RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 Q6ZT83 130 aa10.93□□□□□ -0.66
TPM3-204ENST00000323144 FBXW5Q969U6 566 aa10.93□□□□□ -0.66
TPM3-204ENST00000323144 TESCQ96BS2 214 aa10.93□□□□□ -0.66
TPM3-204ENST00000323144 ROPN1LQ96C74 230 aa10.93□□□□□ -0.66
TPM3-204ENST00000323144 ZIM3Q96PE6 472 aa10.93□□□□□ -0.66
TPM3-204ENST00000323144 SLC35A5Q9BS91 424 aa10.93□□□□□ -0.66
TPM3-204ENST00000323144 CXorf56Q9H5V9 222 aa10.93□□□□□ -0.66
TPM3-204ENST00000323144 GP6Q9HCN6 339 aa10.93□□□□□ -0.66
TPM3-204ENST00000323144 FANCFQ9NPI8 374 aa10.93□□□□□ -0.66
TPM3-204ENST00000323144 CTPS2Q9NRF8 586 aa10.93□□□□□ -0.66
TPM3-204ENST00000323144 PNPOQ9NVS9 261 aa10.93□□□□□ -0.66
TPM3-204ENST00000323144 HAO1Q9UJM8 370 aa10.93□□□□□ -0.66
TPM3-204ENST00000323144 SDHDO14521 159 aa10.92□□□□□ -0.66
TPM3-204ENST00000323144 CD3EP07766 207 aa10.92□□□□□ -0.66
TPM3-204ENST00000323144 CHRM4P08173 479 aa10.92□□□□□ -0.66
TPM3-204ENST00000323144 MYZAPP0CAP1 466 aa10.92□□□□□ -0.66
TPM3-204ENST00000323144 PGCP20142 388 aa10.92□□□□□ -0.66
TPM3-204ENST00000323144 UQCRC2P22695 453 aa10.92□□□□□ -0.66
TPM3-204ENST00000323144 IL12AP29459 219 aa10.92□□□□□ -0.66
TPM3-204ENST00000323144 RYKP34925 604 aa10.92□□□□□ -0.66
TPM3-204ENST00000323144 SLC1A6P48664 564 aa10.92□□□□□ -0.66
TPM3-204ENST00000323144 BST1Q10588 318 aa10.92□□□□□ -0.66
TPM3-204ENST00000323144 FAPQ12884 760 aa10.92□□□□□ -0.66
TPM3-204ENST00000323144 VEZF1Q14119 521 aa10.92□□□□□ -0.66
TPM3-204ENST00000323144 CASP8Q14790 479 aa10.92□□□□□ -0.66
TPM3-204ENST00000323144 SMU1Q2TAY7 513 aa10.92□□□□□ -0.66
TPM3-204ENST00000323144 ZNF672Q499Z4 452 aaPredicted RBP10.92□□□□□ -0.66
TPM3-204ENST00000323144 GTF2IRD2BQ6EKJ0 949 aa10.92□□□□□ -0.66
TPM3-204ENST00000323144 EIF3MQ7L2H7 374 aaKnown RBP10.92□□□□□ -0.66
TPM3-204ENST00000323144 GTF2IRD2Q86UP8 949 aa10.92□□□□□ -0.66
TPM3-204ENST00000323144 HOMEZQ8IX15 550 aa10.92□□□□□ -0.66
TPM3-204ENST00000323144 SLC43A2Q8N370 569 aa10.92□□□□□ -0.66
TPM3-204ENST00000323144 ANKFN1Q8N957 763 aa10.92□□□□□ -0.66
TPM3-204ENST00000323144 PNPT1Q8TCS8 783 aaKnown RBP10.92□□□□□ -0.66
TPM3-204ENST00000323144 NEURL3Q96EH8 262 aa10.92□□□□□ -0.66
TPM3-204ENST00000323144 ARL5BQ96KC2 179 aa10.92□□□□□ -0.66
TPM3-204ENST00000323144 INPP5KQ9BT40 448 aa10.92□□□□□ -0.66
TPM3-204ENST00000323144 BDH2Q9BUT1 245 aa10.92□□□□□ -0.66
TPM3-204ENST00000323144 CCDC106Q9BWC9 280 aa10.92□□□□□ -0.66
TPM3-204ENST00000323144 CENPHQ9H3R5 247 aa10.92□□□□□ -0.66
TPM3-204ENST00000323144 ACER3Q9NUN7 267 aa10.92□□□□□ -0.66
TPM3-204ENST00000323144 EXD2Q9NVH0 621 aa10.92□□□□□ -0.66
TPM3-204ENST00000323144 AIG1Q9NVV5 245 aa10.92□□□□□ -0.66
TPM3-204ENST00000323144 MARCOQ9UEW3 520 aaPredicted RBP10.92□□□□□ -0.66
TPM3-204ENST00000323144 CHD3Q12873 2000 aaKnown RBP10.92□□□□□ -0.66
TPM3-204ENST00000323144 ANK3Q12955 4377 aaKnown RBP10.92□□□□□ -0.66
TPM3-204ENST00000323144 DPRXA6NFQ7 191 aa10.91□□□□□ -0.66
TPM3-204ENST00000323144 DUXAA6NLW8 204 aa10.91□□□□□ -0.66
TPM3-204ENST00000323144 ZNF716A6NP11 495 aa10.91□□□□□ -0.66
TPM3-204ENST00000323144 KIAA1324LA8MWY0 1029 aaPredicted RBP10.91□□□□□ -0.66
TPM3-204ENST00000323144 HMGN4O00479 90 aa10.91□□□□□ -0.66
TPM3-204ENST00000323144 TM9SF1O15321 606 aa10.91□□□□□ -0.66
TPM3-204ENST00000323144 BIRC5O15392 142 aa10.91□□□□□ -0.66
TPM3-204ENST00000323144 NDUFS7O75251 213 aa10.91□□□□□ -0.66
TPM3-204ENST00000323144 RAD51DO75771 328 aa10.91□□□□□ -0.66
TPM3-204ENST00000323144 SOX30O94993 753 aa10.91□□□□□ -0.66
TPM3-204ENST00000323144 DANCRP0C864 163 aa10.91□□□□□ -0.66
TPM3-204ENST00000323144 TFPIP10646 304 aa10.91□□□□□ -0.66
TPM3-204ENST00000323144 CCNA2P20248 432 aa10.91□□□□□ -0.66
TPM3-204ENST00000323144 CHI3L1P36222 383 aaPredicted RBP10.91□□□□□ -0.66
TPM3-204ENST00000323144 RPL14P50914 215 aaKnown RBP10.91□□□□□ -0.66
TPM3-204ENST00000323144 CDH11P55287 796 aa10.91□□□□□ -0.66
TPM3-204ENST00000323144 FOXG1P55316 489 aaPredicted RBP10.91□□□□□ -0.66
TPM3-204ENST00000323144 UFM1P61960 85 aa10.91□□□□□ -0.66
TPM3-204ENST00000323144 HPCAP84074 193 aa10.91□□□□□ -0.66
TPM3-204ENST00000323144 CHRNEQ04844 493 aa10.91□□□□□ -0.66
TPM3-204ENST00000323144 ITGADQ13349 1161 aa10.91□□□□□ -0.66
TPM3-204ENST00000323144 TNK1Q13470 666 aa10.91□□□□□ -0.66
TPM3-204ENST00000323144 SYPL1Q16563 259 aa10.91□□□□□ -0.66
TPM3-204ENST00000323144 PGGHGQ32M88 737 aa10.91□□□□□ -0.66
TPM3-204ENST00000323144 GPAT3Q53EU6 434 aa10.91□□□□□ -0.66
TPM3-204ENST00000323144 COX20Q5RI15 118 aa10.91□□□□□ -0.66
TPM3-204ENST00000323144 CEP85LQ5SZL2 805 aa10.91□□□□□ -0.66
TPM3-204ENST00000323144 RNF130Q86XS8 419 aa10.91□□□□□ -0.66
TPM3-204ENST00000323144 ANKRD42Q8N9B4 389 aa10.91□□□□□ -0.66
TPM3-204ENST00000323144 ZNF563Q8TA94 476 aa10.91□□□□□ -0.66
TPM3-204ENST00000323144 PIWIL2Q8TC59 973 aaKnown RBP10.91□□□□□ -0.66
TPM3-204ENST00000323144 SLC25A43Q8WUT9 341 aaPredicted RBP10.91□□□□□ -0.66
TPM3-204ENST00000323144 XAGE5Q8WWM1 108 aa10.91□□□□□ -0.66
TPM3-204ENST00000323144 CNOT9Q92600 299 aaKnown RBP10.91□□□□□ -0.66
TPM3-204ENST00000323144 ZG16BQ96DA0 208 aa10.91□□□□□ -0.66
TPM3-204ENST00000323144 CCDC115Q96NT0 180 aa10.91□□□□□ -0.66
TPM3-204ENST00000323144 TRIM2Q9C040 744 aa10.91□□□□□ -0.66
TPM3-204ENST00000323144 SLC38A1Q9H2H9 487 aa10.91□□□□□ -0.66
TPM3-204ENST00000323144 MEAF6Q9HAF1 191 aa10.91□□□□□ -0.66
TPM3-204ENST00000323144 SSU72Q9NP77 194 aaKnown RBP10.91□□□□□ -0.66
TPM3-204ENST00000323144 SLC6A13Q9NSD5 602 aa10.91□□□□□ -0.66
TPM3-204ENST00000323144 CHRNA9Q9UGM1 479 aa10.91□□□□□ -0.66
TPM3-204ENST00000323144 SLC35A3Q9Y2D2 325 aa10.91□□□□□ -0.66
TPM3-204ENST00000323144 ABCA2Q9BZC7 2435 aa10.91□□□□□ -0.66
TPM3-204ENST00000323144 IGKV3D-15A0A087WSY6 115 aa10.9□□□□□ -0.66
TPM3-204ENST00000323144 GOLGA8QA0A0J9YX86 632 aa10.9□□□□□ -0.66
TPM3-204ENST00000323144 PRSS51A0A1B0GVH4 220 aa10.9□□□□□ -0.66
TPM3-204ENST00000323144 A0A1W2PP18 115 aa10.9□□□□□ -0.66
TPM3-204ENST00000323144 A0A1W2PR80 420 aa10.9□□□□□ -0.66
TPM3-204ENST00000323144 GOLGA8OA6NCC3 632 aa10.9□□□□□ -0.66
TPM3-204ENST00000323144 ZNF724A8MTY0 619 aa10.9□□□□□ -0.66
TPM3-204ENST00000323144 FAM171A2A8MVW0 826 aa10.9□□□□□ -0.66
TPM3-204ENST00000323144 SHISA9B4DS77 424 aa10.9□□□□□ -0.66
TPM3-204ENST00000323144 RNF223E7ERA6 249 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms