RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 NTNG2Q96CW9 530 aa7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 SLC47A1Q96FL8 570 aa7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 SCNM1Q9BWG6 230 aa7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 TTTY10Q9BZA0 68 aa7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 ZNF160Q9HCG1 818 aa7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 S100A14Q9HCY8 104 aa7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 MYOTQ9UBF9 498 aa7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 ENOPH1Q9UHY7 261 aa7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 YARS2Q9Y2Z4 477 aaKnown RBP7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 WDR45Q9Y484 360 aa7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 TLN1Q9Y490 2541 aaKnown RBP7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 IGHV3-20A0A0C4DH32 117 aa7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 SCRN3Q0VDG4 424 aa7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 COX10Q12887 443 aa7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 NPRL3Q12980 569 aa7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 NTRK2Q16620 822 aa7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 C9orf135Q5VTT2 229 aa7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 LYPD8Q6UX82 237 aa7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 IZUMO2Q6UXV1 221 aa7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 LIX1LQ8IVB5 337 aa7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 PRR22Q8IZ63 422 aa7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 ADGRG5Q8IZF4 528 aa7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 APOBEC4Q8WW27 367 aaKnown RBP7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 ASB15Q8WXK1 588 aa7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 HGDQ93099 445 aa7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 TSPAN10Q9H1Z9 355 aaPredicted RBP7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 GMPR2Q9P2T1 348 aaKnown RBP7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 ERGIC3Q9Y282 383 aa7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 SLC35A3Q9Y2D2 325 aa7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 GXYLT2A0PJZ3 443 aa7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 FAM25EA8MYX2 175 aa7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 TFECO14948 347 aaPredicted RBP7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 FMO6PO60774 539 aa7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 FARS2O95363 451 aaKnown RBP7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 GP1BBP13224 206 aa7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 NCK1P16333 377 aa7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 CRYBA2P53672 197 aa7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 EEF1A1P68104 462 aaKnown RBP7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 DCAF10Q5QP82 559 aa7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 PDZK1Q5T2W1 519 aa7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 FAM71CQ8NEG0 241 aa7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 TM9SF4Q92544 642 aa7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 SFXN2Q96NB2 322 aa7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 NUAK2Q9H093 628 aa7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 RNF32Q9H0A6 362 aa7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 NXF5Q9H1B4 397 aaKnown RBP7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 WDFY4Q6ZS81 3184 aa7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 CROCCQ5TZA2 2017 aa7.74□□□□□ -1.17
PTPDC1-201ENST00000288976 TMEM8BA6NDV4 472 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 H3BML4 177 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 KLK10O43240 276 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 IGKV1D-16P01601 117 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 DCTP40126 519 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 SLC9A3P48764 834 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 CDC20Q12834 499 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 ATP1A4Q13733 1029 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 FLYWCH1Q4VC44 716 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 IFI44LQ53G44 452 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 TRIQKQ629K1 86 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 OPN5Q6U736 354 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 ZSCAN4Q8NAM6 433 aaPredicted RBP7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 OR10H4Q8NGA5 316 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 GATA6Q92908 595 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 TMCO6Q96DC7 493 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 HSH2DQ96JZ2 352 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 ZNF347Q96SE7 839 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 LHPPQ9H008 270 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 ATP13A2Q9NQ11 1180 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 KIF26BQ2KJY2 2108 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 CDC14CA4D256 554 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 TMEM229AB2RXF0 380 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 FAAHO00519 579 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 ZIC2O95409 532 aaPredicted RBP7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 ABCD3P28288 659 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 KCNJ10P78508 379 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 GALK2Q01415 458 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 Q0VFX4 171 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 MEP1AQ16819 746 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 RPS26P11Q5JNZ5 115 aaPredicted RBP7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 DCST1Q5T197 706 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 FNDC7Q5VTL7 733 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 ZNF540Q8NDQ6 660 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 OMA1Q96E52 524 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 DCLRE1BQ9H816 532 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 UBQLN4Q9NRR5 601 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 STMN3Q9NZ72 180 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 PPP4R1LQ9P1A2 415 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 VDAC3Q9Y277 283 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 GSTK1Q9Y2Q3 226 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 MRPS18BQ9Y676 258 aaKnown RBP7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 EFCAB10A6NFE3 127 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 PRKNO60260 465 aaPredicted RBP7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 CAPNS1P04632 268 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 ANPEPP15144 967 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 HOXD11P31277 338 aaPredicted RBP7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 CBX5P45973 191 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 PCYT1AP49585 367 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 CDH15P55291 814 aa7.73□□□□□ -1.17
PTPDC1-201ENST00000288976 SNU13P55769 128 aaKnown RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms