RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 CLEC9AQ6UXN8 241 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 RSPRY1Q96DX4 576 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 KLRG1Q96E93 195 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 C1orf74Q96LT6 269 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 PRRC1Q96M27 445 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 SORCS2Q96PQ0 1159 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 DPH7Q9BTV6 452 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.2□□□□□ -0.94
COL4A6-201ENST00000334504 TRAV27A0A087WT01 109 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.2□□□□□ -0.94
COL4A6-201ENST00000334504 C17orf112F2Z3M2 114 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 SOCS5O75159 536 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 ZNF780AO75290 641 aaPredicted RBP9.2□□□□□ -0.94
COL4A6-201ENST00000334504 FBLP22087 321 aaKnown RBP9.2□□□□□ -0.94
COL4A6-201ENST00000334504 CRABP1P29762 137 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 CLDN12P56749 244 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 RPS15AP62244 130 aaKnown RBP9.2□□□□□ -0.94
COL4A6-201ENST00000334504 HNF4GQ14541 408 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 SLC10A1Q14973 349 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 HAVCR2Q8TDQ0 301 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 IL1F10Q8WWZ1 152 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 BTF3L4Q96K17 158 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 SEC22CQ9BRL7 303 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 FAM103A1Q9BTL3 118 aaKnown RBP9.2□□□□□ -0.94
COL4A6-201ENST00000334504 C1QTNF2Q9BXJ5 285 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 INPP5EQ9NRR6 644 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 SLC39A9Q9NUM3 307 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 ZMAT5Q9UDW3 170 aaKnown RBP9.2□□□□□ -0.94
COL4A6-201ENST00000334504 ANGPTL7O43827 346 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 LEFTY1O75610 366 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 AKR1C1Q04828 323 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 PDLIM3Q53GG5 364 aaPredicted RBP9.2□□□□□ -0.94
COL4A6-201ENST00000334504 ZNF776Q68DI1 518 aaPredicted RBP9.2□□□□□ -0.94
COL4A6-201ENST00000334504 SLC6A19Q695T7 634 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 NLGN4XQ8N0W4 816 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 AVL9Q8NBF6 648 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 LGALS14Q8TCE9 139 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 BMFQ96LC9 184 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 DHRS9Q9BPW9 319 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 ASH2LQ9UBL3 628 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 WNT6Q9Y6F9 365 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 RNASET2O00584 256 aaKnown RBP9.2□□□□□ -0.94
COL4A6-201ENST00000334504 PTHP01270 115 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 SLC10A3P09131 477 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 TSFMP43897 325 aaKnown RBP9.2□□□□□ -0.94
COL4A6-201ENST00000334504 RAP1AP62834 184 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 BAXQ07812 192 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 CAMK2DQ13557 499 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 LBX2Q6XYB7 198 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 SSX7Q7RTT5 188 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 SHDQ96IW2 340 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 HCAR1Q9BXC0 346 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 PPP1R14DQ9NXH3 145 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 BCL9O00512 1426 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 LATO43561 262 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 FGF4P08620 206 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 HRH2P25021 359 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 TAS2R46P59540 309 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 TNFRSF17Q02223 184 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 RPE65Q16518 533 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 SHEQ5VZ18 495 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 DBX2Q6ZNG2 339 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 SPRED1Q7Z699 444 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 RETREG3Q86VR2 466 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 ZC3H3Q8IXZ2 948 aaKnown RBP9.2□□□□□ -0.94
COL4A6-201ENST00000334504 FOXN4Q96NZ1 517 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 SMG9Q9H0W8 520 aaKnown RBP9.2□□□□□ -0.94
COL4A6-201ENST00000334504 SLC6A17Q9H1V8 727 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 PIGMQ9H3S5 423 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 SIX4Q9UIU6 781 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 KAT6AQ92794 2004 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 ABCC6O95255 1503 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 TRAV20A0A0B4J274 112 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 TGOLN2O43493 480 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 DBHP09172 617 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 ELK1P19419 428 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 EMP2P54851 167 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 HOXC5Q00444 222 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 ZNF91Q05481 1191 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 CORO6Q6QEF8 472 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 KDELC1Q6UW63 502 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 NECTIN4Q96NY8 510 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 SEMA4GQ9NTN9 838 aa9.2□□□□□ -0.94
COL4A6-201ENST00000334504 NPIPA5A0A0B4J1W7 369 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 PRAMEF27A3QJZ7 478 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 SEC14L5O43304 696 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 SCG5P05408 212 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 FAM163BP0C2L3 166 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 DAPP51397 102 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 PITX1P78337 314 aaPredicted RBP9.19□□□□□ -0.94
COL4A6-201ENST00000334504 PGGHGQ32M88 737 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 PLK5Q496M5 336 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 ATPAF1Q5TC12 328 aaPredicted RBP9.19□□□□□ -0.94
COL4A6-201ENST00000334504 FAM69BQ5VUD6 431 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 PRAMEF9Q5VWM5 478 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 HBMQ6B0K9 141 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 ZNF322Q6U7Q0 402 aaPredicted RBP9.19□□□□□ -0.94
COL4A6-201ENST00000334504 GTF2H5Q6ZYL4 71 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 WDTC1Q8N5D0 677 aa9.19□□□□□ -0.94
COL4A6-201ENST00000334504 CDS1Q92903 461 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms