RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 FESP07332 822 aa14.85□□□□□ -0.03
PDLIM7-201ENST00000355572 NUDT7P0C024 238 aa14.85□□□□□ -0.03
PDLIM7-201ENST00000355572 CD99P14209 185 aa14.85□□□□□ -0.03
PDLIM7-201ENST00000355572 CCNA2P20248 432 aa14.85□□□□□ -0.03
PDLIM7-201ENST00000355572 HOXC12P31275 282 aa14.85□□□□□ -0.03
PDLIM7-201ENST00000355572 DIO1P49895 249 aa14.85□□□□□ -0.03
PDLIM7-201ENST00000355572 RAC3P60763 192 aa14.85□□□□□ -0.03
PDLIM7-201ENST00000355572 ATAD3BQ5T9A4 648 aa14.85□□□□□ -0.03
PDLIM7-201ENST00000355572 C3orf33Q6P1S2 294 aa14.85□□□□□ -0.03
PDLIM7-201ENST00000355572 VRK2Q86Y07 508 aa14.85□□□□□ -0.03
PDLIM7-201ENST00000355572 WFDC8Q8IUA0 241 aa14.85□□□□□ -0.03
PDLIM7-201ENST00000355572 FUNDC1Q8IVP5 155 aa14.85□□□□□ -0.03
PDLIM7-201ENST00000355572 ACTR6Q9GZN1 396 aa14.85□□□□□ -0.03
PDLIM7-201ENST00000355572 UBTD1Q9HAC8 227 aa14.85□□□□□ -0.03
PDLIM7-201ENST00000355572 GLRX2Q9NS18 164 aa14.85□□□□□ -0.03
PDLIM7-201ENST00000355572 RLIMQ9NVW2 624 aa14.85□□□□□ -0.03
PDLIM7-201ENST00000355572 TMEM72A0PK05 275 aa14.84□□□□□ -0.03
PDLIM7-201ENST00000355572 ZC3H12DA2A288 527 aaKnown RBP14.84□□□□□ -0.03
PDLIM7-201ENST00000355572 RFXANKO14593 260 aa14.84□□□□□ -0.03
PDLIM7-201ENST00000355572 CYTIPO60759 359 aa14.84□□□□□ -0.03
PDLIM7-201ENST00000355572 PRKD3O94806 890 aa14.84□□□□□ -0.03
PDLIM7-201ENST00000355572 AGR2O95994 175 aa14.84□□□□□ -0.03
PDLIM7-201ENST00000355572 IDO1P14902 403 aa14.84□□□□□ -0.03
PDLIM7-201ENST00000355572 PGCP20142 388 aa14.84□□□□□ -0.03
PDLIM7-201ENST00000355572 SLC7A1P30825 629 aa14.84□□□□□ -0.03
PDLIM7-201ENST00000355572 SYT14P1Q58G82 188 aa14.84□□□□□ -0.03
PDLIM7-201ENST00000355572 MRPL2Q5T653 305 aaKnown RBP14.84□□□□□ -0.03
PDLIM7-201ENST00000355572 ABLIM2Q6H8Q1 611 aa14.84□□□□□ -0.03
PDLIM7-201ENST00000355572 SLC2A7Q6PXP3 512 aa14.84□□□□□ -0.03
PDLIM7-201ENST00000355572 ZNF836Q6ZNA1 936 aa14.84□□□□□ -0.03
PDLIM7-201ENST00000355572 LRRC74BQ6ZQY2 392 aa14.84□□□□□ -0.03
PDLIM7-201ENST00000355572 TMPPEQ6ZT21 453 aa14.84□□□□□ -0.03
PDLIM7-201ENST00000355572 MSRB3Q8IXL7 192 aa14.84□□□□□ -0.03
PDLIM7-201ENST00000355572 IGFBPL1Q8WX77 278 aa14.84□□□□□ -0.03
PDLIM7-201ENST00000355572 S100PBPQ96BU1 408 aa14.84□□□□□ -0.03
PDLIM7-201ENST00000355572 TRNT1Q96Q11 434 aaKnown RBP14.84□□□□□ -0.03
PDLIM7-201ENST00000355572 SMR3AQ99954 134 aa14.84□□□□□ -0.03
PDLIM7-201ENST00000355572 PAIP1Q9H074 479 aaKnown RBP14.84□□□□□ -0.03
PDLIM7-201ENST00000355572 BCO1Q9HAY6 547 aa14.84□□□□□ -0.03
PDLIM7-201ENST00000355572 SLC52A3Q9NQ40 469 aa14.84□□□□□ -0.03
PDLIM7-201ENST00000355572 ZNF226Q9NYT6 803 aa14.84□□□□□ -0.03
PDLIM7-201ENST00000355572 ZIM2Q9NZV7 527 aa14.84□□□□□ -0.03
PDLIM7-201ENST00000355572 SLAMF8Q9P0V8 285 aa14.84□□□□□ -0.03
PDLIM7-201ENST00000355572 SLC35A3Q9Y2D2 325 aa14.84□□□□□ -0.03
PDLIM7-201ENST00000355572 DSPPQ9NZW4 1301 aa14.84□□□□□ -0.03
PDLIM7-201ENST00000355572 ARID1AO14497 2285 aa14.83□□□□□ -0.03
PDLIM7-201ENST00000355572 CADP27708 2225 aa14.83□□□□□ -0.04
PDLIM7-201ENST00000355572 ZNF716A6NP11 495 aa14.83□□□□□ -0.04
PDLIM7-201ENST00000355572 UBDO15205 165 aa14.83□□□□□ -0.04
PDLIM7-201ENST00000355572 ADAP00813 363 aa14.83□□□□□ -0.04
PDLIM7-201ENST00000355572 YES1P07947 543 aa14.83□□□□□ -0.04
PDLIM7-201ENST00000355572 GKN3PP0CG01 181 aa14.83□□□□□ -0.04
PDLIM7-201ENST00000355572 IMPDH2P12268 514 aa14.83□□□□□ -0.04
PDLIM7-201ENST00000355572 PSMB1P20618 241 aaKnown RBP14.83□□□□□ -0.04
PDLIM7-201ENST00000355572 IDH2P48735 452 aaKnown RBP14.83□□□□□ -0.04
PDLIM7-201ENST00000355572 IDH3AP50213 366 aa14.83□□□□□ -0.04
PDLIM7-201ENST00000355572 POLR2JP52435 117 aaKnown RBP14.83□□□□□ -0.04
PDLIM7-201ENST00000355572 FOXG1P55316 489 aaPredicted RBP14.83□□□□□ -0.04
PDLIM7-201ENST00000355572 RNPS1Q15287 305 aaKnown RBP14.83□□□□□ -0.04
PDLIM7-201ENST00000355572 TMEM201Q5SNT2 666 aa14.83□□□□□ -0.04
PDLIM7-201ENST00000355572 BEND4Q6ZU67 534 aa14.83□□□□□ -0.04
PDLIM7-201ENST00000355572 GLB1L3Q8NCI6 653 aaPredicted RBP14.83□□□□□ -0.04
PDLIM7-201ENST00000355572 LILRB1Q8NHL6 650 aaPredicted RBP14.83□□□□□ -0.04
PDLIM7-201ENST00000355572 ZNF563Q8TA94 476 aa14.83□□□□□ -0.04
PDLIM7-201ENST00000355572 WDR60Q8WVS4 1066 aa14.83□□□□□ -0.04
PDLIM7-201ENST00000355572 GTF2H4Q92759 462 aa14.83□□□□□ -0.04
PDLIM7-201ENST00000355572 ATP6V1G3Q96LB4 118 aa14.83□□□□□ -0.04
PDLIM7-201ENST00000355572 EXOSC3Q9NQT5 275 aaKnown RBP14.83□□□□□ -0.04
PDLIM7-201ENST00000355572 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.83□□□□□ -0.04
PDLIM7-201ENST00000355572 SLC25A37Q9NYZ2 338 aa14.83□□□□□ -0.04
PDLIM7-201ENST00000355572 CHRNA9Q9UGM1 479 aa14.83□□□□□ -0.04
PDLIM7-201ENST00000355572 OSGIN1Q9UJX0 560 aa14.83□□□□□ -0.04
PDLIM7-201ENST00000355572 GJE1A6NN92 205 aa14.82□□□□□ -0.04
PDLIM7-201ENST00000355572 SLCO1B7G3V0H7 640 aa14.82□□□□□ -0.04
PDLIM7-201ENST00000355572 BCHEP06276 602 aa14.82□□□□□ -0.04
PDLIM7-201ENST00000355572 TFPTP0C1Z6 253 aa14.82□□□□□ -0.04
PDLIM7-201ENST00000355572 ZCCHC18P0CG32 403 aa14.82□□□□□ -0.04
PDLIM7-201ENST00000355572 PRG2P13727 222 aa14.82□□□□□ -0.04
PDLIM7-201ENST00000355572 ACAA2P42765 397 aaKnown RBP14.82□□□□□ -0.04
PDLIM7-201ENST00000355572 OR3A2P47893 321 aa14.82□□□□□ -0.04
PDLIM7-201ENST00000355572 RASGEF1BQ0VAM2 473 aa14.82□□□□□ -0.04
PDLIM7-201ENST00000355572 EPS8Q12929 822 aa14.82□□□□□ -0.04
PDLIM7-201ENST00000355572 TAB1Q15750 504 aa14.82□□□□□ -0.04
PDLIM7-201ENST00000355572 ACKR1Q16570 336 aa14.82□□□□□ -0.04
PDLIM7-201ENST00000355572 GSTA3Q16772 222 aa14.82□□□□□ -0.04
PDLIM7-201ENST00000355572 ALKBH2Q6NS38 261 aa14.82□□□□□ -0.04
PDLIM7-201ENST00000355572 COMTD1Q86VU5 262 aa14.82□□□□□ -0.04
PDLIM7-201ENST00000355572 CCDC103Q8IW40 242 aa14.82□□□□□ -0.04
PDLIM7-201ENST00000355572 CLIP4Q8N3C7 705 aa14.82□□□□□ -0.04
PDLIM7-201ENST00000355572 ARFGAP2Q8N6H7 521 aa14.82□□□□□ -0.04
PDLIM7-201ENST00000355572 SLC38A5Q8WUX1 472 aa14.82□□□□□ -0.04
PDLIM7-201ENST00000355572 NEUROG1Q92886 237 aa14.82□□□□□ -0.04
PDLIM7-201ENST00000355572 PLPPR2Q96GM1 343 aa14.82□□□□□ -0.04
PDLIM7-201ENST00000355572 C7orf26Q96N11 449 aa14.82□□□□□ -0.04
PDLIM7-201ENST00000355572 ZBTB18Q99592 522 aa14.82□□□□□ -0.04
PDLIM7-201ENST00000355572 TPT1P8Q9HAU6 139 aa14.82□□□□□ -0.04
PDLIM7-201ENST00000355572 TIGARQ9NQ88 270 aa14.82□□□□□ -0.04
PDLIM7-201ENST00000355572 GPR52Q9Y2T5 361 aa14.82□□□□□ -0.04
PDLIM7-201ENST00000355572 PCDHB14Q9Y5E9 798 aa14.82□□□□□ -0.04
PDLIM7-201ENST00000355572 FLNAP21333 2647 aaKnown RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms