RNA–Protein interactions for RNA: ENST00000249910.5

MBD4-201, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MBD4, Length 2,470 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-201ENST00000249910 FGF20Q9NP95 211 aaPredicted RBP13.54□□□□□ -0.24
MBD4-201ENST00000249910 FGF21Q9NSA1 209 aa13.54□□□□□ -0.24
MBD4-201ENST00000249910 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.54□□□□□ -0.24
MBD4-201ENST00000249910 CAB39Q9Y376 341 aaPredicted RBP13.54□□□□□ -0.24
MBD4-201ENST00000249910 CPED1A4D0V7 1026 aa13.53□□□□□ -0.24
MBD4-201ENST00000249910 SERINC4A6NH21 518 aa13.53□□□□□ -0.24
MBD4-201ENST00000249910 B3GALNT1O75752 331 aa13.53□□□□□ -0.24
MBD4-201ENST00000249910 PPP1R3DO95685 299 aa13.53□□□□□ -0.24
MBD4-201ENST00000249910 ZNF12P17014 697 aa13.53□□□□□ -0.24
MBD4-201ENST00000249910 RPS7P62081 194 aaKnown RBP13.53□□□□□ -0.24
MBD4-201ENST00000249910 ZNF141Q15928 474 aa13.53□□□□□ -0.24
MBD4-201ENST00000249910 RELTQ969Z4 430 aa13.53□□□□□ -0.24
MBD4-201ENST00000249910 ADOQ96SZ5 270 aa13.53□□□□□ -0.24
MBD4-201ENST00000249910 ZNF649Q9BS31 505 aa13.53□□□□□ -0.24
MBD4-201ENST00000249910 ISG20L2Q9H9L3 353 aaKnown RBP13.53□□□□□ -0.24
MBD4-201ENST00000249910 PALMDQ9NP74 551 aa13.53□□□□□ -0.24
MBD4-201ENST00000249910 ABCB10Q9NRK6 738 aa13.53□□□□□ -0.24
MBD4-201ENST00000249910 CRNNQ9UBG3 495 aaPredicted RBP13.53□□□□□ -0.24
MBD4-201ENST00000249910 FER1L5A0AVI2 2057 aa13.53□□□□□ -0.24
MBD4-201ENST00000249910 OIP5O43482 229 aa13.53□□□□□ -0.24
MBD4-201ENST00000249910 HMGN1P05114 100 aa13.53□□□□□ -0.24
MBD4-201ENST00000249910 MRPL3P09001 348 aaKnown RBP13.53□□□□□ -0.24
MBD4-201ENST00000249910 IFI6P09912 130 aa13.53□□□□□ -0.24
MBD4-201ENST00000249910 HPGDP15428 266 aa13.53□□□□□ -0.24
MBD4-201ENST00000249910 HTR1FP30939 366 aa13.53□□□□□ -0.24
MBD4-201ENST00000249910 FHL1Q13642 323 aa13.53□□□□□ -0.24
MBD4-201ENST00000249910 SERTAD2Q14140 314 aa13.53□□□□□ -0.24
MBD4-201ENST00000249910 RNLSQ5VYX0 342 aa13.53□□□□□ -0.24
MBD4-201ENST00000249910 NIPAL1Q6NVV3 410 aa13.53□□□□□ -0.24
MBD4-201ENST00000249910 LNX2Q8N448 690 aa13.53□□□□□ -0.24
MBD4-201ENST00000249910 LSMEM1Q8N8F7 131 aa13.53□□□□□ -0.24
MBD4-201ENST00000249910 PMM1Q92871 262 aa13.53□□□□□ -0.24
MBD4-201ENST00000249910 NDC1Q9BTX1 674 aa13.53□□□□□ -0.24
MBD4-201ENST00000249910 ZNF426Q9BUY5 554 aa13.53□□□□□ -0.24
MBD4-201ENST00000249910 RTN4RQ9BZR6 473 aa13.53□□□□□ -0.24
MBD4-201ENST00000249910 TXNL4BQ9NX01 149 aaKnown RBP13.53□□□□□ -0.24
MBD4-201ENST00000249910 DAPK2Q9UIK4 370 aa13.53□□□□□ -0.24
MBD4-201ENST00000249910 MKL2Q9ULH7 1088 aa13.53□□□□□ -0.24
MBD4-201ENST00000249910 STUB1Q9UNE7 303 aa13.53□□□□□ -0.24
MBD4-201ENST00000249910 GPR179Q6PRD1 2367 aa13.52□□□□□ -0.24
MBD4-201ENST00000249910 RGS5O15539 181 aa13.52□□□□□ -0.24
MBD4-201ENST00000249910 TBX1O43435 398 aa13.52□□□□□ -0.24
MBD4-201ENST00000249910 PTP4A3O75365 173 aa13.52□□□□□ -0.24
MBD4-201ENST00000249910 CLEC2LP0C7M8 214 aa13.52□□□□□ -0.24
MBD4-201ENST00000249910 CELP19835 753 aa13.52□□□□□ -0.24
MBD4-201ENST00000249910 GTF2E2P29084 291 aaKnown RBP13.52□□□□□ -0.24
MBD4-201ENST00000249910 ULK3Q6PHR2 472 aa13.52□□□□□ -0.24
MBD4-201ENST00000249910 D2HGDHQ8N465 521 aa13.52□□□□□ -0.24
MBD4-201ENST00000249910 SLC37A3Q8NCC5 494 aa13.52□□□□□ -0.24
MBD4-201ENST00000249910 OR51L1Q8NGJ5 315 aa13.52□□□□□ -0.24
MBD4-201ENST00000249910 LILRB1Q8NHL6 650 aaPredicted RBP13.52□□□□□ -0.24
MBD4-201ENST00000249910 PHOSPHO1Q8TCT1 267 aa13.52□□□□□ -0.24
MBD4-201ENST00000249910 SLC2A12Q8TD20 617 aa13.52□□□□□ -0.24
MBD4-201ENST00000249910 ADAMTS18Q8TE60 1221 aa13.52□□□□□ -0.24
MBD4-201ENST00000249910 CHPT1Q8WUD6 406 aa13.52□□□□□ -0.24
MBD4-201ENST00000249910 CCDC74AQ96AQ1 378 aa13.52□□□□□ -0.24
MBD4-201ENST00000249910 TRIM2Q9C040 744 aa13.52□□□□□ -0.24
MBD4-201ENST00000249910 TNFRSF10DQ9UBN6 386 aa13.52□□□□□ -0.24
MBD4-201ENST00000249910 CTSFQ9UBX1 484 aa13.52□□□□□ -0.24
MBD4-201ENST00000249910 SEC14L4Q9UDX3 406 aa13.52□□□□□ -0.24
MBD4-201ENST00000249910 GMEB2Q9UKD1 530 aa13.52□□□□□ -0.24
MBD4-201ENST00000249910 CFL2Q9Y281 166 aa13.52□□□□□ -0.24
MBD4-201ENST00000249910 MPDZO75970 2070 aa13.52□□□□□ -0.24
MBD4-201ENST00000249910 IGHV3-20A0A0C4DH32 117 aa13.52□□□□□ -0.25
MBD4-201ENST00000249910 TMEM129A0AVI4 362 aa13.52□□□□□ -0.25
MBD4-201ENST00000249910 CDK2AP1O14519 115 aa13.52□□□□□ -0.25
MBD4-201ENST00000249910 RCBTB2O95199 551 aa13.52□□□□□ -0.25
MBD4-201ENST00000249910 CPEP16870 476 aa13.52□□□□□ -0.25
MBD4-201ENST00000249910 ARRB1P49407 418 aaPredicted RBP13.52□□□□□ -0.25
MBD4-201ENST00000249910 CRMP1Q14194 572 aa13.52□□□□□ -0.25
MBD4-201ENST00000249910 PRPF38BQ5VTL8 546 aaKnown RBP13.52□□□□□ -0.25
MBD4-201ENST00000249910 ZNF574Q6ZN55 896 aaPredicted RBP13.52□□□□□ -0.25
MBD4-201ENST00000249910 LINC00299Q6ZSB3 139 aa13.52□□□□□ -0.25
MBD4-201ENST00000249910 RFPL4BQ6ZWI9 263 aa13.52□□□□□ -0.25
MBD4-201ENST00000249910 PARP16Q8N5Y8 322 aa13.52□□□□□ -0.25
MBD4-201ENST00000249910 CLDN22Q8N7P3 220 aa13.52□□□□□ -0.25
MBD4-201ENST00000249910 ZNF485Q8NCK3 441 aa13.52□□□□□ -0.25
MBD4-201ENST00000249910 ARHGAP9Q9BRR9 750 aa13.52□□□□□ -0.25
MBD4-201ENST00000249910 TMED9Q9BVK6 235 aa13.52□□□□□ -0.25
MBD4-201ENST00000249910 HDHD5Q9BXW7 423 aa13.52□□□□□ -0.25
MBD4-201ENST00000249910 NXF2Q9GZY0 626 aaKnown RBP13.52□□□□□ -0.25
MBD4-201ENST00000249910 MCCC2Q9HCC0 563 aa13.52□□□□□ -0.25
MBD4-201ENST00000249910 MED17Q9NVC6 651 aa13.52□□□□□ -0.25
MBD4-201ENST00000249910 C14orf105Q9NVL8 296 aa13.52□□□□□ -0.25
MBD4-201ENST00000249910 ERVK13-1Q9NX77 482 aa13.52□□□□□ -0.25
MBD4-201ENST00000249910 RPS6KB2Q9UBS0 482 aa13.52□□□□□ -0.25
MBD4-201ENST00000249910 SSR3Q9UNL2 185 aa13.52□□□□□ -0.25
MBD4-201ENST00000249910 ADAM18Q9Y3Q7 739 aa13.52□□□□□ -0.25
MBD4-201ENST00000249910 BLACEA4D250 179 aa13.51□□□□□ -0.25
MBD4-201ENST00000249910 C12orf71A8MTZ7 269 aa13.51□□□□□ -0.25
MBD4-201ENST00000249910 IMPA2O14732 288 aa13.51□□□□□ -0.25
MBD4-201ENST00000249910 CDRT1O95170 752 aa13.51□□□□□ -0.25
MBD4-201ENST00000249910 PAICSP22234 425 aaKnown RBP13.51□□□□□ -0.25
MBD4-201ENST00000249910 SOX6P35712 828 aa13.51□□□□□ -0.25
MBD4-201ENST00000249910 CAV3P56539 151 aa13.51□□□□□ -0.25
MBD4-201ENST00000249910 TRIM16LQ309B1 348 aa13.51□□□□□ -0.25
MBD4-201ENST00000249910 CRTC2Q53ET0 693 aaPredicted RBP13.51□□□□□ -0.25
MBD4-201ENST00000249910 KLHL26Q53HC5 615 aa13.51□□□□□ -0.25
MBD4-201ENST00000249910 ARHGAP40Q5TG30 622 aa13.51□□□□□ -0.25
MBD4-201ENST00000249910 NIPAL3Q6P499 406 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms