RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 GATSQ8NAP1 163 aa14.24□□□□□ -0.13
LSM6-201ENST00000296581 ZNF540Q8NDQ6 660 aa14.24□□□□□ -0.13
LSM6-201ENST00000296581 PFN4Q8NHR9 129 aa14.24□□□□□ -0.13
LSM6-201ENST00000296581 TEX47Q8TBZ9 253 aa14.24□□□□□ -0.13
LSM6-201ENST00000296581 PHOSPHO1Q8TCT1 267 aa14.24□□□□□ -0.13
LSM6-201ENST00000296581 RHNO1Q9BSD3 238 aa14.24□□□□□ -0.13
LSM6-201ENST00000296581 DDA1Q9BW61 102 aa14.24□□□□□ -0.13
LSM6-201ENST00000296581 FKBP14Q9NWM8 211 aa14.24□□□□□ -0.13
LSM6-201ENST00000296581 TOR4AQ9NXH8 423 aa14.24□□□□□ -0.13
LSM6-201ENST00000296581 ERVK-18Q9QC07 812 aa14.24□□□□□ -0.13
LSM6-201ENST00000296581 PSORS1C1Q9UIG5 152 aa14.24□□□□□ -0.13
LSM6-201ENST00000296581 TMEM5Q9Y2B1 443 aa14.24□□□□□ -0.13
LSM6-201ENST00000296581 MED31Q9Y3C7 131 aa14.24□□□□□ -0.13
LSM6-201ENST00000296581 SNX5Q9Y5X3 404 aa14.24□□□□□ -0.13
LSM6-201ENST00000296581 TRBV11-1A0A0K0K1C0 115 aa14.24□□□□□ -0.13
LSM6-201ENST00000296581 SH3D21A4FU49 640 aa14.24□□□□□ -0.13
LSM6-201ENST00000296581 TMEM200CA6NKL6 621 aa14.24□□□□□ -0.13
LSM6-201ENST00000296581 CDC42EP2O14613 210 aa14.24□□□□□ -0.13
LSM6-201ENST00000296581 LRP3O75074 770 aa14.24□□□□□ -0.13
LSM6-201ENST00000296581 MTRF1O75570 445 aaKnown RBP14.24□□□□□ -0.13
LSM6-201ENST00000296581 SMSP52788 366 aa14.24□□□□□ -0.13
LSM6-201ENST00000296581 NRG3P56975 720 aa14.24□□□□□ -0.13
LSM6-201ENST00000296581 PMS2P3Q13401 168 aa14.24□□□□□ -0.13
LSM6-201ENST00000296581 PCOLCEQ15113 449 aa14.24□□□□□ -0.13
LSM6-201ENST00000296581 GPR107Q5VW38 600 aa14.24□□□□□ -0.13
LSM6-201ENST00000296581 TMPRSS11FQ6ZWK6 438 aa14.24□□□□□ -0.13
LSM6-201ENST00000296581 CADM2Q8N3J6 435 aa14.24□□□□□ -0.13
LSM6-201ENST00000296581 IQCF1Q8N6M8 205 aa14.24□□□□□ -0.13
LSM6-201ENST00000296581 MINDY2Q8NBR6 621 aa14.24□□□□□ -0.13
LSM6-201ENST00000296581 OR5L2Q8NGL0 311 aa14.24□□□□□ -0.13
LSM6-201ENST00000296581 OR8J1Q8NGP2 316 aa14.24□□□□□ -0.13
LSM6-201ENST00000296581 OR2Y1Q8NGV0 311 aa14.24□□□□□ -0.13
LSM6-201ENST00000296581 DNAJA4Q8WW22 397 aaPredicted RBP14.24□□□□□ -0.13
LSM6-201ENST00000296581 TAAR9Q96RI9 348 aa14.24□□□□□ -0.13
LSM6-201ENST00000296581 TUBA1CQ9BQE3 449 aa14.24□□□□□ -0.13
LSM6-201ENST00000296581 POLDIP3Q9BY77 421 aaKnown RBP14.24□□□□□ -0.13
LSM6-201ENST00000296581 LAT2Q9GZY6 243 aa14.24□□□□□ -0.13
LSM6-201ENST00000296581 TP63Q9H3D4 680 aaPredicted RBP14.24□□□□□ -0.13
LSM6-201ENST00000296581 PARD6AQ9NPB6 346 aa14.24□□□□□ -0.13
LSM6-201ENST00000296581 C20orf141Q9NUB4 165 aa14.24□□□□□ -0.13
LSM6-201ENST00000296581 RPS6KB2Q9UBS0 482 aa14.24□□□□□ -0.13
LSM6-201ENST00000296581 PTRH2Q9Y3E5 179 aaKnown RBP14.24□□□□□ -0.13
LSM6-201ENST00000296581 CDH10Q9Y6N8 788 aa14.24□□□□□ -0.13
LSM6-201ENST00000296581 WDR87Q6ZQQ6 2873 aa14.23□□□□□ -0.13
LSM6-201ENST00000296581 ICMTO60725 284 aa14.23□□□□□ -0.13
LSM6-201ENST00000296581 CSO75390 466 aaKnown RBP14.23□□□□□ -0.13
LSM6-201ENST00000296581 STK17BO94768 372 aa14.23□□□□□ -0.13
LSM6-201ENST00000296581 IFI30P13284 250 aa14.23□□□□□ -0.13
LSM6-201ENST00000296581 COPZ1P61923 177 aa14.23□□□□□ -0.13
LSM6-201ENST00000296581 EFNB1P98172 346 aa14.23□□□□□ -0.13
LSM6-201ENST00000296581 TCF15Q12870 199 aa14.23□□□□□ -0.13
LSM6-201ENST00000296581 ACSM5Q6NUN0 579 aa14.23□□□□□ -0.13
LSM6-201ENST00000296581 SLC27A4Q6P1M0 643 aa14.23□□□□□ -0.13
LSM6-201ENST00000296581 CBLN3Q6UW01 205 aa14.23□□□□□ -0.13
LSM6-201ENST00000296581 OSTF1Q92882 214 aa14.23□□□□□ -0.13
LSM6-201ENST00000296581 CCNL2Q96S94 520 aaPredicted RBP14.23□□□□□ -0.13
LSM6-201ENST00000296581 RTN4RQ9BZR6 473 aa14.23□□□□□ -0.13
LSM6-201ENST00000296581 MOV10Q9HCE1 1003 aaKnown RBP14.23□□□□□ -0.13
LSM6-201ENST00000296581 MEPEQ9NQ76 525 aaPredicted RBP14.23□□□□□ -0.13
LSM6-201ENST00000296581 NPFFR2Q9Y5X5 522 aa14.23□□□□□ -0.13
LSM6-201ENST00000296581 UNC119BA6NIH7 251 aa14.22□□□□□ -0.13
LSM6-201ENST00000296581 GTPBP1O00178 669 aaKnown RBP14.22□□□□□ -0.13
LSM6-201ENST00000296581 RGS10O43665 173 aa14.22□□□□□ -0.13
LSM6-201ENST00000296581 FADS1O60427 444 aa14.22□□□□□ -0.13
LSM6-201ENST00000296581 PPM1BO75688 479 aa14.22□□□□□ -0.13
LSM6-201ENST00000296581 NADKO95544 446 aaPredicted RBP14.22□□□□□ -0.13
LSM6-201ENST00000296581 DLGAP3O95886 979 aa14.22□□□□□ -0.13
LSM6-201ENST00000296581 MT-CO3P00414 261 aa14.22□□□□□ -0.13
LSM6-201ENST00000296581 MAKP20794 623 aa14.22□□□□□ -0.13
LSM6-201ENST00000296581 PTNP21246 168 aa14.22□□□□□ -0.13
LSM6-201ENST00000296581 PCMT1P22061 227 aa14.22□□□□□ -0.13
LSM6-201ENST00000296581 CLDN6P56747 220 aa14.22□□□□□ -0.13
LSM6-201ENST00000296581 NEDD8Q15843 81 aa14.22□□□□□ -0.13
LSM6-201ENST00000296581 SLC25A30Q5SVS4 291 aa14.22□□□□□ -0.13
LSM6-201ENST00000296581 FAM69BQ5VUD6 431 aa14.22□□□□□ -0.13
LSM6-201ENST00000296581 FGF11Q92914 225 aa14.22□□□□□ -0.13
LSM6-201ENST00000296581 C3orf49Q96BT1 292 aa14.22□□□□□ -0.13
LSM6-201ENST00000296581 BPIFA2Q96DR5 249 aa14.22□□□□□ -0.13
LSM6-201ENST00000296581 ZNF486Q96H40 463 aaPredicted RBP14.22□□□□□ -0.13
LSM6-201ENST00000296581 DPH1Q9BZG8 443 aa14.22□□□□□ -0.13
LSM6-201ENST00000296581 ATP13A2Q9NQ11 1180 aa14.22□□□□□ -0.13
LSM6-201ENST00000296581 CLN6Q9NWW5 311 aa14.22□□□□□ -0.13
LSM6-201ENST00000296581 PISDQ9UG56 409 aa14.22□□□□□ -0.13
LSM6-201ENST00000296581 A0A087WUJ7 227 aa14.22□□□□□ -0.13
LSM6-201ENST00000296581 PMS2P1A4D2B8 440 aa14.22□□□□□ -0.13
LSM6-201ENST00000296581 CLCA1A8K7I4 914 aa14.22□□□□□ -0.13
LSM6-201ENST00000296581 CDK2AP1O14519 115 aa14.22□□□□□ -0.13
LSM6-201ENST00000296581 EIF4E2O60573 245 aaKnown RBP14.22□□□□□ -0.13
LSM6-201ENST00000296581 ZNF354AO60765 605 aaPredicted RBP14.22□□□□□ -0.13
LSM6-201ENST00000296581 ZFAND5O76080 213 aa14.22□□□□□ -0.13
LSM6-201ENST00000296581 CD63P08962 238 aa14.22□□□□□ -0.13
LSM6-201ENST00000296581 NAGAP17050 411 aa14.22□□□□□ -0.13
LSM6-201ENST00000296581 TTKP33981 857 aa14.22□□□□□ -0.13
LSM6-201ENST00000296581 EFR3AQ14156 821 aa14.22□□□□□ -0.13
LSM6-201ENST00000296581 RAB39AQ14964 217 aa14.22□□□□□ -0.13
LSM6-201ENST00000296581 WBP2NLQ6ICG8 309 aa14.22□□□□□ -0.13
LSM6-201ENST00000296581 C16orf47Q6ZP98 133 aaPredicted RBP14.22□□□□□ -0.13
LSM6-201ENST00000296581 PRSS48Q7RTY5 328 aa14.22□□□□□ -0.13
LSM6-201ENST00000296581 PIP4P1Q86T03 277 aa14.22□□□□□ -0.13
LSM6-201ENST00000296581 CDK20Q8IZL9 346 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms