RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 MEIOBQ8N635 442 aa12.66□□□□□ -0.38
DDX54-202ENST00000314045 CDC6Q99741 560 aa12.66□□□□□ -0.38
DDX54-202ENST00000314045 KATNB1Q9BVA0 655 aa12.66□□□□□ -0.38
DDX54-202ENST00000314045 RBM24Q9BX46 236 aaKnown RBP12.66□□□□□ -0.38
DDX54-202ENST00000314045 DUX4Q9UBX2 424 aa12.66□□□□□ -0.38
DDX54-202ENST00000314045 A0A087WUU8 490 aa12.66□□□□□ -0.38
DDX54-202ENST00000314045 A6NIZ1 184 aa12.66□□□□□ -0.38
DDX54-202ENST00000314045 MEN1O00255 615 aa12.66□□□□□ -0.38
DDX54-202ENST00000314045 IGHV4-34P06331 123 aa12.66□□□□□ -0.38
DDX54-202ENST00000314045 ITGA5P08648 1049 aa12.66□□□□□ -0.38
DDX54-202ENST00000314045 IDUAP35475 653 aa12.66□□□□□ -0.38
DDX54-202ENST00000314045 MPLP40238 635 aa12.66□□□□□ -0.38
DDX54-202ENST00000314045 RAP1BP61224 184 aa12.66□□□□□ -0.38
DDX54-202ENST00000314045 RAP1AP62834 184 aa12.66□□□□□ -0.38
DDX54-202ENST00000314045 ADAM8P78325 824 aa12.66□□□□□ -0.38
DDX54-202ENST00000314045 ARFRP1Q13795 201 aa12.66□□□□□ -0.38
DDX54-202ENST00000314045 TBC1D25Q3MII6 688 aa12.66□□□□□ -0.38
DDX54-202ENST00000314045 ANKDD1AQ495B1 522 aa12.66□□□□□ -0.38
DDX54-202ENST00000314045 GPR139Q6DWJ6 353 aa12.66□□□□□ -0.38
DDX54-202ENST00000314045 MISPQ8IVT2 679 aa12.66□□□□□ -0.38
DDX54-202ENST00000314045 OR2I1PQ8NGU4 316 aa12.66□□□□□ -0.38
DDX54-202ENST00000314045 C8orf44Q96CB5 159 aa12.66□□□□□ -0.38
DDX54-202ENST00000314045 KLHL15Q96M94 604 aa12.66□□□□□ -0.38
DDX54-202ENST00000314045 ANKRD19PQ9H560 264 aa12.66□□□□□ -0.38
DDX54-202ENST00000314045 FAM60AQ9NP50 221 aa12.66□□□□□ -0.38
DDX54-202ENST00000314045 NPFFR2Q9Y5X5 522 aa12.66□□□□□ -0.38
DDX54-202ENST00000314045 MIA3Q5JRA6 1907 aa12.65□□□□□ -0.38
DDX54-202ENST00000314045 GDF1P27539 372 aa12.65□□□□□ -0.38
DDX54-202ENST00000314045 TSPAN5P62079 268 aa12.65□□□□□ -0.38
DDX54-202ENST00000314045 TMEM176BQ3YBM2 270 aaPredicted RBP12.65□□□□□ -0.38
DDX54-202ENST00000314045 TP53I3Q53FA7 332 aa12.65□□□□□ -0.38
DDX54-202ENST00000314045 PGBD2Q6P3X8 592 aa12.65□□□□□ -0.38
DDX54-202ENST00000314045 CMIPQ8IY22 773 aa12.65□□□□□ -0.38
DDX54-202ENST00000314045 DNAJC22Q8N4W6 341 aa12.65□□□□□ -0.38
DDX54-202ENST00000314045 GOT1L1Q8NHS2 421 aaPredicted RBP12.65□□□□□ -0.38
DDX54-202ENST00000314045 GAB3Q8WWW8 586 aa12.65□□□□□ -0.38
DDX54-202ENST00000314045 SEMA4GQ9NTN9 838 aa12.65□□□□□ -0.38
DDX54-202ENST00000314045 ZNF222Q9UK12 451 aa12.65□□□□□ -0.38
DDX54-202ENST00000314045 CIB4A0PJX0 185 aa12.65□□□□□ -0.38
DDX54-202ENST00000314045 CENPBD1B2RD01 187 aa12.65□□□□□ -0.38
DDX54-202ENST00000314045 LILRB5O75023 590 aa12.65□□□□□ -0.38
DDX54-202ENST00000314045 EPHA8P29322 1005 aaPredicted RBP12.65□□□□□ -0.38
DDX54-202ENST00000314045 AQP2P41181 271 aa12.65□□□□□ -0.38
DDX54-202ENST00000314045 FASLGP48023 281 aa12.65□□□□□ -0.38
DDX54-202ENST00000314045 SIGLEC14Q08ET2 396 aa12.65□□□□□ -0.38
DDX54-202ENST00000314045 DHRS4L2Q6PKH6 230 aa12.65□□□□□ -0.38
DDX54-202ENST00000314045 CCDC80Q76M96 950 aa12.65□□□□□ -0.38
DDX54-202ENST00000314045 CALHM3Q86XJ0 350 aa12.65□□□□□ -0.38
DDX54-202ENST00000314045 SNX29P2Q8IUI4 249 aa12.65□□□□□ -0.38
DDX54-202ENST00000314045 UBE2FQ969M7 185 aa12.65□□□□□ -0.38
DDX54-202ENST00000314045 PALMDQ9NP74 551 aa12.65□□□□□ -0.38
DDX54-202ENST00000314045 KCND3Q9UK17 655 aa12.65□□□□□ -0.38
DDX54-202ENST00000314045 A0A1W2PPC1 479 aa12.65□□□□□ -0.38
DDX54-202ENST00000314045 C2orf72A6NCS6 295 aa12.65□□□□□ -0.38
DDX54-202ENST00000314045 AGAP5A6NIR3 686 aa12.65□□□□□ -0.38
DDX54-202ENST00000314045 CLDN24A6NM45 220 aa12.65□□□□□ -0.38
DDX54-202ENST00000314045 SLC16A7O60669 478 aa12.65□□□□□ -0.38
DDX54-202ENST00000314045 BCAS1O75363 584 aaPredicted RBP12.65□□□□□ -0.38
DDX54-202ENST00000314045 LTBRP36941 435 aa12.65□□□□□ -0.38
DDX54-202ENST00000314045 DAP3P51398 398 aaKnown RBP12.65□□□□□ -0.38
DDX54-202ENST00000314045 GLO1Q04760 184 aa12.65□□□□□ -0.38
DDX54-202ENST00000314045 SAMD12Q8N8I0 201 aa12.65□□□□□ -0.38
DDX54-202ENST00000314045 OR4F15Q8NGB8 312 aa12.65□□□□□ -0.38
DDX54-202ENST00000314045 DSN1Q9H410 356 aa12.65□□□□□ -0.38
DDX54-202ENST00000314045 TMEM9BQ9NQ34 198 aa12.65□□□□□ -0.38
DDX54-202ENST00000314045 PIKFYVEQ9Y2I7 2098 aa12.65□□□□□ -0.39
DDX54-202ENST00000314045 METTL21EPA6NDL7 271 aa12.65□□□□□ -0.39
DDX54-202ENST00000314045 ARHGAP33O14559 1287 aa12.65□□□□□ -0.39
DDX54-202ENST00000314045 SUSD5O60279 629 aa12.65□□□□□ -0.39
DDX54-202ENST00000314045 MEPCEQ7L2J0 689 aaKnown RBP12.65□□□□□ -0.39
DDX54-202ENST00000314045 EDEM2Q9BV94 578 aa12.65□□□□□ -0.39
DDX54-202ENST00000314045 MRPS2Q9Y399 296 aaKnown RBP12.65□□□□□ -0.39
DDX54-202ENST00000314045 CCL27Q9Y4X3 112 aa12.65□□□□□ -0.39
DDX54-202ENST00000314045 PHYHO14832 338 aa12.64□□□□□ -0.39
DDX54-202ENST00000314045 CHP2O43745 196 aa12.64□□□□□ -0.39
DDX54-202ENST00000314045 ADARB1P78563 741 aaKnown RBP12.64□□□□□ -0.39
DDX54-202ENST00000314045 POU3F1Q03052 451 aaPredicted RBP12.64□□□□□ -0.39
DDX54-202ENST00000314045 DUSP8Q13202 625 aa12.64□□□□□ -0.39
DDX54-202ENST00000314045 B3GLCTQ6Y288 498 aa12.64□□□□□ -0.39
DDX54-202ENST00000314045 PRICKLE2Q7Z3G6 844 aa12.64□□□□□ -0.39
DDX54-202ENST00000314045 ZNF227Q86WZ6 799 aa12.64□□□□□ -0.39
DDX54-202ENST00000314045 SLC35F2Q8IXU6 374 aa12.64□□□□□ -0.39
DDX54-202ENST00000314045 LSM14AQ8ND56 463 aaKnown RBP12.64□□□□□ -0.39
DDX54-202ENST00000314045 ARSGQ96EG1 525 aa12.64□□□□□ -0.39
DDX54-202ENST00000314045 NXF5Q9H1B4 397 aaKnown RBP12.64□□□□□ -0.39
DDX54-202ENST00000314045 FANCFQ9NPI8 374 aa12.64□□□□□ -0.39
DDX54-202ENST00000314045 ACOT13Q9NPJ3 140 aa12.64□□□□□ -0.39
DDX54-202ENST00000314045 PCOLCE2Q9UKZ9 415 aa12.64□□□□□ -0.39
DDX54-202ENST00000314045 APC2O95996 2303 aa12.64□□□□□ -0.39
DDX54-202ENST00000314045 TBX19O60806 448 aa12.64□□□□□ -0.39
DDX54-202ENST00000314045 ACP2P11117 423 aa12.64□□□□□ -0.39
DDX54-202ENST00000314045 FPR3P25089 353 aa12.64□□□□□ -0.39
DDX54-202ENST00000314045 POLR2HP52434 150 aaKnown RBP12.64□□□□□ -0.39
DDX54-202ENST00000314045 ANKRD34AQ69YU3 496 aa12.64□□□□□ -0.39
DDX54-202ENST00000314045 BPHLQ86WA6 291 aaPredicted RBP12.64□□□□□ -0.39
DDX54-202ENST00000314045 PGAM5Q96HS1 289 aa12.64□□□□□ -0.39
DDX54-202ENST00000314045 CMAHPQ9Y471 501 aa12.64□□□□□ -0.39
DDX54-202ENST00000314045 TMED7-TICAM2A0A0A6YYA0 188 aa12.64□□□□□ -0.39
DDX54-202ENST00000314045 CSTBP04080 98 aaKnown RBP12.64□□□□□ -0.39
DDX54-202ENST00000314045 ZGLP1P0C6A0 271 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms