RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 PRODH2Q9UF12 536 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 SLC9A8Q9Y2E8 581 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 MRPS28Q9Y2Q9 187 aaKnown RBP1.36□□□□□ -2.19
BRCA1-202ENST00000354071 SELENOKQ9Y6D0 94 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 RNF123Q5XPI4 1314 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 USP9XQ93008 2570 aaPredicted RBP1.35□□□□□ -2.19
BRCA1-202ENST00000354071 C5orf42Q9H799 3197 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 A0A1W2PS18 150 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 SMCO2A6NFE2 343 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 SAGE2PA6NJ88 616 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 LMX1BO60663 402 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 ATP5LO75964 103 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 UMPSP11172 480 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 ACADSP16219 412 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 CHMLP26374 656 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 MAGEA1P43355 309 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 CDKN1BP46527 198 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 STK19P49842 368 aaPredicted RBP1.35□□□□□ -2.19
BRCA1-202ENST00000354071 ATP4BP51164 291 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 CRYBB1P53674 252 aaPredicted RBP1.35□□□□□ -2.19
BRCA1-202ENST00000354071 RPS15P62841 145 aaKnown RBP1.35□□□□□ -2.19
BRCA1-202ENST00000354071 CHRNA6Q15825 494 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 FAM199XQ6PEV8 388 aaPredicted RBP1.35□□□□□ -2.19
BRCA1-202ENST00000354071 DOK6Q6PKX4 331 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 C1QL2Q7Z5L3 287 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 ARL14Q8N4G2 192 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 IQCF1Q8N6M8 205 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 GVQW1Q8N7I0 195 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 ZNF519Q8TB69 540 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 U2AF1L4Q8WU68 220 aaKnown RBP1.35□□□□□ -2.19
BRCA1-202ENST00000354071 CACNG8Q8WXS5 425 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 FAF2Q96CS3 445 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 IFT74Q96LB3 600 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 CCT8L2Q96SF2 557 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 COMMD4Q9H0A8 199 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 EXO5Q9H790 373 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 NEK6Q9HC98 313 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 KLRF1Q9NZS2 232 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 PITPNC1Q9UKF7 332 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 ANGPTL2Q9UKU9 493 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 ALPK3Q96L96 1907 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 SCN5AQ14524 2016 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 POLA1P09884 1462 aaPredicted RBP1.35□□□□□ -2.19
BRCA1-202ENST00000354071 DYNC2H1Q8NCM8 4307 aaKnown RBP1.35□□□□□ -2.19
BRCA1-202ENST00000354071 RPL37AP8A6NKH3 93 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 SMAD6O43541 496 aaKnown RBP1.35□□□□□ -2.19
BRCA1-202ENST00000354071 VENTXO95231 258 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 LRATO95237 230 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 SEMA4FO95754 770 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 IGFBP1P08833 259 aaPredicted RBP1.35□□□□□ -2.19
BRCA1-202ENST00000354071 HOXD4P09016 255 aaPredicted RBP1.35□□□□□ -2.19
BRCA1-202ENST00000354071 ZSCAN5DPP0CG00 497 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 PRKAR1AP10644 381 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 DAOP14920 347 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 PGCP20142 388 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 ATP5A1P25705 553 aaKnown RBP1.35□□□□□ -2.19
BRCA1-202ENST00000354071 CD1CP29017 333 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 NDUFV3P56181 108 aaKnown RBP1.35□□□□□ -2.19
BRCA1-202ENST00000354071 CLDN8P56748 225 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 DNAJC3Q13217 504 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 FHL1Q13642 323 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 ITIH4Q14624 930 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 DPYSL2Q16555 572 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 C6orf226Q5I0X4 101 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 GPRC6AQ5T6X5 926 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 PIP5KL1Q5T9C9 394 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 CARD17Q5XLA6 110 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 NADSYN1Q6IA69 706 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 RHBDD2Q6NTF9 364 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 ZNF790Q6PG37 636 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 C19orf48Q6RUI8 117 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 NUFIP2Q7Z417 695 aaKnown RBP1.35□□□□□ -2.19
BRCA1-202ENST00000354071 RAB42Q8N4Z0 105 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 ZNF781Q8N8C0 355 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 SYT14Q8NB59 555 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 DNAJA4Q8WW22 397 aaPredicted RBP1.35□□□□□ -2.19
BRCA1-202ENST00000354071 LMLNQ96KR4 655 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 SORCS2Q96PQ0 1159 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 MBOAT4Q96T53 435 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 MRIQ9BWK5 157 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 AGPAT3Q9NRZ7 376 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 NRBP2Q9NSY0 501 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 PLCXD1Q9NUJ7 323 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 MRPL39Q9NYK5 338 aaKnown RBP1.35□□□□□ -2.19
BRCA1-202ENST00000354071 FRMPD4Q14CM0 1322 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 NPHP4O75161 1426 aaPredicted RBP1.35□□□□□ -2.19
BRCA1-202ENST00000354071 MYO5CQ9NQX4 1742 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 TCP11X1B4DZS4 312 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 GOLGA8TH3BQL2 631 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 TM9SF1O15321 606 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 TNFSF12O43508 249 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 EDN1P05305 212 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 DCKP27707 260 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 RGRP47804 291 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 HADHBP55084 474 aaKnown RBP1.35□□□□□ -2.19
BRCA1-202ENST00000354071 BIDP55957 195 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 UBE2MP61081 183 aaKnown RBP1.35□□□□□ -2.19
BRCA1-202ENST00000354071 NTHL1P78549 312 aa1.35□□□□□ -2.19
BRCA1-202ENST00000354071 OTUD4Q01804 1114 aaKnown RBP1.35□□□□□ -2.19
BRCA1-202ENST00000354071 EIF2B1Q14232 305 aaKnown RBP1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms