RNA–Protein interactions for RNA: ENST00000338758.11

PARVB-201, Transcript of parvin beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PARVB, Length 5,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-201ENST00000338758 CAMK2AQ9UQM7 478 aa13.19□□□□□ -0.3
PARVB-201ENST00000338758 ECH1Q13011 328 aa13.19□□□□□ -0.3
PARVB-201ENST00000338758 SF3B4Q15427 424 aaKnown RBP eCLIP13.19□□□□□ -0.3
PARVB-201ENST00000338758 KIAA0907Q7Z7F0 614 aaPredicted RBP13.19□□□□□ -0.3
PARVB-201ENST00000338758 NPRL2Q8WTW4 380 aa13.19□□□□□ -0.3
PARVB-201ENST00000338758 CNOT9Q92600 299 aaKnown RBP13.19□□□□□ -0.3
PARVB-201ENST00000338758 SPNS1Q9H2V7 528 aa13.19□□□□□ -0.3
PARVB-201ENST00000338758 SYT5O00445 386 aa13.18□□□□□ -0.3
PARVB-201ENST00000338758 RBBP9O75884 186 aa13.18□□□□□ -0.3
PARVB-201ENST00000338758 PIAS2O75928 621 aa13.18□□□□□ -0.3
PARVB-201ENST00000338758 SCN4AP35499 1836 aa13.18□□□□□ -0.3
PARVB-201ENST00000338758 AQP2P41181 271 aa13.18□□□□□ -0.3
PARVB-201ENST00000338758 GPNMBQ14956 572 aa13.18□□□□□ -0.3
PARVB-201ENST00000338758 DUSP7Q16829 419 aa13.18□□□□□ -0.3
PARVB-201ENST00000338758 ZNF385BQ569K4 471 aa13.18□□□□□ -0.3
PARVB-201ENST00000338758 ATAD3CQ5T2N8 411 aa13.18□□□□□ -0.3
PARVB-201ENST00000338758 LRRN1Q6UXK5 716 aa13.18□□□□□ -0.3
PARVB-201ENST00000338758 SPTSSAQ969W0 71 aa13.18□□□□□ -0.3
PARVB-201ENST00000338758 SCGB3A2Q96PL1 93 aa13.18□□□□□ -0.3
PARVB-201ENST00000338758 DOCK5Q9H7D0 1870 aa13.18□□□□□ -0.3
PARVB-201ENST00000338758 TRPV4Q9HBA0 871 aa13.18□□□□□ -0.3
PARVB-201ENST00000338758 A4GALTQ9NPC4 353 aa13.18□□□□□ -0.3
PARVB-201ENST00000338758 SATB2Q9UPW6 733 aa13.18□□□□□ -0.3
PARVB-201ENST00000338758 COLQQ9Y215 455 aaPredicted RBP13.18□□□□□ -0.3
PARVB-201ENST00000338758 ACOT8O14734 319 aa13.18□□□□□ -0.3
PARVB-201ENST00000338758 WDPCPO95876 746 aa13.18□□□□□ -0.3
PARVB-201ENST00000338758 RLN2P04090 185 aa13.18□□□□□ -0.3
PARVB-201ENST00000338758 ALPLP05186 524 aa13.18□□□□□ -0.3
PARVB-201ENST00000338758 TMEM225BP0DP42 221 aa13.18□□□□□ -0.3
PARVB-201ENST00000338758 RAB3BP20337 219 aa13.18□□□□□ -0.3
PARVB-201ENST00000338758 GRK5P34947 590 aa13.18□□□□□ -0.3
PARVB-201ENST00000338758 FXYD6P3P58550 94 aa13.18□□□□□ -0.3
PARVB-201ENST00000338758 HERV-K104P61576 105 aa13.18□□□□□ -0.3
PARVB-201ENST00000338758 DGLUCYQ7Z3D6 616 aa13.18□□□□□ -0.3
PARVB-201ENST00000338758 OR7G1Q8NGA0 311 aa13.18□□□□□ -0.3
PARVB-201ENST00000338758 TSLPQ969D9 159 aa13.18□□□□□ -0.3
PARVB-201ENST00000338758 TMIGD2Q96BF3 282 aa13.18□□□□□ -0.3
PARVB-201ENST00000338758 CHRDQ9H2X0 955 aa13.18□□□□□ -0.3
PARVB-201ENST00000338758 SIDT1Q9NXL6 827 aaKnown RBP13.18□□□□□ -0.3
PARVB-201ENST00000338758 SCP2D1Q9UJQ7 156 aa13.18□□□□□ -0.3
PARVB-201ENST00000338758 C19orf53Q9UNZ5 99 aaPredicted RBP13.18□□□□□ -0.3
PARVB-201ENST00000338758 SH2B3Q9UQQ2 575 aa13.18□□□□□ -0.3
PARVB-201ENST00000338758 SVILO95425 2214 aa13.18□□□□□ -0.3
PARVB-201ENST00000338758 MTRF1O75570 445 aaKnown RBP13.18□□□□□ -0.3
PARVB-201ENST00000338758 PRKAR1BP31321 381 aa13.18□□□□□ -0.3
PARVB-201ENST00000338758 BMXP51813 675 aa13.18□□□□□ -0.3
PARVB-201ENST00000338758 SWI5Q1ZZU3 235 aa13.18□□□□□ -0.3
PARVB-201ENST00000338758 MARCH3Q86UD3 253 aa13.18□□□□□ -0.3
PARVB-201ENST00000338758 GRAMD2AQ8IUY3 354 aa13.18□□□□□ -0.3
PARVB-201ENST00000338758 SIRT6Q8N6T7 355 aa13.18□□□□□ -0.3
PARVB-201ENST00000338758 DUSP22Q9NRW4 184 aa13.18□□□□□ -0.3
PARVB-201ENST00000338758 NUFIP1Q9UHK0 495 aaKnown RBP13.18□□□□□ -0.3
PARVB-201ENST00000338758 TEX13CA0A0J9YWL9 993 aa13.18□□□□□ -0.3
PARVB-201ENST00000338758 NME1P15531 152 aaKnown RBP13.18□□□□□ -0.3
PARVB-201ENST00000338758 B3GLCTQ6Y288 498 aa13.18□□□□□ -0.3
PARVB-201ENST00000338758 METTL8Q9H825 291 aaKnown RBP13.18□□□□□ -0.3
PARVB-201ENST00000338758 ST14Q9Y5Y6 855 aa13.18□□□□□ -0.3
PARVB-201ENST00000338758 ABOP16442 354 aa13.18□□□□□ -0.3
PARVB-201ENST00000338758 C6orf15Q6UXA7 325 aaPredicted RBP13.18□□□□□ -0.3
PARVB-201ENST00000338758 FOXRED2Q8IWF2 684 aa13.18□□□□□ -0.3
PARVB-201ENST00000338758 RNF113BQ8IZP6 322 aaKnown RBP13.18□□□□□ -0.3
PARVB-201ENST00000338758 ENKD1Q9H0I2 346 aa13.18□□□□□ -0.3
PARVB-201ENST00000338758 SMURF1Q9HCE7 757 aa13.18□□□□□ -0.3
PARVB-201ENST00000338758 MED11Q9P086 117 aa13.18□□□□□ -0.3
PARVB-201ENST00000338758 IGLV3-16A0A075B6K0 115 aa13.17□□□□□ -0.3
PARVB-201ENST00000338758 TSPAN11A1L157 253 aa13.17□□□□□ -0.3
PARVB-201ENST00000338758 DCDC2BA2VCK2 349 aa13.17□□□□□ -0.3
PARVB-201ENST00000338758 RAD51DO75771 328 aa13.17□□□□□ -0.3
PARVB-201ENST00000338758 IGHG1P01857 330 aa13.17□□□□□ -0.3
PARVB-201ENST00000338758 UCHL1P09936 223 aa13.17□□□□□ -0.3
PARVB-201ENST00000338758 ZNF322Q6U7Q0 402 aaPredicted RBP13.17□□□□□ -0.3
PARVB-201ENST00000338758 MISPQ8IVT2 679 aa13.17□□□□□ -0.3
PARVB-201ENST00000338758 CADM4Q8NFZ8 388 aa13.17□□□□□ -0.3
PARVB-201ENST00000338758 ZNF419Q96HQ0 510 aaPredicted RBP13.17□□□□□ -0.3
PARVB-201ENST00000338758 CDCP1Q9H5V8 836 aa13.17□□□□□ -0.3
PARVB-201ENST00000338758 EEF1E1O43324 174 aaKnown RBP13.17□□□□□ -0.3
PARVB-201ENST00000338758 MOSPD3O75425 235 aa13.17□□□□□ -0.3
PARVB-201ENST00000338758 DDAH2O95865 285 aa13.17□□□□□ -0.3
PARVB-201ENST00000338758 ZNF16P17020 682 aaPredicted RBP13.17□□□□□ -0.3
PARVB-201ENST00000338758 MCCD1P59942 119 aaPredicted RBP13.17□□□□□ -0.3
PARVB-201ENST00000338758 ZNF91Q05481 1191 aa13.17□□□□□ -0.3
PARVB-201ENST00000338758 RAB40BQ12829 278 aa13.17□□□□□ -0.3
PARVB-201ENST00000338758 DNASE1L3Q13609 305 aa13.17□□□□□ -0.3
PARVB-201ENST00000338758 VASNQ6EMK4 673 aa13.17□□□□□ -0.3
PARVB-201ENST00000338758 PTRH1Q86Y79 214 aaKnown RBP13.17□□□□□ -0.3
PARVB-201ENST00000338758 SMRP1Q8NCR6 262 aa13.17□□□□□ -0.3
PARVB-201ENST00000338758 OR4F15Q8NGB8 312 aa13.17□□□□□ -0.3
PARVB-201ENST00000338758 THSD1Q9NS62 852 aa13.17□□□□□ -0.3
PARVB-201ENST00000338758 FBXO9Q9UK97 447 aaPredicted RBP13.17□□□□□ -0.3
PARVB-201ENST00000338758 TMED7-TICAM2A0A0A6YYA0 188 aa13.17□□□□□ -0.3
PARVB-201ENST00000338758 IFNA21P01568 189 aa13.17□□□□□ -0.3
PARVB-201ENST00000338758 BSGP35613 385 aa13.17□□□□□ -0.3
PARVB-201ENST00000338758 CD97P48960 835 aa13.17□□□□□ -0.3
PARVB-201ENST00000338758 CYB561P49447 251 aa13.17□□□□□ -0.3
PARVB-201ENST00000338758 POLR2HP52434 150 aaKnown RBP13.17□□□□□ -0.3
PARVB-201ENST00000338758 YBX1P67809 324 aaKnown RBP13.17□□□□□ -0.3
PARVB-201ENST00000338758 CASTOR1Q8WTX7 329 aa13.17□□□□□ -0.3
PARVB-201ENST00000338758 FCAMRQ8WWV6 532 aa13.17□□□□□ -0.3
PARVB-201ENST00000338758 LMF1Q96S06 567 aa13.17□□□□□ -0.3
PARVB-201ENST00000338758 OR51B6Q9H340 312 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms