RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 TRAV27A0A087WT01 109 aa20.23■□□□□ 0.83
TPM4-201ENST00000300933 A8MUA0 341 aa20.23■□□□□ 0.83
TPM4-201ENST00000300933 SURF4O15260 269 aa20.23■□□□□ 0.83
TPM4-201ENST00000300933 PRODHO43272 600 aa20.23■□□□□ 0.83
TPM4-201ENST00000300933 KLF4O43474 513 aa20.23■□□□□ 0.83
TPM4-201ENST00000300933 TNK1Q13470 666 aa20.23■□□□□ 0.83
TPM4-201ENST00000300933 P2RY14Q15391 338 aa20.23■□□□□ 0.83
TPM4-201ENST00000300933 COL13A1Q5TAT6 717 aaPredicted RBP20.23■□□□□ 0.83
TPM4-201ENST00000300933 Q8N402 240 aa20.23■□□□□ 0.83
TPM4-201ENST00000300933 PROKR2Q8NFJ6 384 aa20.23■□□□□ 0.83
TPM4-201ENST00000300933 OR13C2Q8NGS9 318 aa20.23■□□□□ 0.83
TPM4-201ENST00000300933 SMAP2Q8WU79 429 aaPredicted RBP20.23■□□□□ 0.83
TPM4-201ENST00000300933 ZDHHC19Q8WVZ1 309 aaPredicted RBP20.23■□□□□ 0.83
TPM4-201ENST00000300933 TMEM239Q8WW34 195 aa20.23■□□□□ 0.83
TPM4-201ENST00000300933 C1GALT1C1Q96EU7 318 aa20.23■□□□□ 0.83
TPM4-201ENST00000300933 CCDC120Q96HB5 630 aa20.23■□□□□ 0.83
TPM4-201ENST00000300933 TM9SF2Q99805 663 aa20.23■□□□□ 0.83
TPM4-201ENST00000300933 UBQLN3Q9H347 655 aa20.23■□□□□ 0.83
TPM4-201ENST00000300933 ING3Q9NXR8 418 aa20.23■□□□□ 0.83
TPM4-201ENST00000300933 DIMT1Q9UNQ2 313 aaKnown RBP20.23■□□□□ 0.83
TPM4-201ENST00000300933 ARID1BQ8NFD5 2236 aaPredicted RBP20.23■□□□□ 0.83
TPM4-201ENST00000300933 FAM240BA0A1B0GVZ2 78 aa20.22■□□□□ 0.83
TPM4-201ENST00000300933 THBS1P07996 1170 aa20.22■□□□□ 0.83
TPM4-201ENST00000300933 RNH1P13489 461 aaKnown RBP20.22■□□□□ 0.83
TPM4-201ENST00000300933 IL9P15248 144 aa20.22■□□□□ 0.83
TPM4-201ENST00000300933 RPS4Y1P22090 263 aaKnown RBP20.22■□□□□ 0.83
TPM4-201ENST00000300933 C1DQ13901 141 aaKnown RBP20.22■□□□□ 0.83
TPM4-201ENST00000300933 EIPR1Q53HC9 387 aa20.22■□□□□ 0.83
TPM4-201ENST00000300933 THSD4Q6ZMP0 1018 aa20.22■□□□□ 0.83
TPM4-201ENST00000300933 GJD3Q8N144 294 aa20.22■□□□□ 0.83
TPM4-201ENST00000300933 RCBTB1Q8NDN9 531 aa20.22■□□□□ 0.83
TPM4-201ENST00000300933 UPRTQ96BW1 309 aa20.22■□□□□ 0.83
TPM4-201ENST00000300933 GALNT9Q9HCQ5 603 aa20.22■□□□□ 0.83
TPM4-201ENST00000300933 HINT3Q9NQE9 182 aaKnown RBP20.22■□□□□ 0.83
TPM4-201ENST00000300933 PRTFDC1Q9NRG1 225 aa20.22■□□□□ 0.83
TPM4-201ENST00000300933 FBXL21Q9UKT6 434 aa20.22■□□□□ 0.83
TPM4-201ENST00000300933 LEUTXA8MZ59 168 aa20.22■□□□□ 0.83
TPM4-201ENST00000300933 MYL12AP19105 171 aa20.22■□□□□ 0.83
TPM4-201ENST00000300933 EVI2BP34910 448 aa20.22■□□□□ 0.83
TPM4-201ENST00000300933 OR1D4P47884 311 aa20.22■□□□□ 0.83
TPM4-201ENST00000300933 EXOSC6Q5RKV6 272 aaKnown RBP20.22■□□□□ 0.83
TPM4-201ENST00000300933 OR8H1Q8NGG4 311 aa20.22■□□□□ 0.83
TPM4-201ENST00000300933 OSTF1Q92882 214 aa20.22■□□□□ 0.83
TPM4-201ENST00000300933 STACQ99469 402 aa20.22■□□□□ 0.83
TPM4-201ENST00000300933 TBX5Q99593 518 aa20.22■□□□□ 0.83
TPM4-201ENST00000300933 HCAR1Q9BXC0 346 aa20.22■□□□□ 0.83
TPM4-201ENST00000300933 OR52D1Q9H346 318 aa20.22■□□□□ 0.83
TPM4-201ENST00000300933 SIDT1Q9NXL6 827 aaKnown RBP20.22■□□□□ 0.83
TPM4-201ENST00000300933 NLGN3Q9NZ94 848 aa20.22■□□□□ 0.83
TPM4-201ENST00000300933 FLRT3Q9NZU0 649 aa20.22■□□□□ 0.83
TPM4-201ENST00000300933 LRIT1Q9P2V4 623 aa20.22■□□□□ 0.83
TPM4-201ENST00000300933 CHURC1-FNTBB4DL54 471 aa20.21■□□□□ 0.83
TPM4-201ENST00000300933 LALBAP00709 142 aa20.21■□□□□ 0.83
TPM4-201ENST00000300933 SAGP10523 405 aaPredicted RBP20.21■□□□□ 0.83
TPM4-201ENST00000300933 BCKDHBP21953 392 aa20.21■□□□□ 0.83
TPM4-201ENST00000300933 ATP6V1E1P36543 226 aa20.21■□□□□ 0.83
TPM4-201ENST00000300933 STAT5AP42229 794 aa20.21■□□□□ 0.83
TPM4-201ENST00000300933 PGGHGQ32M88 737 aa20.21■□□□□ 0.83
TPM4-201ENST00000300933 PLBD1Q6P4A8 553 aa20.21■□□□□ 0.83
TPM4-201ENST00000300933 NPSR1Q6W5P4 371 aa20.21■□□□□ 0.83
TPM4-201ENST00000300933 GALNT6Q8NCL4 622 aa20.21■□□□□ 0.83
TPM4-201ENST00000300933 MEPEQ9NQ76 525 aaPredicted RBP20.21■□□□□ 0.83
TPM4-201ENST00000300933 CLDN16Q9Y5I7 305 aa20.21■□□□□ 0.83
TPM4-201ENST00000300933 UBL4AP11441 157 aa20.21■□□□□ 0.83
TPM4-201ENST00000300933 FASLGP48023 281 aa20.21■□□□□ 0.83
TPM4-201ENST00000300933 ESCO2Q56NI9 601 aa20.21■□□□□ 0.83
TPM4-201ENST00000300933 GKN2Q86XP6 184 aa20.21■□□□□ 0.83
TPM4-201ENST00000300933 GATSQ8NAP1 163 aa20.21■□□□□ 0.83
TPM4-201ENST00000300933 ART5Q96L15 291 aa20.21■□□□□ 0.83
TPM4-201ENST00000300933 HRO43593 1189 aa20.2■□□□□ 0.82
TPM4-201ENST00000300933 NKX2-2O95096 273 aa20.2■□□□□ 0.82
TPM4-201ENST00000300933 LYPD3O95274 346 aa20.2■□□□□ 0.82
TPM4-201ENST00000300933 IL1AP01583 271 aa20.2■□□□□ 0.82
TPM4-201ENST00000300933 LIMS3P0CW19 117 aa20.2■□□□□ 0.82
TPM4-201ENST00000300933 LIMS4P0CW20 117 aa20.2■□□□□ 0.82
TPM4-201ENST00000300933 OR1D5P58170 312 aa20.2■□□□□ 0.82
TPM4-201ENST00000300933 INSL4Q14641 139 aa20.2■□□□□ 0.82
TPM4-201ENST00000300933 ZNF791Q3KP31 576 aaPredicted RBP20.2■□□□□ 0.82
TPM4-201ENST00000300933 ZNF321PQ8N8H1 164 aa20.2■□□□□ 0.82
TPM4-201ENST00000300933 OR2T33Q8NG76 320 aa20.2■□□□□ 0.82
TPM4-201ENST00000300933 OR4C3Q8NH37 302 aa20.2■□□□□ 0.82
TPM4-201ENST00000300933 TCTN2Q96GX1 697 aa20.2■□□□□ 0.82
TPM4-201ENST00000300933 ANKRD19PQ9H560 264 aa20.2■□□□□ 0.82
TPM4-201ENST00000300933 KCNN3Q9UGI6 736 aa20.2■□□□□ 0.82
TPM4-201ENST00000300933 UNC119BA6NIH7 251 aa20.2■□□□□ 0.82
TPM4-201ENST00000300933 SLC9A3P48764 834 aa20.2■□□□□ 0.82
TPM4-201ENST00000300933 FNTBP49356 437 aa20.2■□□□□ 0.82
TPM4-201ENST00000300933 RPS25P62851 125 aaKnown RBP20.2■□□□□ 0.82
TPM4-201ENST00000300933 MLLT11Q13015 90 aaPredicted RBP20.2■□□□□ 0.82
TPM4-201ENST00000300933 TOR2AQ5JU69 321 aa20.2■□□□□ 0.82
TPM4-201ENST00000300933 LIX1LQ8IVB5 337 aa20.2■□□□□ 0.82
TPM4-201ENST00000300933 PRSS58Q8IYP2 241 aa20.2■□□□□ 0.82
TPM4-201ENST00000300933 OR51Q1Q8NH59 317 aa20.2■□□□□ 0.82
TPM4-201ENST00000300933 KATNB1Q9BVA0 655 aa20.2■□□□□ 0.82
TPM4-201ENST00000300933 NIPAL2Q9H841 368 aa20.2■□□□□ 0.82
TPM4-201ENST00000300933 B3GAT2Q9NPZ5 323 aa20.2■□□□□ 0.82
TPM4-201ENST00000300933 DHCR7Q9UBM7 475 aaKnown RBP20.2■□□□□ 0.82
TPM4-201ENST00000300933 ZNF223Q9UK11 482 aaPredicted RBP20.2■□□□□ 0.82
TPM4-201ENST00000300933 LRRN3E7EW58 273 aa20.2■□□□□ 0.82
TPM4-201ENST00000300933 HPGDSO60760 199 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms