RNA–Protein interactions for RNA: ENST00000338045.7

LIMS1-202, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-202ENST00000338045 KNTC1P50748 2209 aa14.12□□□□□ -0.15
LIMS1-202ENST00000338045 HTR3EA5X5Y0 456 aa14.12□□□□□ -0.15
LIMS1-202ENST00000338045 CLCA1A8K7I4 914 aa14.12□□□□□ -0.15
LIMS1-202ENST00000338045 OR2J2O76002 312 aa14.12□□□□□ -0.15
LIMS1-202ENST00000338045 PCMT1P22061 227 aa14.12□□□□□ -0.15
LIMS1-202ENST00000338045 SLC1A3P43003 542 aa14.12□□□□□ -0.15
LIMS1-202ENST00000338045 SSPNQ14714 243 aa14.12□□□□□ -0.15
LIMS1-202ENST00000338045 OCLNQ16625 522 aa14.12□□□□□ -0.15
LIMS1-202ENST00000338045 RPL13AP3Q6NVV1 102 aa14.12□□□□□ -0.15
LIMS1-202ENST00000338045 PRSS48Q7RTY5 328 aa14.12□□□□□ -0.15
LIMS1-202ENST00000338045 TCEANCQ8N8B7 351 aa14.12□□□□□ -0.15
LIMS1-202ENST00000338045 OR4Q3Q8NH05 313 aa14.12□□□□□ -0.15
LIMS1-202ENST00000338045 SH3YL1Q96HL8 342 aaPredicted RBP14.12□□□□□ -0.15
LIMS1-202ENST00000338045 Q96MT0 163 aa14.12□□□□□ -0.15
LIMS1-202ENST00000338045 RASL10BQ96S79 203 aa14.12□□□□□ -0.15
LIMS1-202ENST00000338045 FAM117AQ9C073 453 aa14.12□□□□□ -0.15
LIMS1-202ENST00000338045 OR52D1Q9H346 318 aa14.12□□□□□ -0.15
LIMS1-202ENST00000338045 TBC1D23Q9NUY8 699 aa14.12□□□□□ -0.15
LIMS1-202ENST00000338045 IGKV1D-42A0A075B6H8 117 aa14.11□□□□□ -0.15
LIMS1-202ENST00000338045 NSG1A0A0A6YYJ2 146 aa14.11□□□□□ -0.15
LIMS1-202ENST00000338045 ENO4A6NNW6 628 aa14.11□□□□□ -0.15
LIMS1-202ENST00000338045 C17orf51A8MQB3 221 aa14.11□□□□□ -0.15
LIMS1-202ENST00000338045 EFCAB9A8MZ26 197 aa14.11□□□□□ -0.15
LIMS1-202ENST00000338045 TERTO14746 1132 aaKnown RBP14.11□□□□□ -0.15
LIMS1-202ENST00000338045 RGS10O43665 173 aa14.11□□□□□ -0.15
LIMS1-202ENST00000338045 SCO2O43819 266 aa14.11□□□□□ -0.15
LIMS1-202ENST00000338045 PRKYO43930 277 aa14.11□□□□□ -0.15
LIMS1-202ENST00000338045 PTP4A3O75365 173 aa14.11□□□□□ -0.15
LIMS1-202ENST00000338045 PGCP20142 388 aa14.11□□□□□ -0.15
LIMS1-202ENST00000338045 P2RX1P51575 399 aa14.11□□□□□ -0.15
LIMS1-202ENST00000338045 GAS1P54826 345 aa14.11□□□□□ -0.15
LIMS1-202ENST00000338045 RPS18P62269 152 aaKnown RBP14.11□□□□□ -0.15
LIMS1-202ENST00000338045 CRYZQ08257 329 aaKnown RBP14.11□□□□□ -0.15
LIMS1-202ENST00000338045 NTRK2Q16620 822 aa14.11□□□□□ -0.15
LIMS1-202ENST00000338045 ARMC10Q8N2F6 343 aa14.11□□□□□ -0.15
LIMS1-202ENST00000338045 GGHQ92820 318 aa14.11□□□□□ -0.15
LIMS1-202ENST00000338045 TUBA1CQ9BQE3 449 aa14.11□□□□□ -0.15
LIMS1-202ENST00000338045 TMEM43Q9BTV4 400 aa14.11□□□□□ -0.15
LIMS1-202ENST00000338045 PRRG3Q9BZD7 231 aa14.11□□□□□ -0.15
LIMS1-202ENST00000338045 VCX3AQ9NNX9 186 aa14.11□□□□□ -0.15
LIMS1-202ENST00000338045 SNX5Q9Y5X3 404 aa14.11□□□□□ -0.15
LIMS1-202ENST00000338045 C21orf140B9A014 251 aa14.1□□□□□ -0.15
LIMS1-202ENST00000338045 RCBTB2O95199 551 aa14.1□□□□□ -0.15
LIMS1-202ENST00000338045 CELA2AP08217 269 aa14.1□□□□□ -0.15
LIMS1-202ENST00000338045 FTH1P19P0C7X4 201 aa14.1□□□□□ -0.15
LIMS1-202ENST00000338045 FUT1P19526 365 aa14.1□□□□□ -0.15
LIMS1-202ENST00000338045 SLC15A1P46059 708 aa14.1□□□□□ -0.15
LIMS1-202ENST00000338045 NUDT6P53370 316 aa14.1□□□□□ -0.15
LIMS1-202ENST00000338045 LIMK1P53667 647 aa14.1□□□□□ -0.15
LIMS1-202ENST00000338045 RPS15P62841 145 aaKnown RBP14.1□□□□□ -0.15
LIMS1-202ENST00000338045 PMS2P3Q13401 168 aa14.1□□□□□ -0.15
LIMS1-202ENST00000338045 FHL1Q13642 323 aa14.1□□□□□ -0.15
LIMS1-202ENST00000338045 CBFBQ13951 182 aa14.1□□□□□ -0.15
LIMS1-202ENST00000338045 PGGHGQ32M88 737 aa14.1□□□□□ -0.15
LIMS1-202ENST00000338045 ZBED5Q49AG3 693 aa14.1□□□□□ -0.15
LIMS1-202ENST00000338045 CLEC12AQ5QGZ9 265 aa14.1□□□□□ -0.15
LIMS1-202ENST00000338045 GTF2IRD2BQ6EKJ0 949 aa14.1□□□□□ -0.15
LIMS1-202ENST00000338045 SLC30A6Q6NXT4 461 aa14.1□□□□□ -0.15
LIMS1-202ENST00000338045 AHSA2Q719I0 299 aa14.1□□□□□ -0.15
LIMS1-202ENST00000338045 GTF2IRD2Q86UP8 949 aa14.1□□□□□ -0.15
LIMS1-202ENST00000338045 NLGN4YQ8NFZ3 816 aaPredicted RBP14.1□□□□□ -0.15
LIMS1-202ENST00000338045 OR2T33Q8NG76 320 aa14.1□□□□□ -0.15
LIMS1-202ENST00000338045 OR5M3Q8NGP4 307 aa14.1□□□□□ -0.15
LIMS1-202ENST00000338045 OR13C2Q8NGS9 318 aa14.1□□□□□ -0.15
LIMS1-202ENST00000338045 FANK1Q8TC84 345 aa14.1□□□□□ -0.15
LIMS1-202ENST00000338045 DGCR14Q96DF8 476 aaKnown RBP14.1□□□□□ -0.15
LIMS1-202ENST00000338045 SAMD8Q96LT4 415 aa14.1□□□□□ -0.15
LIMS1-202ENST00000338045 GPR87Q9BY21 358 aa14.1□□□□□ -0.15
LIMS1-202ENST00000338045 HHATLQ9HCP6 504 aa14.1□□□□□ -0.15
LIMS1-202ENST00000338045 AMBNQ9NP70 447 aa14.1□□□□□ -0.15
LIMS1-202ENST00000338045 RYDENQ9NUL5 291 aaKnown RBP14.1□□□□□ -0.15
LIMS1-202ENST00000338045 CNOT2Q9NZN8 540 aaKnown RBP14.1□□□□□ -0.15
LIMS1-202ENST00000338045 ELOA3DA6NLF2 546 aaPredicted RBP14.1□□□□□ -0.15
LIMS1-202ENST00000338045 TLX2O43763 284 aaPredicted RBP14.1□□□□□ -0.15
LIMS1-202ENST00000338045 HCN1O60741 890 aa14.1□□□□□ -0.15
LIMS1-202ENST00000338045 ENTPD6O75354 484 aa14.1□□□□□ -0.15
LIMS1-202ENST00000338045 TNFSF15O95150 251 aa14.1□□□□□ -0.15
LIMS1-202ENST00000338045 SAGP10523 405 aaPredicted RBP14.1□□□□□ -0.15
LIMS1-202ENST00000338045 TTKP33981 857 aa14.1□□□□□ -0.15
LIMS1-202ENST00000338045 EMX1Q04741 257 aaPredicted RBP14.1□□□□□ -0.15
LIMS1-202ENST00000338045 C17orf67Q0P5P2 114 aa14.1□□□□□ -0.15
LIMS1-202ENST00000338045 NEDD8Q15843 81 aa14.1□□□□□ -0.15
LIMS1-202ENST00000338045 SNAPC1Q16533 368 aa14.1□□□□□ -0.15
LIMS1-202ENST00000338045 ZNF791Q3KP31 576 aaPredicted RBP14.1□□□□□ -0.15
LIMS1-202ENST00000338045 ELOA3BQ3SY89 546 aa14.1□□□□□ -0.15
LIMS1-202ENST00000338045 MEDAGQ5VYS4 303 aa14.1□□□□□ -0.15
LIMS1-202ENST00000338045 GPR141Q7Z602 305 aa14.1□□□□□ -0.15
LIMS1-202ENST00000338045 SLC43A2Q8N370 569 aa14.1□□□□□ -0.15
LIMS1-202ENST00000338045 ELOA3Q8NG57 546 aa14.1□□□□□ -0.15
LIMS1-202ENST00000338045 ZNF563Q8TA94 476 aa14.1□□□□□ -0.15
LIMS1-202ENST00000338045 TMEM163Q8TC26 289 aa14.1□□□□□ -0.15
LIMS1-202ENST00000338045 DUSP19Q8WTR2 217 aa14.1□□□□□ -0.15
LIMS1-202ENST00000338045 SPACA9Q96E40 222 aaPredicted RBP14.1□□□□□ -0.15
LIMS1-202ENST00000338045 SLC38A2Q96QD8 506 aa14.1□□□□□ -0.15
LIMS1-202ENST00000338045 COPS4Q9BT78 406 aa14.1□□□□□ -0.15
LIMS1-202ENST00000338045 UBQLN3Q9H347 655 aa14.1□□□□□ -0.15
LIMS1-202ENST00000338045 ZNF160Q9HCG1 818 aa14.1□□□□□ -0.15
LIMS1-202ENST00000338045 MED17Q9NVC6 651 aa14.1□□□□□ -0.15
LIMS1-202ENST00000338045 CEPT1Q9Y6K0 416 aa14.1□□□□□ -0.15
LIMS1-202ENST00000338045 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms