RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 RSBN1Q5VWQ0 802 aaPredicted RBP14.2□□□□□ -0.14
UPF3B-202ENST00000345865 ZNF544Q6NX49 715 aa14.2□□□□□ -0.14
UPF3B-202ENST00000345865 RTL4Q6ZR62 310 aa14.2□□□□□ -0.14
UPF3B-202ENST00000345865 Q8N402 240 aa14.2□□□□□ -0.14
UPF3B-202ENST00000345865 OR5M3Q8NGP4 307 aa14.2□□□□□ -0.14
UPF3B-202ENST00000345865 C16orf52Q8NHV5 167 aa14.2□□□□□ -0.14
UPF3B-202ENST00000345865 SMPDL3BQ92485 455 aa14.2□□□□□ -0.14
UPF3B-202ENST00000345865 C4orf36Q96KX1 117 aa14.2□□□□□ -0.14
UPF3B-202ENST00000345865 LMF1Q96S06 567 aa14.2□□□□□ -0.14
UPF3B-202ENST00000345865 TTTY10Q9BZA0 68 aa14.2□□□□□ -0.14
UPF3B-202ENST00000345865 TPSD1Q9BZJ3 242 aa14.2□□□□□ -0.14
UPF3B-202ENST00000345865 TRIM2Q9C040 744 aa14.2□□□□□ -0.14
UPF3B-202ENST00000345865 ERVMER34-1Q9H9K5 563 aa14.2□□□□□ -0.14
UPF3B-202ENST00000345865 ERVK-19Q9WJR5 959 aa14.2□□□□□ -0.14
UPF3B-202ENST00000345865 MPDZO75970 2070 aa14.2□□□□□ -0.14
UPF3B-202ENST00000345865 A8MV72 311 aaPredicted RBP14.2□□□□□ -0.14
UPF3B-202ENST00000345865 B4DXG7 233 aa14.2□□□□□ -0.14
UPF3B-202ENST00000345865 MAGEB4O15481 346 aaPredicted RBP14.2□□□□□ -0.14
UPF3B-202ENST00000345865 HK1P19367 917 aa14.2□□□□□ -0.14
UPF3B-202ENST00000345865 PGDP52209 483 aa14.2□□□□□ -0.14
UPF3B-202ENST00000345865 ATAD3CQ5T2N8 411 aa14.2□□□□□ -0.14
UPF3B-202ENST00000345865 FAAH2Q6GMR7 532 aa14.2□□□□□ -0.14
UPF3B-202ENST00000345865 GLCCI1Q86VQ1 547 aa14.2□□□□□ -0.14
UPF3B-202ENST00000345865 RDH10Q8IZV5 341 aa14.2□□□□□ -0.14
UPF3B-202ENST00000345865 GDF15Q99988 308 aa14.2□□□□□ -0.14
UPF3B-202ENST00000345865 TRIM36Q9NQ86 728 aa14.2□□□□□ -0.14
UPF3B-202ENST00000345865 PRTFDC1Q9NRG1 225 aa14.2□□□□□ -0.14
UPF3B-202ENST00000345865 CHRNA9Q9UGM1 479 aa14.2□□□□□ -0.14
UPF3B-202ENST00000345865 CLCA3PQ9Y6N3 262 aa14.2□□□□□ -0.14
UPF3B-202ENST00000345865 CACNA1IQ9P0X4 2223 aa14.19□□□□□ -0.14
UPF3B-202ENST00000345865 J3QLW9 94 aa14.19□□□□□ -0.14
UPF3B-202ENST00000345865 IMPA2O14732 288 aa14.19□□□□□ -0.14
UPF3B-202ENST00000345865 PLPP2O43688 288 aa14.19□□□□□ -0.14
UPF3B-202ENST00000345865 SRPX2O60687 465 aaPredicted RBP14.19□□□□□ -0.14
UPF3B-202ENST00000345865 MT-ND5P03915 603 aa14.19□□□□□ -0.14
UPF3B-202ENST00000345865 GUSBP08236 651 aa14.19□□□□□ -0.14
UPF3B-202ENST00000345865 SLC2A2P11168 524 aaPredicted RBP14.19□□□□□ -0.14
UPF3B-202ENST00000345865 HIST1H1CP16403 213 aaKnown RBP14.19□□□□□ -0.14
UPF3B-202ENST00000345865 ZNF19P17023 458 aa14.19□□□□□ -0.14
UPF3B-202ENST00000345865 ZNF3P17036 446 aa14.19□□□□□ -0.14
UPF3B-202ENST00000345865 RBM34P42696 430 aaKnown RBP14.19□□□□□ -0.14
UPF3B-202ENST00000345865 GABRA4P48169 554 aa14.19□□□□□ -0.14
UPF3B-202ENST00000345865 IFITM2Q01629 132 aa14.19□□□□□ -0.14
UPF3B-202ENST00000345865 SLC3A1Q07837 685 aa14.19□□□□□ -0.14
UPF3B-202ENST00000345865 ZSCAN1Q8NBB4 408 aa14.19□□□□□ -0.14
UPF3B-202ENST00000345865 SDR9C7Q8NEX9 313 aa14.19□□□□□ -0.14
UPF3B-202ENST00000345865 OR52E2Q8NGJ4 325 aa14.19□□□□□ -0.14
UPF3B-202ENST00000345865 OR51L1Q8NGJ5 315 aa14.19□□□□□ -0.14
UPF3B-202ENST00000345865 OR5J2Q8NH18 312 aa14.19□□□□□ -0.14
UPF3B-202ENST00000345865 OR4K13Q8NH42 304 aa14.19□□□□□ -0.14
UPF3B-202ENST00000345865 ZNRF4Q8WWF5 429 aa14.19□□□□□ -0.14
UPF3B-202ENST00000345865 EFHD2Q96C19 240 aaPredicted RBP14.19□□□□□ -0.14
UPF3B-202ENST00000345865 ST6GAL2Q96JF0 529 aa14.19□□□□□ -0.14
UPF3B-202ENST00000345865 PGLYRP3Q96LB9 341 aa14.19□□□□□ -0.14
UPF3B-202ENST00000345865 ERMAPQ96PL5 475 aaPredicted RBP14.19□□□□□ -0.14
UPF3B-202ENST00000345865 CTRCQ99895 268 aa14.19□□□□□ -0.14
UPF3B-202ENST00000345865 NDC1Q9BTX1 674 aa14.19□□□□□ -0.14
UPF3B-202ENST00000345865 CCDC86Q9H6F5 360 aaKnown RBP14.19□□□□□ -0.14
UPF3B-202ENST00000345865 NEK6Q9HC98 313 aa14.19□□□□□ -0.14
UPF3B-202ENST00000345865 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.19□□□□□ -0.14
UPF3B-202ENST00000345865 MCIDASD6RGH6 385 aa14.19□□□□□ -0.14
UPF3B-202ENST00000345865 HLA-DQB1P01920 261 aa14.19□□□□□ -0.14
UPF3B-202ENST00000345865 TFP02787 698 aa14.19□□□□□ -0.14
UPF3B-202ENST00000345865 CLPSP04118 112 aa14.19□□□□□ -0.14
UPF3B-202ENST00000345865 ELK1P19419 428 aa14.19□□□□□ -0.14
UPF3B-202ENST00000345865 ACVR1BP36896 505 aa14.19□□□□□ -0.14
UPF3B-202ENST00000345865 MTNR1BP49286 362 aa14.19□□□□□ -0.14
UPF3B-202ENST00000345865 BLKP51451 505 aa14.19□□□□□ -0.14
UPF3B-202ENST00000345865 ATP12AP54707 1039 aa14.19□□□□□ -0.14
UPF3B-202ENST00000345865 OR10A3P58181 314 aa14.19□□□□□ -0.14
UPF3B-202ENST00000345865 IL18Q14116 193 aa14.19□□□□□ -0.14
UPF3B-202ENST00000345865 GAS6Q14393 721 aa14.19□□□□□ -0.14
UPF3B-202ENST00000345865 GXYLT1Q4G148 440 aa14.19□□□□□ -0.14
UPF3B-202ENST00000345865 IDNKQ5T6J7 187 aa14.19□□□□□ -0.14
UPF3B-202ENST00000345865 ULK3Q6PHR2 472 aa14.19□□□□□ -0.14
UPF3B-202ENST00000345865 IL20RBQ6UXL0 311 aa14.19□□□□□ -0.14
UPF3B-202ENST00000345865 VASH1Q7L8A9 365 aaPredicted RBP14.19□□□□□ -0.14
UPF3B-202ENST00000345865 ZNF595Q8IYB9 648 aa14.19□□□□□ -0.14
UPF3B-202ENST00000345865 BCORP1Q8N888 145 aa14.19□□□□□ -0.14
UPF3B-202ENST00000345865 DGAT2Q96PD7 388 aa14.19□□□□□ -0.14
UPF3B-202ENST00000345865 DEPDC7Q96QD5 511 aa14.19□□□□□ -0.14
UPF3B-202ENST00000345865 OR10A5Q9H207 317 aa14.19□□□□□ -0.14
UPF3B-202ENST00000345865 INPP5EQ9NRR6 644 aa14.19□□□□□ -0.14
UPF3B-202ENST00000345865 HAO2Q9NYQ3 351 aa14.19□□□□□ -0.14
UPF3B-202ENST00000345865 SERTAD3Q9UJW9 196 aa14.19□□□□□ -0.14
UPF3B-202ENST00000345865 ADAM18Q9Y3Q7 739 aa14.19□□□□□ -0.14
UPF3B-202ENST00000345865 N6AMT1Q9Y5N5 214 aa14.19□□□□□ -0.14
UPF3B-202ENST00000345865 EML5Q05BV3 1969 aa14.19□□□□□ -0.14
UPF3B-202ENST00000345865 HTR3EA5X5Y0 456 aa14.18□□□□□ -0.14
UPF3B-202ENST00000345865 NSA2O95478 260 aaKnown RBP14.18□□□□□ -0.14
UPF3B-202ENST00000345865 SLC6A6P31641 620 aa14.18□□□□□ -0.14
UPF3B-202ENST00000345865 THBS2P35442 1172 aa14.18□□□□□ -0.14
UPF3B-202ENST00000345865 CAPZBP47756 277 aa14.18□□□□□ -0.14
UPF3B-202ENST00000345865 GFERP55789 205 aa14.18□□□□□ -0.14
UPF3B-202ENST00000345865 FUT7Q11130 342 aa14.18□□□□□ -0.14
UPF3B-202ENST00000345865 SF3B4Q15427 424 aaKnown RBP eCLIP14.18□□□□□ -0.14
UPF3B-202ENST00000345865 ZNF615Q8N8J6 731 aa14.18□□□□□ -0.14
UPF3B-202ENST00000345865 OR13C5Q8NGS8 318 aa14.18□□□□□ -0.14
UPF3B-202ENST00000345865 ZMYND19Q96E35 227 aaPredicted RBP14.18□□□□□ -0.14
UPF3B-202ENST00000345865 MMABQ96EY8 250 aaPredicted RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms