344 aaKnown RBP12.68□□□□□ -0.38
LSS-201ENST00000356396 MELKQ14680 651 aa12.68□□□□□ -0.38
LSS-201ENST00000356396 TGIF1Q15583 401 aa12.68□□□□□ -0.38
LSS-201ENST00000356396 RSPO4Q2I0M5 234 aaPredicted RBP12.68□□□□□ -0.38
LSS-201ENST00000356396 GLYR1Q49A26 553 aaPredicted RBP12.68□□□□□ -0.38
LSS-201ENST00000356396 C12orf73Q69YU5 71 aa12.68□□□□□ -0.38
LSS-201ENST00000356396 DHRS4L2Q6PKH6 230 aa12.68□□□□□ -0.38
LSS-201ENST00000356396 BMP8AQ7Z5Y6 402 aa12.68□□□□□ -0.38
LSS-201ENST00000356396 GNPDA2Q8TDQ7 276 aa12.68□□□□□ -0.38
LSS-201ENST00000356396 LCORQ96JN0 433 aaPredicted RBP12.68□□□□□ -0.38
LSS-201ENST00000356396 MN1Q10571 1320 aaPredicted RBP12.67□□□□□ -0.38
LSS-201ENST00000356396 SURF4O15260 269 aa12.67□□□□□ -0.38
LSS-201ENST00000356396 IFNA8P32881 189 aa12.67□□□□□ -0.38
LSS-201ENST00000356396 RORAP35398 523 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms