RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 HK1P19367 917 aa17.98■□□□□ 0.47
CDC42EP1-201ENST00000249014 OR12D2P58182 307 aa17.98■□□□□ 0.47
CDC42EP1-201ENST00000249014 ZNF267Q14586 743 aaPredicted RBP17.98■□□□□ 0.47
CDC42EP1-201ENST00000249014 SF3B4Q15427 424 aaKnown RBP eCLIP17.98■□□□□ 0.474e-9■□□□□ 8.5
CDC42EP1-201ENST00000249014 ZNF141Q15928 474 aa17.98■□□□□ 0.47
CDC42EP1-201ENST00000249014 IDNKQ5T6J7 187 aa17.98■□□□□ 0.47
CDC42EP1-201ENST00000249014 RFLNBQ8N5W9 214 aa17.98■□□□□ 0.47
CDC42EP1-201ENST00000249014 NECTIN4Q96NY8 510 aa17.98■□□□□ 0.47
CDC42EP1-201ENST00000249014 MAP3K3Q99759 626 aa17.98■□□□□ 0.47
CDC42EP1-201ENST00000249014 ORAI3Q9BRQ5 295 aa17.98■□□□□ 0.47
CDC42EP1-201ENST00000249014 EVA1AQ9H8M9 152 aa17.98■□□□□ 0.47
CDC42EP1-201ENST00000249014 J3QLW9 94 aa17.97■□□□□ 0.47
CDC42EP1-201ENST00000249014 CTNSO60931 367 aa17.97■□□□□ 0.47
CDC42EP1-201ENST00000249014 GUSBP08236 651 aa17.97■□□□□ 0.47
CDC42EP1-201ENST00000249014 GSTT2P0CG29 244 aa17.97■□□□□ 0.47
CDC42EP1-201ENST00000249014 GSTT2BP0CG30 244 aa17.97■□□□□ 0.47
CDC42EP1-201ENST00000249014 ZNF19P17023 458 aa17.97■□□□□ 0.47
CDC42EP1-201ENST00000249014 ELK1P19419 428 aa17.97■□□□□ 0.47
CDC42EP1-201ENST00000249014 SLC3A1Q07837 685 aa17.97■□□□□ 0.47
CDC42EP1-201ENST00000249014 FAAH2Q6GMR7 532 aa17.97■□□□□ 0.47
CDC42EP1-201ENST00000249014 FAM160A2Q8N612 972 aaPredicted RBP17.97■□□□□ 0.47
CDC42EP1-201ENST00000249014 ERVMER34-1Q9H9K5 563 aa17.97■□□□□ 0.47
CDC42EP1-201ENST00000249014 MOV10Q9HCE1 1003 aaKnown RBP17.97■□□□□ 0.47
CDC42EP1-201ENST00000249014 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.97■□□□□ 0.47
CDC42EP1-201ENST00000249014 LRIT1Q9P2V4 623 aa17.97■□□□□ 0.47
CDC42EP1-201ENST00000249014 BAIAP2Q9UQB8 552 aa17.97■□□□□ 0.47
CDC42EP1-201ENST00000249014 LRRN3E7EW58 273 aa17.97■□□□□ 0.47
CDC42EP1-201ENST00000249014 SOX30O94993 753 aa17.97■□□□□ 0.47
CDC42EP1-201ENST00000249014 CT45A8P0DMV1 189 aa17.97■□□□□ 0.47
CDC42EP1-201ENST00000249014 CT45A9P0DMV2 189 aa17.97■□□□□ 0.47
CDC42EP1-201ENST00000249014 MAOAP21397 527 aa17.97■□□□□ 0.47
CDC42EP1-201ENST00000249014 SLC6A6P31641 620 aa17.97■□□□□ 0.47
CDC42EP1-201ENST00000249014 RCVRNP35243 200 aa17.97■□□□□ 0.47
CDC42EP1-201ENST00000249014 GPR3P46089 330 aa17.97■□□□□ 0.47
CDC42EP1-201ENST00000249014 IGLV3-21P80748 117 aaPredicted RBP17.97■□□□□ 0.47
CDC42EP1-201ENST00000249014 RIN1Q13671 783 aa17.97■□□□□ 0.47
CDC42EP1-201ENST00000249014 BCL2A1Q16548 175 aa17.97■□□□□ 0.47
CDC42EP1-201ENST00000249014 CT45A2Q5DJT8 189 aa17.97■□□□□ 0.47
CDC42EP1-201ENST00000249014 TRIQKQ629K1 86 aa17.97■□□□□ 0.47
CDC42EP1-201ENST00000249014 VASH1Q7L8A9 365 aaPredicted RBP17.97■□□□□ 0.47
CDC42EP1-201ENST00000249014 GLCCI1Q86VQ1 547 aa17.97■□□□□ 0.47
CDC42EP1-201ENST00000249014 PARGQ86W56 976 aa17.97■□□□□ 0.47
CDC42EP1-201ENST00000249014 LRRC17Q8N6Y2 441 aa17.97■□□□□ 0.47
CDC42EP1-201ENST00000249014 OR5M3Q8NGP4 307 aa17.97■□□□□ 0.47
CDC42EP1-201ENST00000249014 CAPSLQ8WWF8 208 aa17.97■□□□□ 0.47
CDC42EP1-201ENST00000249014 ERMAPQ96PL5 475 aaPredicted RBP17.97■□□□□ 0.47
CDC42EP1-201ENST00000249014 LRRN3Q9H3W5 708 aa17.97■□□□□ 0.47
CDC42EP1-201ENST00000249014 TMEM165Q9HC07 324 aa17.97■□□□□ 0.47
CDC42EP1-201ENST00000249014 PRTFDC1Q9NRG1 225 aa17.97■□□□□ 0.47
CDC42EP1-201ENST00000249014 HAO2Q9NYQ3 351 aa17.97■□□□□ 0.47
CDC42EP1-201ENST00000249014 WSB2Q9NYS7 404 aaPredicted RBP17.97■□□□□ 0.47
CDC42EP1-201ENST00000249014 A0A1W2PPC4 97 aa17.96■□□□□ 0.47
CDC42EP1-201ENST00000249014 F8A1P23610 371 aa17.96■□□□□ 0.47
CDC42EP1-201ENST00000249014 HOXD12P35452 270 aa17.96■□□□□ 0.47
CDC42EP1-201ENST00000249014 HCCSP53701 268 aa17.96■□□□□ 0.47
CDC42EP1-201ENST00000249014 TBRG1Q3YBR2 411 aa17.96■□□□□ 0.47
CDC42EP1-201ENST00000249014 ULK3Q6PHR2 472 aa17.96■□□□□ 0.47
CDC42EP1-201ENST00000249014 GPALPP1Q8IXQ4 340 aa17.96■□□□□ 0.47
CDC42EP1-201ENST00000249014 ARL14Q8N4G2 192 aa17.96■□□□□ 0.47
CDC42EP1-201ENST00000249014 C19orf18Q8NEA5 215 aa17.96■□□□□ 0.47
CDC42EP1-201ENST00000249014 SDR9C7Q8NEX9 313 aa17.96■□□□□ 0.47
CDC42EP1-201ENST00000249014 OR52E2Q8NGJ4 325 aa17.96■□□□□ 0.47
CDC42EP1-201ENST00000249014 OR5J2Q8NH18 312 aa17.96■□□□□ 0.47
CDC42EP1-201ENST00000249014 OR4C3Q8NH37 302 aa17.96■□□□□ 0.47
CDC42EP1-201ENST00000249014 RLN3Q8WXF3 142 aa17.96■□□□□ 0.47
CDC42EP1-201ENST00000249014 KLHDC7BQ96G42 594 aa17.96■□□□□ 0.47
CDC42EP1-201ENST00000249014 PGLYRP3Q96LB9 341 aa17.96■□□□□ 0.47
CDC42EP1-201ENST00000249014 TMEM43Q9BTV4 400 aa17.96■□□□□ 0.47
CDC42EP1-201ENST00000249014 TTTY10Q9BZA0 68 aa17.96■□□□□ 0.47
CDC42EP1-201ENST00000249014 RNF121Q9H920 327 aa17.96■□□□□ 0.47
CDC42EP1-201ENST00000249014 CHRNA9Q9UGM1 479 aa17.96■□□□□ 0.47
CDC42EP1-201ENST00000249014 SERTAD3Q9UJW9 196 aa17.96■□□□□ 0.47
CDC42EP1-201ENST00000249014 PCDHGB7Q9Y5F8 929 aa17.96■□□□□ 0.47
CDC42EP1-201ENST00000249014 HMX3A6NHT5 357 aa17.96■□□□□ 0.46
CDC42EP1-201ENST00000249014 HIST1H1CP16403 213 aaKnown RBP17.96■□□□□ 0.46
CDC42EP1-201ENST00000249014 MYL9P24844 172 aa17.96■□□□□ 0.46
CDC42EP1-201ENST00000249014 PTBP1P26599 531 aaKnown RBP eCLIP17.96■□□□□ 0.46
CDC42EP1-201ENST00000249014 ACVR1BP36896 505 aa17.96■□□□□ 0.46
CDC42EP1-201ENST00000249014 DDOSTP39656 456 aa17.96■□□□□ 0.46
CDC42EP1-201ENST00000249014 PGDP52209 483 aa17.96■□□□□ 0.46
CDC42EP1-201ENST00000249014 OR10A3P58181 314 aa17.96■□□□□ 0.46
CDC42EP1-201ENST00000249014 HBMQ6B0K9 141 aa17.96■□□□□ 0.46
CDC42EP1-201ENST00000249014 ARHGAP11AQ6P4F7 1023 aa17.96■□□□□ 0.46
CDC42EP1-201ENST00000249014 IL20RBQ6UXL0 311 aa17.96■□□□□ 0.46
CDC42EP1-201ENST00000249014 METTL27Q8N6F8 245 aaPredicted RBP17.96■□□□□ 0.46
CDC42EP1-201ENST00000249014 OR4K13Q8NH42 304 aa17.96■□□□□ 0.46
CDC42EP1-201ENST00000249014 C16orf52Q8NHV5 167 aa17.96■□□□□ 0.46
CDC42EP1-201ENST00000249014 ENKURQ8TC29 256 aa17.96■□□□□ 0.46
CDC42EP1-201ENST00000249014 DGAT2Q96PD7 388 aa17.96■□□□□ 0.46
CDC42EP1-201ENST00000249014 TP63Q9H3D4 680 aaPredicted RBP17.96■□□□□ 0.46
CDC42EP1-201ENST00000249014 ERVK-19Q9WJR5 959 aa17.96■□□□□ 0.46
CDC42EP1-201ENST00000249014 FAM25AB3EWG3 89 aa17.95■□□□□ 0.46
CDC42EP1-201ENST00000249014 FAM25CB3EWG5 89 aa17.95■□□□□ 0.46
CDC42EP1-201ENST00000249014 FAM25GB3EWG6 89 aa17.95■□□□□ 0.46
CDC42EP1-201ENST00000249014 SRPX2O60687 465 aaPredicted RBP17.95■□□□□ 0.46
CDC42EP1-201ENST00000249014 SC5DO75845 299 aa17.95■□□□□ 0.46
CDC42EP1-201ENST00000249014 THBS2P35442 1172 aa17.95■□□□□ 0.46
CDC42EP1-201ENST00000249014 MAP2K3P46734 347 aa17.95■□□□□ 0.46
CDC42EP1-201ENST00000249014 BLKP51451 505 aa17.95■□□□□ 0.46
CDC42EP1-201ENST00000249014 ATP12AP54707 1039 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms