RNA–Protein interactions for RNA: ENST00000277537.10

SEC16A-201, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 3,910 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-201ENST00000277537 A6NCN8 305 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 TVP23AA6NH52 213 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 LILRA5A6NI73 299 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 BRINP1O60477 761 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 CBX7O95931 251 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 ETV5P41161 510 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 AQP2P41181 271 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 FASLGP48023 281 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 ETV1P50549 477 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 RPL13AP3Q6NVV1 102 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 ARHGAP11AQ6P4F7 1023 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 PLEKHG7Q6ZR37 379 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 COMTD1Q86VU5 262 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 TOR1AIP2Q8NFQ8 470 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 OR4K17Q8NGC6 315 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 OR1L3Q8NH93 324 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 SLC2A12Q8TD20 617 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 ZNF566Q969W8 418 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 ANKRD9Q96BM1 317 aaPredicted RBP8.3□□□□□ -1.08
SEC16A-201ENST00000277537 C10orf90Q96M02 699 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 COQ7Q99807 217 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 KATNB1Q9BVA0 655 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 ZNF350Q9GZX5 532 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 PILRAQ9UKJ1 303 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 SRPK3Q9UPE1 567 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 ADAM18Q9Y3Q7 739 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 CORINQ9Y5Q5 1042 aa8.3□□□□□ -1.08
SEC16A-201ENST00000277537 COL4A4P53420 1690 aaPredicted RBP8.3□□□□□ -1.08
SEC16A-201ENST00000277537 MDC1Q14676 2089 aaKnown RBP8.29□□□□□ -1.08
SEC16A-201ENST00000277537 THBS1P07996 1170 aa8.29□□□□□ -1.08
SEC16A-201ENST00000277537 PGCP20142 388 aa8.29□□□□□ -1.08
SEC16A-201ENST00000277537 TACR3P29371 465 aa8.29□□□□□ -1.08
SEC16A-201ENST00000277537 GPLD1P80108 840 aa8.29□□□□□ -1.08
SEC16A-201ENST00000277537 FOXK2Q01167 660 aa8.29□□□□□ -1.08
SEC16A-201ENST00000277537 HLA-BQ31612 363 aa8.29□□□□□ -1.08
SEC16A-201ENST00000277537 ALG10Q5BKT4 473 aa8.29□□□□□ -1.08
SEC16A-201ENST00000277537 ZNF620Q6ZNG0 422 aa8.29□□□□□ -1.08
SEC16A-201ENST00000277537 C16orf47Q6ZP98 133 aaPredicted RBP8.29□□□□□ -1.08
SEC16A-201ENST00000277537 CEACAM19Q7Z692 300 aa8.29□□□□□ -1.08
SEC16A-201ENST00000277537 LRRC17Q8N6Y2 441 aa8.29□□□□□ -1.08
SEC16A-201ENST00000277537 ZNF676Q8N7Q3 588 aa8.29□□□□□ -1.08
SEC16A-201ENST00000277537 STT3BQ8TCJ2 826 aa8.29□□□□□ -1.08
SEC16A-201ENST00000277537 NMNAT3Q96T66 252 aa8.29□□□□□ -1.08
SEC16A-201ENST00000277537 SEC61A2Q9H9S3 476 aa8.29□□□□□ -1.08
SEC16A-201ENST00000277537 DTX4Q9Y2E6 619 aa8.29□□□□□ -1.08
SEC16A-201ENST00000277537 PI4KAP42356 2102 aa8.29□□□□□ -1.08
SEC16A-201ENST00000277537 TRBV11-1A0A0K0K1C0 115 aa8.29□□□□□ -1.08
SEC16A-201ENST00000277537 EFCAB7A8K855 629 aa8.29□□□□□ -1.08
SEC16A-201ENST00000277537 EIF1AYO14602 144 aaKnown RBP8.29□□□□□ -1.08
SEC16A-201ENST00000277537 MAGEB4O15481 346 aaPredicted RBP8.29□□□□□ -1.08
SEC16A-201ENST00000277537 MRPS14O60783 128 aaKnown RBP8.29□□□□□ -1.08
SEC16A-201ENST00000277537 SLITRK5O94991 958 aa8.29□□□□□ -1.08
SEC16A-201ENST00000277537 JMJD7P0C870 316 aa8.29□□□□□ -1.08
SEC16A-201ENST00000277537 PSMB10P40306 273 aa8.29□□□□□ -1.08
SEC16A-201ENST00000277537 DMWDQ09019 674 aa8.29□□□□□ -1.08
SEC16A-201ENST00000277537 LANCL3Q6ZV70 420 aa8.29□□□□□ -1.08
SEC16A-201ENST00000277537 SLC37A3Q8NCC5 494 aa8.29□□□□□ -1.08
SEC16A-201ENST00000277537 OR10H5Q8NGA6 315 aa8.29□□□□□ -1.08
SEC16A-201ENST00000277537 MAFAQ8NHW3 353 aaPredicted RBP8.29□□□□□ -1.08
SEC16A-201ENST00000277537 TSEN15Q8WW01 171 aaKnown RBP8.29□□□□□ -1.08
SEC16A-201ENST00000277537 HOXD1Q9GZZ0 328 aa8.29□□□□□ -1.08
SEC16A-201ENST00000277537 SLC35A3Q9Y2D2 325 aa8.29□□□□□ -1.08
SEC16A-201ENST00000277537 CAB39Q9Y376 341 aaPredicted RBP8.29□□□□□ -1.08
SEC16A-201ENST00000277537 PCDHGB7Q9Y5F8 929 aa8.29□□□□□ -1.08
SEC16A-201ENST00000277537 LTBP2Q14767 1821 aa8.29□□□□□ -1.08
SEC16A-201ENST00000277537 SNRNP200O75643 2136 aaKnown RBP8.29□□□□□ -1.08
SEC16A-201ENST00000277537 A0A1B0GVC2 190 aa8.29□□□□□ -1.08
SEC16A-201ENST00000277537 A6NIN4 97 aa8.29□□□□□ -1.08
SEC16A-201ENST00000277537 SAGE2PA6NJ88 616 aa8.29□□□□□ -1.08
SEC16A-201ENST00000277537 CDC42EP2O14613 210 aa8.29□□□□□ -1.08
SEC16A-201ENST00000277537 SIGLEC6O43699 453 aa8.29□□□□□ -1.08
SEC16A-201ENST00000277537 PDGFBP01127 241 aaPredicted RBP8.29□□□□□ -1.08
SEC16A-201ENST00000277537 PRKCAP17252 672 aa8.29□□□□□ -1.08
SEC16A-201ENST00000277537 MAKP20794 623 aa8.29□□□□□ -1.08
SEC16A-201ENST00000277537 HOXD12P35452 270 aa8.29□□□□□ -1.08
SEC16A-201ENST00000277537 FRKP42685 505 aaPredicted RBP8.29□□□□□ -1.08
SEC16A-201ENST00000277537 SLC1A3P43003 542 aa8.29□□□□□ -1.08
SEC16A-201ENST00000277537 SLC15A1P46059 708 aa8.29□□□□□ -1.08
SEC16A-201ENST00000277537 HCCSP53701 268 aa8.29□□□□□ -1.08
SEC16A-201ENST00000277537 SNRPGP62308 76 aaKnown RBP8.29□□□□□ -1.08
SEC16A-201ENST00000277537 CTF1Q16619 201 aa8.29□□□□□ -1.08
SEC16A-201ENST00000277537 NKAIN1Q4KMZ8 207 aa8.29□□□□□ -1.08
SEC16A-201ENST00000277537 OTPQ5XKR4 325 aa8.29□□□□□ -1.08
SEC16A-201ENST00000277537 PAPD4Q6PIY7 484 aaKnown RBP8.29□□□□□ -1.08
SEC16A-201ENST00000277537 KIRREL2Q6UWL6 708 aa8.29□□□□□ -1.08
SEC16A-201ENST00000277537 KDM8Q8N371 416 aa8.29□□□□□ -1.08
SEC16A-201ENST00000277537 SYT14Q8NB59 555 aa8.29□□□□□ -1.08
SEC16A-201ENST00000277537 TM4SF19Q96DZ7 209 aa8.29□□□□□ -1.08
SEC16A-201ENST00000277537 CHRDQ9H2X0 955 aa8.29□□□□□ -1.08
SEC16A-201ENST00000277537 PPP4R1LQ9P1A2 415 aa8.29□□□□□ -1.08
SEC16A-201ENST00000277537 C19orf25Q9UFG5 118 aaPredicted RBP8.29□□□□□ -1.08
SEC16A-201ENST00000277537 PTRH2Q9Y3E5 179 aaKnown RBP8.29□□□□□ -1.08
SEC16A-201ENST00000277537 CHD9Q3L8U1 2897 aa8.28□□□□□ -1.08
SEC16A-201ENST00000277537 IDSB3KWA1 339 aa8.28□□□□□ -1.08
SEC16A-201ENST00000277537 FOXS1O43638 330 aa8.28□□□□□ -1.08
SEC16A-201ENST00000277537 FMO6PO60774 539 aa8.28□□□□□ -1.08
SEC16A-201ENST00000277537 SEMG1P04279 462 aa8.28□□□□□ -1.08
SEC16A-201ENST00000277537 FCER2P06734 321 aa8.28□□□□□ -1.08
SEC16A-201ENST00000277537 CLUP10909 449 aa8.28□□□□□ -1.08
SEC16A-201ENST00000277537 RAB25P57735 213 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms