RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 ATXN7O15265 892 aaPredicted RBP24.54■■□□□ 1.52
HDAC3-201ENST00000305264 LYPD3O95274 346 aa24.54■■□□□ 1.52
HDAC3-201ENST00000305264 IL11P20809 199 aa24.54■■□□□ 1.52
HDAC3-201ENST00000305264 SLC10A1Q14973 349 aa24.54■■□□□ 1.52
HDAC3-201ENST00000305264 ATG4DQ86TL0 474 aaPredicted RBP24.54■■□□□ 1.52
HDAC3-201ENST00000305264 OFCC1Q8IZS5 231 aa24.54■■□□□ 1.52
HDAC3-201ENST00000305264 POLR2J2Q9GZM3 115 aaKnown RBP24.54■■□□□ 1.52
HDAC3-201ENST00000305264 POLR2J3Q9H1A7 115 aaKnown RBP24.54■■□□□ 1.52
HDAC3-201ENST00000305264 TESMINQ9Y4I5 508 aa24.54■■□□□ 1.52
HDAC3-201ENST00000305264 MPDZO75970 2070 aa24.54■■□□□ 1.52
HDAC3-201ENST00000305264 NPIPA5E9PKD4 350 aa24.54■■□□□ 1.52
HDAC3-201ENST00000305264 CRYABP02511 175 aaKnown RBP24.54■■□□□ 1.52
HDAC3-201ENST00000305264 EIF1P41567 113 aaKnown RBP24.54■■□□□ 1.52
HDAC3-201ENST00000305264 ULK3Q6PHR2 472 aa24.54■■□□□ 1.52
HDAC3-201ENST00000305264 RNF217Q8TC41 542 aa24.54■■□□□ 1.52
HDAC3-201ENST00000305264 DNAJA4Q8WW22 397 aaPredicted RBP24.54■■□□□ 1.52
HDAC3-201ENST00000305264 ACKR4Q9NPB9 350 aa24.54■■□□□ 1.52
HDAC3-201ENST00000305264 MAN2C1Q9NTJ4 1040 aa24.54■■□□□ 1.52
HDAC3-201ENST00000305264 NPIPA1Q9UND3 350 aa24.54■■□□□ 1.52
HDAC3-201ENST00000305264 SLC6A5Q9Y345 797 aa24.54■■□□□ 1.52
HDAC3-201ENST00000305264 SVILO95425 2214 aa24.53■■□□□ 1.52
HDAC3-201ENST00000305264 KRT36O76013 467 aa24.53■■□□□ 1.52
HDAC3-201ENST00000305264 ZNF17P17021 662 aa24.53■■□□□ 1.52
HDAC3-201ENST00000305264 HOXB6P17509 224 aaKnown RBP24.53■■□□□ 1.52
HDAC3-201ENST00000305264 PTNP21246 168 aa24.53■■□□□ 1.52
HDAC3-201ENST00000305264 POLR2HP52434 150 aaKnown RBP24.53■■□□□ 1.52
HDAC3-201ENST00000305264 NFATC3Q12968 1075 aa24.53■■□□□ 1.52
HDAC3-201ENST00000305264 GLYR1Q49A26 553 aaPredicted RBP24.53■■□□□ 1.52
HDAC3-201ENST00000305264 WDR88Q6ZMY6 472 aa24.53■■□□□ 1.52
HDAC3-201ENST00000305264 SFXN2Q96NB2 322 aa24.53■■□□□ 1.52
HDAC3-201ENST00000305264 ZNF347Q96SE7 839 aa24.53■■□□□ 1.52
HDAC3-201ENST00000305264 PIGQQ9BRB3 760 aa24.53■■□□□ 1.52
HDAC3-201ENST00000305264 FNDC11Q9BVV2 318 aa24.53■■□□□ 1.52
HDAC3-201ENST00000305264 NMNAT1Q9HAN9 279 aaPredicted RBP24.53■■□□□ 1.52
HDAC3-201ENST00000305264 CHP2O43745 196 aa24.53■■□□□ 1.52
HDAC3-201ENST00000305264 EFNA2O43921 213 aa24.53■■□□□ 1.52
HDAC3-201ENST00000305264 GFRA1P56159 465 aa24.53■■□□□ 1.52
HDAC3-201ENST00000305264 SPIBQ01892 262 aa24.53■■□□□ 1.52
HDAC3-201ENST00000305264 SNRNP40Q96DI7 357 aaKnown RBP24.53■■□□□ 1.52
HDAC3-201ENST00000305264 CCNA2P20248 432 aa24.52■■□□□ 1.52
HDAC3-201ENST00000305264 ADH6P28332 368 aa24.52■■□□□ 1.52
HDAC3-201ENST00000305264 RRM2P31350 389 aa24.52■■□□□ 1.52
HDAC3-201ENST00000305264 HTR3AP46098 478 aa24.52■■□□□ 1.52
HDAC3-201ENST00000305264 ZFP1Q6P2D0 407 aa24.52■■□□□ 1.52
HDAC3-201ENST00000305264 TRILQ7L0X0 811 aa24.52■■□□□ 1.52
HDAC3-201ENST00000305264 ADGRG3Q86Y34 549 aa24.52■■□□□ 1.52
HDAC3-201ENST00000305264 STMN2Q93045 179 aa24.52■■□□□ 1.52
HDAC3-201ENST00000305264 SLC38A4Q969I6 547 aa24.52■■□□□ 1.52
HDAC3-201ENST00000305264 PRSS27Q9BQR3 290 aa24.52■■□□□ 1.52
HDAC3-201ENST00000305264 YY1AP1Q9H869 796 aa24.52■■□□□ 1.52
HDAC3-201ENST00000305264 S100A14Q9HCY8 104 aa24.52■■□□□ 1.52
HDAC3-201ENST00000305264 PRDM4Q9UKN5 801 aa24.52■■□□□ 1.52
HDAC3-201ENST00000305264 TMED7-TICAM2A0A0A6YYA0 188 aa24.51■■□□□ 1.51
HDAC3-201ENST00000305264 CST1P01037 141 aa24.51■■□□□ 1.51
HDAC3-201ENST00000305264 SWT1Q5T5J6 900 aaKnown RBP24.51■■□□□ 1.51
HDAC3-201ENST00000305264 ZNF324BQ6AW86 544 aaPredicted RBP24.51■■□□□ 1.51
HDAC3-201ENST00000305264 NKAIN4Q8IVV8 208 aa24.51■■□□□ 1.51
HDAC3-201ENST00000305264 PIK3C3Q8NEB9 887 aa24.51■■□□□ 1.51
HDAC3-201ENST00000305264 NR4A3Q92570 626 aa24.51■■□□□ 1.51
HDAC3-201ENST00000305264 RELTQ969Z4 430 aa24.51■■□□□ 1.51
HDAC3-201ENST00000305264 DHRS1Q96LJ7 313 aa24.51■■□□□ 1.51
HDAC3-201ENST00000305264 TMEM185BQ9H7F4 350 aa24.51■■□□□ 1.51
HDAC3-201ENST00000305264 VNN3Q9NY84 501 aa24.51■■□□□ 1.51
HDAC3-201ENST00000305264 SELENONQ9NZV5 590 aa24.51■■□□□ 1.51
HDAC3-201ENST00000305264 TMED7Q9Y3B3 224 aa24.51■■□□□ 1.51
HDAC3-201ENST00000305264 ZNF337Q9Y3M9 751 aa24.51■■□□□ 1.51
HDAC3-201ENST00000305264 IGHG3P01860 377 aa24.51■■□□□ 1.51
HDAC3-201ENST00000305264 PEPDP12955 493 aa24.51■■□□□ 1.51
HDAC3-201ENST00000305264 APOBEC1P41238 236 aaKnown RBP24.51■■□□□ 1.51
HDAC3-201ENST00000305264 ST3GAL3Q11203 375 aa24.51■■□□□ 1.51
HDAC3-201ENST00000305264 OR2T5Q6IEZ7 315 aa24.51■■□□□ 1.51
HDAC3-201ENST00000305264 OR2T29Q8NH02 315 aa24.51■■□□□ 1.51
HDAC3-201ENST00000305264 OR52J3Q8NH60 311 aa24.51■■□□□ 1.51
HDAC3-201ENST00000305264 LDAHQ9H6V9 325 aa24.51■■□□□ 1.51
HDAC3-201ENST00000305264 TRGV5A0A0B4J1U4 118 aa24.5■■□□□ 1.51
HDAC3-201ENST00000305264 ELOA3DA6NLF2 546 aaPredicted RBP24.5■■□□□ 1.51
HDAC3-201ENST00000305264 H1F0P07305 194 aaKnown RBP24.5■■□□□ 1.51
HDAC3-201ENST00000305264 ELOA3BQ3SY89 546 aa24.5■■□□□ 1.51
HDAC3-201ENST00000305264 C10orf67Q8IYJ2 551 aa24.5■■□□□ 1.51
HDAC3-201ENST00000305264 ELOA3Q8NG57 546 aa24.5■■□□□ 1.51
HDAC3-201ENST00000305264 NEIL3Q8TAT5 605 aa24.5■■□□□ 1.51
HDAC3-201ENST00000305264 FAR1Q8WVX9 515 aa24.5■■□□□ 1.51
HDAC3-201ENST00000305264 ASF1BQ9NVP2 202 aa24.5■■□□□ 1.51
HDAC3-201ENST00000305264 CHRNA9Q9UGM1 479 aa24.5■■□□□ 1.51
HDAC3-201ENST00000305264 RRP15Q9Y3B9 282 aaKnown RBP24.5■■□□□ 1.51
HDAC3-201ENST00000305264 A0A087WUJ7 227 aa24.49■■□□□ 1.51
HDAC3-201ENST00000305264 TMEM72A0PK05 275 aa24.49■■□□□ 1.51
HDAC3-201ENST00000305264 H0YHG0 523 aa24.49■■□□□ 1.51
HDAC3-201ENST00000305264 H3BML4 177 aa24.49■■□□□ 1.51
HDAC3-201ENST00000305264 SUSD5O60279 629 aa24.49■■□□□ 1.51
HDAC3-201ENST00000305264 THRBP10828 461 aa24.49■■□□□ 1.51
HDAC3-201ENST00000305264 CXCR1P25024 350 aa24.49■■□□□ 1.51
HDAC3-201ENST00000305264 ELK4P28324 431 aa24.49■■□□□ 1.51
HDAC3-201ENST00000305264 IFNA8P32881 189 aa24.49■■□□□ 1.51
HDAC3-201ENST00000305264 HSF1Q00613 529 aa24.49■■□□□ 1.51
HDAC3-201ENST00000305264 ATP6V1C2Q8NEY4 427 aa24.49■■□□□ 1.51
HDAC3-201ENST00000305264 TMEM255BQ8WV15 326 aa24.49■■□□□ 1.51
HDAC3-201ENST00000305264 LRTOMTQ8WZ04 291 aa24.49■■□□□ 1.51
HDAC3-201ENST00000305264 C12orf10Q9HB07 376 aa24.49■■□□□ 1.51
HDAC3-201ENST00000305264 TNFRSF10DQ9UBN6 386 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms