RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 LY6DQ14210 128 aa16.19■□□□□ 0.18
SDCBP2-201ENST00000339987 SLC10A1Q14973 349 aa16.19■□□□□ 0.18
SDCBP2-201ENST00000339987 YRDCQ86U90 279 aaKnown RBP16.19■□□□□ 0.18
SDCBP2-201ENST00000339987 MPP4Q96JB8 637 aa16.19■□□□□ 0.18
SDCBP2-201ENST00000339987 UBL7Q96S82 380 aaPredicted RBP16.19■□□□□ 0.18
SDCBP2-201ENST00000339987 NPAS1Q99742 590 aa16.19■□□□□ 0.18
SDCBP2-201ENST00000339987 PIGQQ9BRB3 760 aa16.19■□□□□ 0.18
SDCBP2-201ENST00000339987 NMNAT1Q9HAN9 279 aaPredicted RBP16.19■□□□□ 0.18
SDCBP2-201ENST00000339987 MAN2C1Q9NTJ4 1040 aa16.19■□□□□ 0.18
SDCBP2-201ENST00000339987 LUZP4Q9P127 313 aa16.19■□□□□ 0.18
SDCBP2-201ENST00000339987 DNAJB9Q9UBS3 223 aa16.19■□□□□ 0.18
SDCBP2-201ENST00000339987 OSGIN1Q9UJX0 560 aa16.19■□□□□ 0.18
SDCBP2-201ENST00000339987 SLC7A7Q9UM01 511 aa16.19■□□□□ 0.18
SDCBP2-201ENST00000339987 DSPP15924 2871 aaKnown RBP16.18■□□□□ 0.18
SDCBP2-201ENST00000339987 A0A1W2PRQ8 180 aa16.18■□□□□ 0.18
SDCBP2-201ENST00000339987 LINC01387J3KSC0 135 aa16.18■□□□□ 0.18
SDCBP2-201ENST00000339987 CELA3AP09093 270 aa16.18■□□□□ 0.18
SDCBP2-201ENST00000339987 FASP25445 335 aa16.18■□□□□ 0.18
SDCBP2-201ENST00000339987 ELK4P28324 431 aa16.18■□□□□ 0.18
SDCBP2-201ENST00000339987 RRM2P31350 389 aa16.18■□□□□ 0.18
SDCBP2-201ENST00000339987 MAP2K6P52564 334 aa16.18■□□□□ 0.18
SDCBP2-201ENST00000339987 SPIBQ01892 262 aa16.18■□□□□ 0.18
SDCBP2-201ENST00000339987 DGCR6Q14129 220 aa16.18■□□□□ 0.18
SDCBP2-201ENST00000339987 GK3PQ14409 553 aa16.18■□□□□ 0.18
SDCBP2-201ENST00000339987 TRAM2Q15035 370 aa16.18■□□□□ 0.18
SDCBP2-201ENST00000339987 ATP6AP1Q15904 470 aa16.18■□□□□ 0.18
SDCBP2-201ENST00000339987 COLEC12Q5KU26 742 aa16.18■□□□□ 0.18
SDCBP2-201ENST00000339987 WIPI1Q5MNZ9 446 aaPredicted RBP16.18■□□□□ 0.18
SDCBP2-201ENST00000339987 RAET1LQ5VY80 246 aa16.18■□□□□ 0.18
SDCBP2-201ENST00000339987 LINC00114Q6XXX2 140 aa16.18■□□□□ 0.18
SDCBP2-201ENST00000339987 SIAH3Q8IW03 269 aa16.18■□□□□ 0.18
SDCBP2-201ENST00000339987 PRSS27Q9BQR3 290 aa16.18■□□□□ 0.18
SDCBP2-201ENST00000339987 AGPAT4Q9NRZ5 378 aa16.18■□□□□ 0.18
SDCBP2-201ENST00000339987 RHCGQ9UBD6 479 aa16.18■□□□□ 0.18
SDCBP2-201ENST00000339987 RPH3AQ9Y2J0 694 aaPredicted RBP16.18■□□□□ 0.18
SDCBP2-201ENST00000339987 TESMINQ9Y4I5 508 aa16.18■□□□□ 0.18
SDCBP2-201ENST00000339987 A0A087WUJ7 227 aa16.17■□□□□ 0.18
SDCBP2-201ENST00000339987 TMED7-TICAM2A0A0A6YYA0 188 aa16.17■□□□□ 0.18
SDCBP2-201ENST00000339987 OR2M5A3KFT3 312 aa16.17■□□□□ 0.18
SDCBP2-201ENST00000339987 ELOA3DA6NLF2 546 aaPredicted RBP16.17■□□□□ 0.18
SDCBP2-201ENST00000339987 SHISA8B8ZZ34 492 aa16.17■□□□□ 0.18
SDCBP2-201ENST00000339987 CLOCKO15516 846 aa16.17■□□□□ 0.18
SDCBP2-201ENST00000339987 GADD45GO95257 159 aa16.17■□□□□ 0.18
SDCBP2-201ENST00000339987 WISP1O95388 367 aa16.17■□□□□ 0.18
SDCBP2-201ENST00000339987 LDLRP01130 860 aa16.17■□□□□ 0.18
SDCBP2-201ENST00000339987 IGHG3P01860 377 aa16.17■□□□□ 0.18
SDCBP2-201ENST00000339987 CHMP24386 653 aa16.17■□□□□ 0.18
SDCBP2-201ENST00000339987 HMGA2P52926 109 aa16.17■□□□□ 0.18
SDCBP2-201ENST00000339987 FOXK1P85037 733 aa16.17■□□□□ 0.18
SDCBP2-201ENST00000339987 ELOA3BQ3SY89 546 aa16.17■□□□□ 0.18
SDCBP2-201ENST00000339987 CMPK2Q5EBM0 449 aa16.17■□□□□ 0.18
SDCBP2-201ENST00000339987 FAM180AQ6UWF9 173 aa16.17■□□□□ 0.18
SDCBP2-201ENST00000339987 ADGRG3Q86Y34 549 aa16.17■□□□□ 0.18
SDCBP2-201ENST00000339987 LSM14AQ8ND56 463 aaKnown RBP16.17■□□□□ 0.18
SDCBP2-201ENST00000339987 ELOA3Q8NG57 546 aa16.17■□□□□ 0.18
SDCBP2-201ENST00000339987 SFXN2Q96NB2 322 aa16.17■□□□□ 0.18
SDCBP2-201ENST00000339987 ZNF426Q9BUY5 554 aa16.17■□□□□ 0.18
SDCBP2-201ENST00000339987 REEP1Q9H902 201 aa16.17■□□□□ 0.18
SDCBP2-201ENST00000339987 SERINC1Q9NRX5 453 aa16.17■□□□□ 0.18
SDCBP2-201ENST00000339987 TMED7Q9Y3B3 224 aa16.17■□□□□ 0.18
SDCBP2-201ENST00000339987 LYVE1Q9Y5Y7 322 aa16.17■□□□□ 0.18
SDCBP2-201ENST00000339987 ATXN7O15265 892 aaPredicted RBP16.16■□□□□ 0.18
SDCBP2-201ENST00000339987 HCN1O60741 890 aa16.16■□□□□ 0.18
SDCBP2-201ENST00000339987 TCEA1P23193 301 aaKnown RBP16.16■□□□□ 0.18
SDCBP2-201ENST00000339987 CXCR1P25024 350 aa16.16■□□□□ 0.18
SDCBP2-201ENST00000339987 FKBP2P26885 142 aaKnown RBP16.16■□□□□ 0.18
SDCBP2-201ENST00000339987 RBM34P42696 430 aaKnown RBP16.16■□□□□ 0.18
SDCBP2-201ENST00000339987 GFRA1P56159 465 aa16.16■□□□□ 0.18
SDCBP2-201ENST00000339987 SELENBP1Q13228 472 aa16.16■□□□□ 0.18
SDCBP2-201ENST00000339987 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.16■□□□□ 0.18
SDCBP2-201ENST00000339987 ZNF324BQ6AW86 544 aaPredicted RBP16.16■□□□□ 0.18
SDCBP2-201ENST00000339987 WDR88Q6ZMY6 472 aa16.16■□□□□ 0.18
SDCBP2-201ENST00000339987 OR5M1Q8NGP8 315 aa16.16■□□□□ 0.18
SDCBP2-201ENST00000339987 LRTOMTQ8WZ04 291 aa16.16■□□□□ 0.18
SDCBP2-201ENST00000339987 HS6ST2Q96MM7 605 aa16.16■□□□□ 0.18
SDCBP2-201ENST00000339987 EPYCQ99645 322 aa16.16■□□□□ 0.18
SDCBP2-201ENST00000339987 FUZQ9BT04 418 aa16.16■□□□□ 0.18
SDCBP2-201ENST00000339987 DEFB127Q9H1M4 99 aa16.16■□□□□ 0.18
SDCBP2-201ENST00000339987 SLC6A15Q9H2J7 730 aa16.16■□□□□ 0.18
SDCBP2-201ENST00000339987 PLSCR2Q9NRY7 297 aa16.16■□□□□ 0.18
SDCBP2-201ENST00000339987 CHRNA9Q9UGM1 479 aa16.16■□□□□ 0.18
SDCBP2-201ENST00000339987 SPIN1Q9Y657 262 aaPredicted RBP16.16■□□□□ 0.18
SDCBP2-201ENST00000339987 BAHCC1Q9P281 2608 aa16.16■□□□□ 0.18
SDCBP2-201ENST00000339987 TRGV5A0A0B4J1U4 118 aa16.15■□□□□ 0.18
SDCBP2-201ENST00000339987 GNGT2O14610 69 aa16.15■□□□□ 0.18
SDCBP2-201ENST00000339987 ZNF208O43345 1280 aa16.15■□□□□ 0.18
SDCBP2-201ENST00000339987 EFNA2O43921 213 aa16.15■□□□□ 0.18
SDCBP2-201ENST00000339987 SUSD5O60279 629 aa16.15■□□□□ 0.18
SDCBP2-201ENST00000339987 FUT4P22083 530 aa16.15■□□□□ 0.18
SDCBP2-201ENST00000339987 GCKP35557 465 aa16.15■□□□□ 0.18
SDCBP2-201ENST00000339987 LIMS1P48059 325 aa16.15■□□□□ 0.18
SDCBP2-201ENST00000339987 RCN1Q15293 331 aa16.15■□□□□ 0.18
SDCBP2-201ENST00000339987 C3orf33Q6P1S2 294 aa16.15■□□□□ 0.18
SDCBP2-201ENST00000339987 TRILQ7L0X0 811 aa16.15■□□□□ 0.18
SDCBP2-201ENST00000339987 NKAIN4Q8IVV8 208 aa16.15■□□□□ 0.18
SDCBP2-201ENST00000339987 LILRA2Q8N149 483 aa16.15■□□□□ 0.18
SDCBP2-201ENST00000339987 PQLC1Q8N2U9 271 aa16.15■□□□□ 0.18
SDCBP2-201ENST00000339987 OR4C15Q8NGM1 316 aa16.15■□□□□ 0.18
SDCBP2-201ENST00000339987 NEIL3Q8TAT5 605 aa16.15■□□□□ 0.18
SDCBP2-201ENST00000339987 RNF217Q8TC41 542 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms