RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.44□□□□□ -1.06
MSH4-201ENST00000263187 MRGPREQ86SM8 312 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 METTL27Q8N6F8 245 aaPredicted RBP8.44□□□□□ -1.06
MSH4-201ENST00000263187 KIAA1143Q96AT1 154 aaPredicted RBP8.44□□□□□ -1.06
MSH4-201ENST00000263187 MAP6Q96JE9 813 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 C10orf90Q96M02 699 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 COQ7Q99807 217 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 C1QTNF6Q9BXI9 259 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 SPRTNQ9H040 489 aaPredicted RBP8.44□□□□□ -1.06
MSH4-201ENST00000263187 CYSLTR2Q9NS75 346 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 EVA1BQ9NVM1 165 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 BRWD1Q9NSI6 2320 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 RIIAD1A6NNX1 92 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 SGK494L7N484 410 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 SLC19A2O60779 497 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 RNGTTO60942 597 aaKnown RBP8.44□□□□□ -1.06
MSH4-201ENST00000263187 NGFRP08138 427 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 RPL4P36578 427 aaKnown RBP8.44□□□□□ -1.06
MSH4-201ENST00000263187 EMDP50402 254 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 ZNF81P51508 661 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 RGS1Q08116 209 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 SMUG1Q53HV7 270 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 LINGO2Q7L985 606 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 CDK20Q8IZL9 346 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 C9orf62Q8N4C0 152 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 MFSD9Q8NBP5 474 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 OR8K3Q8NH51 312 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 ZPLD1Q8TCW7 415 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 THAP4Q8WY91 577 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 GAL3ST1Q99999 423 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 GON7Q9BXV9 100 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 NT5DC2Q9H857 520 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 CALML5Q9NZT1 146 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 KCMF1Q9P0J7 381 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 EIF3KQ9UBQ5 218 aaKnown RBP8.44□□□□□ -1.06
MSH4-201ENST00000263187 LINC01553A4QN01 128 aa8.43□□□□□ -1.06
MSH4-201ENST00000263187 DUXAA6NLW8 204 aa8.43□□□□□ -1.06
MSH4-201ENST00000263187 GATBO75879 557 aaKnown RBP8.43□□□□□ -1.06
MSH4-201ENST00000263187 CRYZL1O95825 349 aa8.43□□□□□ -1.06
MSH4-201ENST00000263187 TCRBP04435 133 aa8.43□□□□□ -1.06
MSH4-201ENST00000263187 WNT1P04628 370 aa8.43□□□□□ -1.06
MSH4-201ENST00000263187 SBK2P0C263 348 aa8.43□□□□□ -1.06
MSH4-201ENST00000263187 TYRP1P17643 537 aa8.43□□□□□ -1.06
MSH4-201ENST00000263187 RAB3BP20337 219 aa8.43□□□□□ -1.06
MSH4-201ENST00000263187 NDUFS1P28331 727 aa8.43□□□□□ -1.06
MSH4-201ENST00000263187 GDI1P31150 447 aa8.43□□□□□ -1.06
MSH4-201ENST00000263187 PGDP52209 483 aa8.43□□□□□ -1.06
MSH4-201ENST00000263187 EEF1A1P68104 462 aaKnown RBP8.43□□□□□ -1.06
MSH4-201ENST00000263187 RUNX3Q13761 415 aa8.43□□□□□ -1.06
MSH4-201ENST00000263187 GALEQ14376 348 aa8.43□□□□□ -1.06
MSH4-201ENST00000263187 PLA1AQ53H76 456 aa8.43□□□□□ -1.06
MSH4-201ENST00000263187 LRRC28Q86X40 367 aaPredicted RBP8.43□□□□□ -1.06
MSH4-201ENST00000263187 PIAS4Q8N2W9 510 aaPredicted RBP8.43□□□□□ -1.06
MSH4-201ENST00000263187 UXS1Q8NBZ7 420 aa8.43□□□□□ -1.06
MSH4-201ENST00000263187 OR1E3Q8WZA6 343 aa8.43□□□□□ -1.06
MSH4-201ENST00000263187 TSSK2Q96PF2 358 aa8.43□□□□□ -1.06
MSH4-201ENST00000263187 APOOQ9BUR5 198 aa8.43□□□□□ -1.06
MSH4-201ENST00000263187 OR10A4Q9H209 315 aa8.43□□□□□ -1.06
MSH4-201ENST00000263187 ADGRL4Q9HBW9 690 aa8.43□□□□□ -1.06
MSH4-201ENST00000263187 ASB6Q9NWX5 421 aa8.43□□□□□ -1.06
MSH4-201ENST00000263187 OR6C2Q9NZP2 312 aa8.43□□□□□ -1.06
MSH4-201ENST00000263187 THAP10Q9P2Z0 257 aaPredicted RBP8.43□□□□□ -1.06
MSH4-201ENST00000263187 NUP210Q8TEM1 1887 aaPredicted RBP8.43□□□□□ -1.06
MSH4-201ENST00000263187 FRYLO94915 3013 aa8.43□□□□□ -1.06
MSH4-201ENST00000263187 PRICKLE3O43900 615 aaPredicted RBP8.43□□□□□ -1.06
MSH4-201ENST00000263187 SELENOFO60613 162 aa8.43□□□□□ -1.06
MSH4-201ENST00000263187 DHFRP00374 187 aa8.43□□□□□ -1.06
MSH4-201ENST00000263187 HPXP02790 462 aa8.43□□□□□ -1.06
MSH4-201ENST00000263187 HIST1H1CP16403 213 aaKnown RBP8.43□□□□□ -1.06
MSH4-201ENST00000263187 STOMP27105 288 aa8.43□□□□□ -1.06
MSH4-201ENST00000263187 SOX2P48431 317 aa8.43□□□□□ -1.06
MSH4-201ENST00000263187 HTRA4P83105 476 aaPredicted RBP8.43□□□□□ -1.06
MSH4-201ENST00000263187 FAM53BQ14153 422 aa8.43□□□□□ -1.06
MSH4-201ENST00000263187 SUZ12Q15022 739 aaKnown RBP8.43□□□□□ -1.06
MSH4-201ENST00000263187 SLC36A2Q495M3 483 aa8.43□□□□□ -1.06
MSH4-201ENST00000263187 YAF2Q8IY57 180 aa8.43□□□□□ -1.06
MSH4-201ENST00000263187 SLC38A6Q8IZM9 456 aa8.43□□□□□ -1.06
MSH4-201ENST00000263187 ZNF527Q8NB42 609 aa8.43□□□□□ -1.06
MSH4-201ENST00000263187 CEP76Q8TAP6 659 aa8.43□□□□□ -1.06
MSH4-201ENST00000263187 SUN5Q8TC36 379 aa8.43□□□□□ -1.06
MSH4-201ENST00000263187 SNX33Q8WV41 574 aa8.43□□□□□ -1.06
MSH4-201ENST00000263187 GIMAP1Q8WWP7 306 aa8.43□□□□□ -1.06
MSH4-201ENST00000263187 WDR89Q96FK6 387 aaPredicted RBP8.43□□□□□ -1.06
MSH4-201ENST00000263187 FOXN4Q96NZ1 517 aa8.43□□□□□ -1.06
MSH4-201ENST00000263187 NMNAT3Q96T66 252 aa8.43□□□□□ -1.06
MSH4-201ENST00000263187 SEMA4CQ9C0C4 833 aa8.43□□□□□ -1.06
MSH4-201ENST00000263187 OR51J1Q9H342 316 aa8.43□□□□□ -1.06
MSH4-201ENST00000263187 ERVMER34-1Q9H9K5 563 aa8.43□□□□□ -1.06
MSH4-201ENST00000263187 ISYNA1Q9NPH2 558 aa8.43□□□□□ -1.06
MSH4-201ENST00000263187 PPIEQ9UNP9 301 aaKnown RBP8.43□□□□□ -1.06
MSH4-201ENST00000263187 POLHQ9Y253 713 aa8.43□□□□□ -1.06
MSH4-201ENST00000263187 MED31Q9Y3C7 131 aa8.43□□□□□ -1.06
MSH4-201ENST00000263187 IER3IP1Q9Y5U9 82 aa8.43□□□□□ -1.06
MSH4-201ENST00000263187 A0A1B0GTH9 108 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 A8MUA0 341 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 CACNB4O00305 520 aaPredicted RBP8.42□□□□□ -1.06
MSH4-201ENST00000263187 B3GALT2O43825 422 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 STX11O75558 287 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 HLA-DQB1P01920 261 aa8.42□□□□□ -1.06
MSH4-201ENST00000263187 TFP02787 698 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms