RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 SEMG1P04279 462 aa15□□□□□ -0.01
CHCHD3-201ENST00000262570 IFNW1P05000 195 aa15□□□□□ -0.01
CHCHD3-201ENST00000262570 PTGS2P35354 604 aa15□□□□□ -0.01
CHCHD3-201ENST00000262570 POLR2HP52434 150 aaKnown RBP15□□□□□ -0.01
CHCHD3-201ENST00000262570 BCL2A1Q16548 175 aa15□□□□□ -0.01
CHCHD3-201ENST00000262570 ENTPD8Q5MY95 495 aa15□□□□□ -0.01
CHCHD3-201ENST00000262570 TSPYL5Q86VY4 417 aaPredicted RBP15□□□□□ -0.01
CHCHD3-201ENST00000262570 ADGRG3Q86Y34 549 aa15□□□□□ -0.01
CHCHD3-201ENST00000262570 AQP12AQ8IXF9 295 aa15□□□□□ -0.01
CHCHD3-201ENST00000262570 ADAMTS16Q8TE57 1224 aa15□□□□□ -0.01
CHCHD3-201ENST00000262570 DNAJA4Q8WW22 397 aaPredicted RBP15□□□□□ -0.01
CHCHD3-201ENST00000262570 POP5Q969H6 163 aaKnown RBP15□□□□□ -0.01
CHCHD3-201ENST00000262570 TRIM15Q9C019 465 aa15□□□□□ -0.01
CHCHD3-201ENST00000262570 ACAD8Q9UKU7 415 aa15□□□□□ -0.01
CHCHD3-201ENST00000262570 ZNF835Q9Y2P0 537 aa15□□□□□ -0.01
CHCHD3-201ENST00000262570 AP4B1Q9Y6B7 739 aa15□□□□□ -0.01
CHCHD3-201ENST00000262570 V9GYQ6 96 aa15□□□□□ -0.01
CHCHD3-201ENST00000262570 A0A0B4J2E0 115 aa14.99□□□□□ -0.01
CHCHD3-201ENST00000262570 A0A1B0GX12 115 aa14.99□□□□□ -0.01
CHCHD3-201ENST00000262570 CPSF4LA6NMK7 179 aaKnown RBP14.99□□□□□ -0.01
CHCHD3-201ENST00000262570 PEPDP12955 493 aa14.99□□□□□ -0.01
CHCHD3-201ENST00000262570 ZNF708P17019 499 aa14.99□□□□□ -0.01
CHCHD3-201ENST00000262570 CLDN18P56856 261 aa14.99□□□□□ -0.01
CHCHD3-201ENST00000262570 SELENBP1Q13228 472 aa14.99□□□□□ -0.01
CHCHD3-201ENST00000262570 IGFBP7Q16270 282 aa14.99□□□□□ -0.01
CHCHD3-201ENST00000262570 ZNF613Q6PF04 617 aa14.99□□□□□ -0.01
CHCHD3-201ENST00000262570 ULK3Q6PHR2 472 aa14.99□□□□□ -0.01
CHCHD3-201ENST00000262570 POMZP3Q6PJE2 187 aa14.99□□□□□ -0.01
CHCHD3-201ENST00000262570 DEF8Q6ZN54 512 aa14.99□□□□□ -0.01
CHCHD3-201ENST00000262570 TSEN54Q7Z6J9 526 aaKnown RBP14.99□□□□□ -0.01
CHCHD3-201ENST00000262570 ATG4DQ86TL0 474 aaPredicted RBP14.99□□□□□ -0.01
CHCHD3-201ENST00000262570 LILRA2Q8N149 483 aa14.99□□□□□ -0.01
CHCHD3-201ENST00000262570 C7orf34Q96L11 122 aa14.99□□□□□ -0.01
CHCHD3-201ENST00000262570 PRDM14Q9GZV8 571 aa14.99□□□□□ -0.01
CHCHD3-201ENST00000262570 C12orf10Q9HB07 376 aa14.99□□□□□ -0.01
CHCHD3-201ENST00000262570 RPS6KB2Q9UBS0 482 aa14.99□□□□□ -0.01
CHCHD3-201ENST00000262570 CHRNA9Q9UGM1 479 aa14.99□□□□□ -0.01
CHCHD3-201ENST00000262570 POLEQ07864 2286 aa14.99□□□□□ -0.01
CHCHD3-201ENST00000262570 TMED7-TICAM2A0A0A6YYA0 188 aa14.98□□□□□ -0.01
CHCHD3-201ENST00000262570 BCKDKO14874 412 aa14.98□□□□□ -0.01
CHCHD3-201ENST00000262570 CPN1P15169 458 aa14.98□□□□□ -0.01
CHCHD3-201ENST00000262570 POU3F2P20265 443 aaPredicted RBP14.98□□□□□ -0.01
CHCHD3-201ENST00000262570 MAP2K6P52564 334 aa14.98□□□□□ -0.01
CHCHD3-201ENST00000262570 VLDLRP98155 873 aa14.98□□□□□ -0.01
CHCHD3-201ENST00000262570 RBPJQ06330 500 aa14.98□□□□□ -0.01
CHCHD3-201ENST00000262570 PIN1Q13526 163 aaPredicted RBP14.98□□□□□ -0.01
CHCHD3-201ENST00000262570 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.98□□□□□ -0.014e-7■■□□□ 13.4
CHCHD3-201ENST00000262570 GXYLT1Q4G148 440 aa14.98□□□□□ -0.01
CHCHD3-201ENST00000262570 IQCCQ4KMZ1 466 aa14.98□□□□□ -0.01
CHCHD3-201ENST00000262570 ALG10BQ5I7T1 473 aa14.98□□□□□ -0.01
CHCHD3-201ENST00000262570 C3orf33Q6P1S2 294 aa14.98□□□□□ -0.01
CHCHD3-201ENST00000262570 Q6ZPB1 254 aaPredicted RBP14.98□□□□□ -0.01
CHCHD3-201ENST00000262570 GALNT11Q8NCW6 608 aa14.98□□□□□ -0.01
CHCHD3-201ENST00000262570 SLC38A4Q969I6 547 aa14.98□□□□□ -0.01
CHCHD3-201ENST00000262570 WDYHV1Q96HA8 205 aa14.98□□□□□ -0.01
CHCHD3-201ENST00000262570 POLR2J2Q9GZM3 115 aaKnown RBP14.98□□□□□ -0.01
CHCHD3-201ENST00000262570 POLR2J3Q9H1A7 115 aaKnown RBP14.98□□□□□ -0.01
CHCHD3-201ENST00000262570 TMEM185BQ9H7F4 350 aa14.98□□□□□ -0.01
CHCHD3-201ENST00000262570 SERINC1Q9NRX5 453 aa14.98□□□□□ -0.01
CHCHD3-201ENST00000262570 STOML1Q9UBI4 398 aa14.98□□□□□ -0.01
CHCHD3-201ENST00000262570 TMED7Q9Y3B3 224 aa14.98□□□□□ -0.01
CHCHD3-201ENST00000262570 TRAPPC13A5PLN9 417 aa14.98□□□□□ -0.01
CHCHD3-201ENST00000262570 SLC19A2O60779 497 aa14.98□□□□□ -0.01
CHCHD3-201ENST00000262570 THY1P04216 161 aa14.98□□□□□ -0.01
CHCHD3-201ENST00000262570 ABOP16442 354 aa14.98□□□□□ -0.01
CHCHD3-201ENST00000262570 CXCR1P25024 350 aa14.98□□□□□ -0.01
CHCHD3-201ENST00000262570 FKBP2P26885 142 aaKnown RBP14.98□□□□□ -0.01
CHCHD3-201ENST00000262570 SUCLG1P53597 346 aaKnown RBP14.98□□□□□ -0.01
CHCHD3-201ENST00000262570 CDH12P55289 794 aa14.98□□□□□ -0.01
CHCHD3-201ENST00000262570 CLDN15P56746 228 aa14.98□□□□□ -0.01
CHCHD3-201ENST00000262570 CLDN20P56880 219 aa14.98□□□□□ -0.01
CHCHD3-201ENST00000262570 EMC4Q5J8M3 183 aa14.98□□□□□ -0.01
CHCHD3-201ENST00000262570 SWT1Q5T5J6 900 aaKnown RBP14.98□□□□□ -0.01
CHCHD3-201ENST00000262570 WLSQ5T9L3 541 aa14.98□□□□□ -0.01
CHCHD3-201ENST00000262570 C1orf146Q5VVC0 180 aa14.98□□□□□ -0.01
CHCHD3-201ENST00000262570 FAM57AQ8TBR7 257 aa14.98□□□□□ -0.01
CHCHD3-201ENST00000262570 SLC47A1Q96FL8 570 aa14.98□□□□□ -0.01
CHCHD3-201ENST00000262570 SEPHS2Q99611 448 aa14.98□□□□□ -0.01
CHCHD3-201ENST00000262570 IL1RAPQ9NPH3 570 aa14.98□□□□□ -0.01
CHCHD3-201ENST00000262570 NDUFAF4Q9P032 175 aa14.98□□□□□ -0.01
CHCHD3-201ENST00000262570 A4GNTQ9UNA3 340 aa14.98□□□□□ -0.01
CHCHD3-201ENST00000262570 ENPP4Q9Y6X5 453 aa14.98□□□□□ -0.01
CHCHD3-201ENST00000262570 RELNP78509 3460 aa14.98□□□□□ -0.01
CHCHD3-201ENST00000262570 ZGRF1Q86YA3 2104 aa14.97□□□□□ -0.01
CHCHD3-201ENST00000262570 TCRBV3S1A0A5B6 114 aa14.97□□□□□ -0.01
CHCHD3-201ENST00000262570 TMEM72A0PK05 275 aa14.97□□□□□ -0.01
CHCHD3-201ENST00000262570 H0YC42 278 aa14.97□□□□□ -0.01
CHCHD3-201ENST00000262570 ZNF208O43345 1280 aa14.97□□□□□ -0.01
CHCHD3-201ENST00000262570 OR5F1O95221 314 aa14.97□□□□□ -0.01
CHCHD3-201ENST00000262570 OPN1LWP04000 364 aa14.97□□□□□ -0.01
CHCHD3-201ENST00000262570 TPOP07202 933 aa14.97□□□□□ -0.01
CHCHD3-201ENST00000262570 PNMTP11086 282 aa14.97□□□□□ -0.01
CHCHD3-201ENST00000262570 SHC1P29353 583 aa14.97□□□□□ -0.01
CHCHD3-201ENST00000262570 YAP1P46937 504 aaKnown RBP14.97□□□□□ -0.01
CHCHD3-201ENST00000262570 TPD52P55327 224 aaPredicted RBP14.97□□□□□ -0.01
CHCHD3-201ENST00000262570 MRPL49Q13405 166 aaKnown RBP14.97□□□□□ -0.01
CHCHD3-201ENST00000262570 TMEM176BQ3YBM2 270 aaPredicted RBP14.97□□□□□ -0.01
CHCHD3-201ENST00000262570 GGNQ86UU5 652 aa14.97□□□□□ -0.01
CHCHD3-201ENST00000262570 PM20D2Q8IYS1 436 aa14.97□□□□□ -0.01
CHCHD3-201ENST00000262570 ATP6V1C2Q8NEY4 427 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms