RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 POU3F1Q03052 451 aaPredicted RBP11.68□□□□□ -0.54
SLX4-201ENST00000294008 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.68□□□□□ -0.54
SLX4-201ENST00000294008 MMP21Q8N119 569 aa11.68□□□□□ -0.54
SLX4-201ENST00000294008 HOXD1Q9GZZ0 328 aa11.68□□□□□ -0.54
SLX4-201ENST00000294008 RNF186Q9NXI6 227 aa11.68□□□□□ -0.54
SLX4-201ENST00000294008 PTTG3PQ9NZH4 202 aa11.68□□□□□ -0.54
SLX4-201ENST00000294008 CNIH4Q9P003 139 aa11.68□□□□□ -0.54
SLX4-201ENST00000294008 OR52A4PA6NMU1 304 aa11.68□□□□□ -0.54
SLX4-201ENST00000294008 ZNF785A8K8V0 405 aa11.68□□□□□ -0.54
SLX4-201ENST00000294008 MTCP1P56278 107 aa11.68□□□□□ -0.54
SLX4-201ENST00000294008 DEFB109BQ30KR1 87 aa11.68□□□□□ -0.54
SLX4-201ENST00000294008 ADPRMQ3LIE5 342 aa11.68□□□□□ -0.54
SLX4-201ENST00000294008 MAMSTRQ6ZN01 415 aa11.68□□□□□ -0.54
SLX4-201ENST00000294008 OR6F1Q8NGZ6 308 aa11.68□□□□□ -0.54
SLX4-201ENST00000294008 TFAP2CQ92754 450 aa11.68□□□□□ -0.54
SLX4-201ENST00000294008 MINDY3Q9H8M7 445 aa11.68□□□□□ -0.54
SLX4-201ENST00000294008 ZFP57Q9NU63 452 aa11.68□□□□□ -0.54
SLX4-201ENST00000294008 A6NIN4 97 aa11.67□□□□□ -0.54
SLX4-201ENST00000294008 KLRC4-KLRK1H3BQV0 150 aa11.67□□□□□ -0.54
SLX4-201ENST00000294008 MAGEB4O15481 346 aaPredicted RBP11.67□□□□□ -0.54
SLX4-201ENST00000294008 RGRP47804 291 aa11.67□□□□□ -0.54
SLX4-201ENST00000294008 EXOSC7Q15024 291 aaKnown RBP11.67□□□□□ -0.54
SLX4-201ENST00000294008 FAM198BQ6UWH4 519 aa11.67□□□□□ -0.54
SLX4-201ENST00000294008 DCAF4L2Q8NA75 395 aa11.67□□□□□ -0.54
SLX4-201ENST00000294008 OR52R1Q8NGF1 315 aa11.67□□□□□ -0.54
SLX4-201ENST00000294008 FER1L6-AS2Q96M78 137 aa11.67□□□□□ -0.54
SLX4-201ENST00000294008 NDFIP1Q9BT67 221 aa11.67□□□□□ -0.54
SLX4-201ENST00000294008 PURGQ9UJV8 347 aaKnown RBP11.67□□□□□ -0.54
SLX4-201ENST00000294008 ABCA8O94911 1581 aa11.67□□□□□ -0.54
SLX4-201ENST00000294008 RNASE1P07998 156 aaKnown RBP11.67□□□□□ -0.54
SLX4-201ENST00000294008 ZNF74Q16587 644 aa11.67□□□□□ -0.54
SLX4-201ENST00000294008 TEX26Q8N6G2 289 aa11.67□□□□□ -0.54
SLX4-201ENST00000294008 IGSF9Q9P2J2 1179 aa11.67□□□□□ -0.54
SLX4-201ENST00000294008 ZNF230Q9UIE0 474 aaPredicted RBP11.67□□□□□ -0.54
SLX4-201ENST00000294008 SLC6A5Q9Y345 797 aa11.67□□□□□ -0.54
SLX4-201ENST00000294008 TFP02787 698 aa11.67□□□□□ -0.54
SLX4-201ENST00000294008 M6PRP20645 277 aa11.67□□□□□ -0.54
SLX4-201ENST00000294008 MAT1AQ00266 395 aaKnown RBP11.67□□□□□ -0.54
SLX4-201ENST00000294008 OR2B11Q5JQS5 317 aa11.67□□□□□ -0.54
SLX4-201ENST00000294008 NCBP2-AS2Q69YL0 99 aa11.67□□□□□ -0.54
SLX4-201ENST00000294008 MINDY1Q8N5J2 469 aa11.67□□□□□ -0.54
SLX4-201ENST00000294008 LRRC57Q8N9N7 239 aa11.67□□□□□ -0.54
SLX4-201ENST00000294008 OR1J2Q8NGS2 313 aa11.67□□□□□ -0.54
SLX4-201ENST00000294008 L2HGDHQ9H9P8 463 aa11.67□□□□□ -0.54
SLX4-201ENST00000294008 SLC16A7O60669 478 aa11.67□□□□□ -0.54
SLX4-201ENST00000294008 ABHD16AO95870 558 aa11.67□□□□□ -0.54
SLX4-201ENST00000294008 IL4RP24394 825 aa11.67□□□□□ -0.54
SLX4-201ENST00000294008 AAED1Q7RTV5 226 aa11.67□□□□□ -0.54
SLX4-201ENST00000294008 MISPQ8IVT2 679 aa11.67□□□□□ -0.54
SLX4-201ENST00000294008 OR5M1Q8NGP8 315 aa11.67□□□□□ -0.54
SLX4-201ENST00000294008 RSRP1Q9BUV0 290 aa11.67□□□□□ -0.54
SLX4-201ENST00000294008 OR11A1Q9GZK7 315 aa11.67□□□□□ -0.54
SLX4-201ENST00000294008 SLCO3A1Q9UIG8 710 aa11.67□□□□□ -0.54
SLX4-201ENST00000294008 SHROOM2Q13796 1616 aa11.67□□□□□ -0.54
SLX4-201ENST00000294008 BCORL1Q5H9F3 1711 aa11.67□□□□□ -0.54
SLX4-201ENST00000294008 TCRBV7S3A2A0A539 114 aa11.67□□□□□ -0.54
SLX4-201ENST00000294008 TRAPPC2P0DI81 140 aa11.67□□□□□ -0.54
SLX4-201ENST00000294008 TRAPPC2BP0DI82 140 aa11.67□□□□□ -0.54
SLX4-201ENST00000294008 ARSAP15289 507 aa11.67□□□□□ -0.54
SLX4-201ENST00000294008 NTF3P20783 257 aa11.67□□□□□ -0.54
SLX4-201ENST00000294008 ELAVL4P26378 380 aaKnown RBP11.67□□□□□ -0.54
SLX4-201ENST00000294008 GPLD1P80108 840 aa11.67□□□□□ -0.54
SLX4-201ENST00000294008 DOC2BQ14184 412 aa11.67□□□□□ -0.54
SLX4-201ENST00000294008 ZNF169Q14929 603 aaPredicted RBP11.67□□□□□ -0.54
SLX4-201ENST00000294008 TMEM31Q5JXX7 168 aa11.67□□□□□ -0.54
SLX4-201ENST00000294008 M1APQ8TC57 530 aa11.67□□□□□ -0.54
SLX4-201ENST00000294008 ADAMTS18Q8TE60 1221 aa11.67□□□□□ -0.54
SLX4-201ENST00000294008 IKZF5Q9H5V7 419 aa11.67□□□□□ -0.54
SLX4-201ENST00000294008 ABCD4O14678 606 aa11.67□□□□□ -0.54
SLX4-201ENST00000294008 TGFB1I1O43294 461 aa11.67□□□□□ -0.54
SLX4-201ENST00000294008 GATCO43716 136 aaKnown RBP11.67□□□□□ -0.54
SLX4-201ENST00000294008 UBCP0CG48 685 aaKnown RBP11.67□□□□□ -0.54
SLX4-201ENST00000294008 TUBA1BP68363 451 aa11.67□□□□□ -0.54
SLX4-201ENST00000294008 TUBA1AQ71U36 451 aa11.67□□□□□ -0.54
SLX4-201ENST00000294008 DOK3Q7L591 496 aa11.67□□□□□ -0.54
SLX4-201ENST00000294008 CPEB2Q7Z5Q1 589 aaKnown RBP11.67□□□□□ -0.54
SLX4-201ENST00000294008 OR5B3Q8NH48 314 aa11.67□□□□□ -0.54
SLX4-201ENST00000294008 SLC38A5Q8WUX1 472 aa11.67□□□□□ -0.54
SLX4-201ENST00000294008 EGLN3Q9H6Z9 239 aa11.67□□□□□ -0.54
SLX4-201ENST00000294008 INIPQ9NRY2 104 aa11.67□□□□□ -0.54
SLX4-201ENST00000294008 AHSGP02765 367 aa11.66□□□□□ -0.54
SLX4-201ENST00000294008 TIA1P31483 386 aaKnown RBP eCLIP11.66□□□□□ -0.54
SLX4-201ENST00000294008 ELLP55199 621 aaPredicted RBP11.66□□□□□ -0.54
SLX4-201ENST00000294008 PPP1R3AQ16821 1122 aa11.66□□□□□ -0.54
SLX4-201ENST00000294008 TBC1D28Q2M2D7 210 aa11.66□□□□□ -0.54
SLX4-201ENST00000294008 UBE2NLQ5JXB2 153 aa11.66□□□□□ -0.54
SLX4-201ENST00000294008 ZNF425Q6IV72 752 aa11.66□□□□□ -0.54
SLX4-201ENST00000294008 ACBD7Q8N6N7 88 aa11.66□□□□□ -0.54
SLX4-201ENST00000294008 CNTNAP3Q9BZ76 1288 aa11.66□□□□□ -0.54
SLX4-201ENST00000294008 CPNE7Q9UBL6 633 aa11.66□□□□□ -0.54
SLX4-201ENST00000294008 AUP1Q9Y679 476 aa11.66□□□□□ -0.54
SLX4-201ENST00000294008 ARPC4-TTLL3A0A0A6YYG9 625 aa11.66□□□□□ -0.54
SLX4-201ENST00000294008 A0A0D9SG52 128 aa11.66□□□□□ -0.54
SLX4-201ENST00000294008 ZCWPW2A0A1B0GU75 182 aa11.66□□□□□ -0.54
SLX4-201ENST00000294008 FRS3O43559 492 aa11.66□□□□□ -0.54
SLX4-201ENST00000294008 FUT1P19526 365 aa11.66□□□□□ -0.54
SLX4-201ENST00000294008 MFSD5Q6N075 450 aa11.66□□□□□ -0.54
SLX4-201ENST00000294008 CYP4V2Q6ZWL3 525 aaPredicted RBP11.66□□□□□ -0.54
SLX4-201ENST00000294008 CPXM2Q8N436 756 aa11.66□□□□□ -0.54
SLX4-201ENST00000294008 DNAJC19Q96DA6 116 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms