RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 CTSLP07711 333 aa16.48■□□□□ 0.23
CDC42EP3-201ENST00000295324 MYF6P23409 242 aa16.48■□□□□ 0.23
CDC42EP3-201ENST00000295324 MOGQ16653 247 aa16.48■□□□□ 0.23
CDC42EP3-201ENST00000295324 SLC16A14Q7RTX9 510 aa16.48■□□□□ 0.23
CDC42EP3-201ENST00000295324 SLC22A16Q86VW1 577 aa16.48■□□□□ 0.23
CDC42EP3-201ENST00000295324 LSM14AQ8ND56 463 aaKnown RBP16.48■□□□□ 0.23
CDC42EP3-201ENST00000295324 MS4A6EQ96DS6 147 aa16.48■□□□□ 0.23
CDC42EP3-201ENST00000295324 ELP4Q96EB1 424 aa16.48■□□□□ 0.23
CDC42EP3-201ENST00000295324 PKMYT1Q99640 499 aa16.48■□□□□ 0.23
CDC42EP3-201ENST00000295324 TEX101Q9BY14 249 aa16.48■□□□□ 0.23
CDC42EP3-201ENST00000295324 CXorf36Q9H7Y0 433 aa16.48■□□□□ 0.23
CDC42EP3-201ENST00000295324 HIF3AQ9Y2N7 669 aa16.48■□□□□ 0.23
CDC42EP3-201ENST00000295324 CORINQ9Y5Q5 1042 aa16.48■□□□□ 0.23
CDC42EP3-201ENST00000295324 UBR3Q6ZT12 1888 aa16.47■□□□□ 0.23
CDC42EP3-201ENST00000295324 PRAMEF25A6NGN4 478 aa16.47■□□□□ 0.23
CDC42EP3-201ENST00000295324 IDSB3KWA1 339 aa16.47■□□□□ 0.23
CDC42EP3-201ENST00000295324 KIAA0513O60268 411 aa16.47■□□□□ 0.23
CDC42EP3-201ENST00000295324 CEACAM5P06731 702 aa16.47■□□□□ 0.23
CDC42EP3-201ENST00000295324 KCNAB1Q14722 419 aa16.47■□□□□ 0.23
CDC42EP3-201ENST00000295324 FAM109BQ6ICB4 259 aaPredicted RBP16.47■□□□□ 0.23
CDC42EP3-201ENST00000295324 ETFBKMTQ8IXQ9 262 aa16.47■□□□□ 0.23
CDC42EP3-201ENST00000295324 ZPBPQ9BS86 351 aa16.47■□□□□ 0.23
CDC42EP3-201ENST00000295324 AGPAT4Q9NRZ5 378 aa16.47■□□□□ 0.23
CDC42EP3-201ENST00000295324 NUDT15Q9NV35 164 aa16.47■□□□□ 0.23
CDC42EP3-201ENST00000295324 NOSIPQ9Y314 301 aaKnown RBP16.47■□□□□ 0.23
CDC42EP3-201ENST00000295324 SLC22A7Q9Y694 548 aa16.47■□□□□ 0.23
CDC42EP3-201ENST00000295324 CHRM4P08173 479 aa16.47■□□□□ 0.23
CDC42EP3-201ENST00000295324 HOXC8P31273 242 aa16.47■□□□□ 0.23
CDC42EP3-201ENST00000295324 EPHA5P54756 1037 aa16.47■□□□□ 0.23
CDC42EP3-201ENST00000295324 HLA-BQ31612 363 aa16.47■□□□□ 0.23
CDC42EP3-201ENST00000295324 TP53I3Q53FA7 332 aa16.47■□□□□ 0.23
CDC42EP3-201ENST00000295324 FAM71E1Q6IPT2 247 aa16.47■□□□□ 0.23
CDC42EP3-201ENST00000295324 CYP4V2Q6ZWL3 525 aaPredicted RBP16.47■□□□□ 0.23
CDC42EP3-201ENST00000295324 CCL4L1Q8NHW4 92 aa16.47■□□□□ 0.23
CDC42EP3-201ENST00000295324 NARSO43776 548 aaKnown RBP16.47■□□□□ 0.23
CDC42EP3-201ENST00000295324 PEX14O75381 377 aa16.47■□□□□ 0.23
CDC42EP3-201ENST00000295324 ST6GAL1P15907 406 aa16.47■□□□□ 0.23
CDC42EP3-201ENST00000295324 GPR3P46089 330 aa16.47■□□□□ 0.23
CDC42EP3-201ENST00000295324 DNASE1L3Q13609 305 aa16.47■□□□□ 0.23
CDC42EP3-201ENST00000295324 MFSD12Q6NUT3 480 aa16.47■□□□□ 0.23
CDC42EP3-201ENST00000295324 CMIPQ8IY22 773 aa16.47■□□□□ 0.23
CDC42EP3-201ENST00000295324 OR2T11Q8NH01 316 aa16.47■□□□□ 0.23
CDC42EP3-201ENST00000295324 ZNF417Q8TAU3 575 aa16.47■□□□□ 0.23
CDC42EP3-201ENST00000295324 ZNF707Q96C28 371 aaPredicted RBP16.47■□□□□ 0.23
CDC42EP3-201ENST00000295324 ADAMTS7Q9UKP4 1686 aa16.47■□□□□ 0.23
CDC42EP3-201ENST00000295324 ALG5Q9Y673 324 aa16.47■□□□□ 0.23
CDC42EP3-201ENST00000295324 TVP23AA6NH52 213 aa16.47■□□□□ 0.23
CDC42EP3-201ENST00000295324 PLPP1O14494 284 aa16.47■□□□□ 0.23
CDC42EP3-201ENST00000295324 CARD18P57730 90 aa16.47■□□□□ 0.23
CDC42EP3-201ENST00000295324 PGGHGQ32M88 737 aa16.47■□□□□ 0.23
CDC42EP3-201ENST00000295324 SLC6A19Q695T7 634 aa16.47■□□□□ 0.23
CDC42EP3-201ENST00000295324 DCDC5Q6ZRR9 648 aa16.47■□□□□ 0.23
CDC42EP3-201ENST00000295324 GCDHQ92947 438 aaPredicted RBP16.47■□□□□ 0.23
CDC42EP3-201ENST00000295324 ZNF566Q969W8 418 aa16.47■□□□□ 0.23
CDC42EP3-201ENST00000295324 OR51B6Q9H340 312 aa16.47■□□□□ 0.23
CDC42EP3-201ENST00000295324 SCGB2A1O75556 95 aa16.46■□□□□ 0.23
CDC42EP3-201ENST00000295324 ACTL6BO94805 426 aa16.46■□□□□ 0.23
CDC42EP3-201ENST00000295324 CDNFQ49AH0 187 aa16.46■□□□□ 0.23
CDC42EP3-201ENST00000295324 TMEM71Q6P5X7 295 aa16.46■□□□□ 0.23
CDC42EP3-201ENST00000295324 PGM2L1Q6PCE3 622 aa16.46■□□□□ 0.23
CDC42EP3-201ENST00000295324 GSKIPQ9P0R6 139 aa16.46■□□□□ 0.23
CDC42EP3-201ENST00000295324 ABRACLQ9P1F3 81 aa16.46■□□□□ 0.23
CDC42EP3-201ENST00000295324 ABCA3Q99758 1704 aa16.46■□□□□ 0.23
CDC42EP3-201ENST00000295324 TNFSF15O95150 251 aa16.46■□□□□ 0.23
CDC42EP3-201ENST00000295324 NUDT7P0C024 238 aa16.46■□□□□ 0.23
CDC42EP3-201ENST00000295324 ZFP90Q8TF47 636 aa16.46■□□□□ 0.23
CDC42EP3-201ENST00000295324 OR52A5Q9H2C5 316 aa16.46■□□□□ 0.23
CDC42EP3-201ENST00000295324 FAM53CQ9NYF3 392 aa16.46■□□□□ 0.23
CDC42EP3-201ENST00000295324 COPZ2Q9P299 210 aa16.46■□□□□ 0.23
CDC42EP3-201ENST00000295324 TMED7-TICAM2A0A0A6YYA0 188 aa16.46■□□□□ 0.23
CDC42EP3-201ENST00000295324 ISPDA4D126 451 aa16.46■□□□□ 0.23
CDC42EP3-201ENST00000295324 SYT5O00445 386 aa16.46■□□□□ 0.23
CDC42EP3-201ENST00000295324 DENRO43583 198 aaKnown RBP16.46■□□□□ 0.23
CDC42EP3-201ENST00000295324 FZD6O60353 706 aa16.46■□□□□ 0.23
CDC42EP3-201ENST00000295324 PRKRAO75569 313 aaKnown RBP16.46■□□□□ 0.23
CDC42EP3-201ENST00000295324 ENPP1P22413 925 aa16.46■□□□□ 0.23
CDC42EP3-201ENST00000295324 TMED7Q9Y3B3 224 aa16.46■□□□□ 0.23
CDC42EP3-201ENST00000295324 A0A1B0GVC2 190 aa16.46■□□□□ 0.23
CDC42EP3-201ENST00000295324 H0YIG0 161 aa16.46■□□□□ 0.23
CDC42EP3-201ENST00000295324 CNN3Q15417 329 aaKnown RBP16.46■□□□□ 0.23
CDC42EP3-201ENST00000295324 UGT2A3Q6UWM9 527 aa16.46■□□□□ 0.23
CDC42EP3-201ENST00000295324 STT3BQ8TCJ2 826 aa16.46■□□□□ 0.23
CDC42EP3-201ENST00000295324 TRAV36DV7A0A075B6V5 113 aa16.46■□□□□ 0.22
CDC42EP3-201ENST00000295324 MRPS14O60783 128 aaKnown RBP16.46■□□□□ 0.22
CDC42EP3-201ENST00000295324 RAB3AP20336 220 aa16.46■□□□□ 0.22
CDC42EP3-201ENST00000295324 RAB40BQ12829 278 aa16.46■□□□□ 0.22
CDC42EP3-201ENST00000295324 ASTLQ6HA08 431 aaPredicted RBP16.46■□□□□ 0.22
CDC42EP3-201ENST00000295324 ASB12Q8WXK4 309 aa16.46■□□□□ 0.22
CDC42EP3-201ENST00000295324 NUDT22Q9BRQ3 303 aa16.46■□□□□ 0.22
CDC42EP3-201ENST00000295324 COQ3Q9NZJ6 369 aa16.46■□□□□ 0.22
CDC42EP3-201ENST00000295324 KLHL13Q9P2N7 655 aa16.46■□□□□ 0.22
CDC42EP3-201ENST00000295324 OR6C70A6NIJ9 312 aa16.45■□□□□ 0.22
CDC42EP3-201ENST00000295324 TSPAN31Q12999 210 aa16.45■□□□□ 0.22
CDC42EP3-201ENST00000295324 C9orf135Q5VTT2 229 aa16.45■□□□□ 0.22
CDC42EP3-201ENST00000295324 FRMPD2BQ6IN97 320 aa16.45■□□□□ 0.22
CDC42EP3-201ENST00000295324 FBXO27Q8NI29 283 aa16.45■□□□□ 0.22
CDC42EP3-201ENST00000295324 LINC00615Q96LM1 132 aaPredicted RBP16.45■□□□□ 0.22
CDC42EP3-201ENST00000295324 ARGFXA6NJG6 315 aa16.45■□□□□ 0.22
CDC42EP3-201ENST00000295324 OLFM2O95897 454 aa16.45■□□□□ 0.22
CDC42EP3-201ENST00000295324 PRKAR1BP31321 381 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms