RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 ELOA3BQ3SY89 546 aa12.96□□□□□ -0.33
SDF2-201ENST00000247020 ANKDD1AQ495B1 522 aa12.96□□□□□ -0.33
SDF2-201ENST00000247020 DESI1Q6ICB0 168 aa12.96□□□□□ -0.33
SDF2-201ENST00000247020 ACSM5Q6NUN0 579 aa12.96□□□□□ -0.33
SDF2-201ENST00000247020 OPN5Q6U736 354 aa12.96□□□□□ -0.33
SDF2-201ENST00000247020 KCTD8Q6ZWB6 473 aa12.96□□□□□ -0.33
SDF2-201ENST00000247020 PPP1R32Q7Z5V6 425 aa12.96□□□□□ -0.33
SDF2-201ENST00000247020 SATL1Q86VE3 508 aa12.96□□□□□ -0.33
SDF2-201ENST00000247020 CYP4Z2PQ8N1L4 340 aa12.96□□□□□ -0.33
SDF2-201ENST00000247020 ELOA3Q8NG57 546 aa12.96□□□□□ -0.33
SDF2-201ENST00000247020 OR8D4Q8NGM9 314 aa12.96□□□□□ -0.33
SDF2-201ENST00000247020 FANK1Q8TC84 345 aa12.96□□□□□ -0.33
SDF2-201ENST00000247020 THAP3Q8WTV1 239 aaPredicted RBP12.96□□□□□ -0.33
SDF2-201ENST00000247020 LIPHQ8WWY8 451 aa12.96□□□□□ -0.33
SDF2-201ENST00000247020 TSSK6Q9BXA6 273 aa12.96□□□□□ -0.33
SDF2-201ENST00000247020 ATP13A2Q9NQ11 1180 aa12.96□□□□□ -0.33
SDF2-201ENST00000247020 FAM86C1Q9NVL1 165 aa12.96□□□□□ -0.33
SDF2-201ENST00000247020 PAK1IP1Q9NWT1 392 aaPredicted RBP12.96□□□□□ -0.33
SDF2-201ENST00000247020 BAIAP2Q9UQB8 552 aa12.96□□□□□ -0.33
SDF2-201ENST00000247020 SIGLEC7Q9Y286 467 aa12.96□□□□□ -0.33
SDF2-201ENST00000247020 A0A0C4DFX4 3053 aa12.95□□□□□ -0.34
SDF2-201ENST00000247020 IGLV3-32A0A0A0MS00 114 aa12.95□□□□□ -0.34
SDF2-201ENST00000247020 EFCAB10A6NFE3 127 aa12.95□□□□□ -0.34
SDF2-201ENST00000247020 ANKUB1A6NFN9 424 aa12.95□□□□□ -0.34
SDF2-201ENST00000247020 SNTNA6NMZ2 147 aa12.95□□□□□ -0.34
SDF2-201ENST00000247020 ENO4A6NNW6 628 aa12.95□□□□□ -0.34
SDF2-201ENST00000247020 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.95□□□□□ -0.34
SDF2-201ENST00000247020 PTGES3LE9PB15 166 aa12.95□□□□□ -0.34
SDF2-201ENST00000247020 STMND1H3BQB6 276 aa12.95□□□□□ -0.34
SDF2-201ENST00000247020 SCO2O43819 266 aa12.95□□□□□ -0.34
SDF2-201ENST00000247020 RAD1O60671 282 aa12.95□□□□□ -0.34
SDF2-201ENST00000247020 OR2J2O76002 312 aa12.95□□□□□ -0.34
SDF2-201ENST00000247020 TNFSF15O95150 251 aa12.95□□□□□ -0.34
SDF2-201ENST00000247020 SAGP10523 405 aaPredicted RBP12.95□□□□□ -0.34
SDF2-201ENST00000247020 GAS1P54826 345 aa12.95□□□□□ -0.34
SDF2-201ENST00000247020 CRYZQ08257 329 aaKnown RBP12.95□□□□□ -0.34
SDF2-201ENST00000247020 SNTA1Q13424 505 aa12.95□□□□□ -0.34
SDF2-201ENST00000247020 TUBA3CQ13748 450 aa12.95□□□□□ -0.34
SDF2-201ENST00000247020 SMN1Q16637 294 aaKnown RBP12.95□□□□□ -0.34
SDF2-201ENST00000247020 PGGHGQ32M88 737 aa12.95□□□□□ -0.34
SDF2-201ENST00000247020 ZBED5Q49AG3 693 aa12.95□□□□□ -0.34
SDF2-201ENST00000247020 FAM69BQ5VUD6 431 aa12.95□□□□□ -0.34
SDF2-201ENST00000247020 SMARCD3Q6STE5 483 aa12.95□□□□□ -0.34
SDF2-201ENST00000247020 C5orf46Q6UWT4 87 aa12.95□□□□□ -0.34
SDF2-201ENST00000247020 GPR141Q7Z602 305 aa12.95□□□□□ -0.34
SDF2-201ENST00000247020 RAB43Q86YS6 212 aa12.95□□□□□ -0.34
SDF2-201ENST00000247020 TMEM163Q8TC26 289 aa12.95□□□□□ -0.34
SDF2-201ENST00000247020 SGTBQ96EQ0 304 aa12.95□□□□□ -0.34
SDF2-201ENST00000247020 IP6K3Q96PC2 410 aa12.95□□□□□ -0.34
SDF2-201ENST00000247020 RTN4RQ9BZR6 473 aa12.95□□□□□ -0.34
SDF2-201ENST00000247020 CPNE5Q9HCH3 593 aa12.95□□□□□ -0.34
SDF2-201ENST00000247020 TVP23BQ9NYZ1 205 aa12.95□□□□□ -0.34
SDF2-201ENST00000247020 WDR87Q6ZQQ6 2873 aa12.95□□□□□ -0.34
SDF2-201ENST00000247020 KPNA4O00629 521 aaPredicted RBP12.94□□□□□ -0.34
SDF2-201ENST00000247020 PTP4A3O75365 173 aa12.94□□□□□ -0.34
SDF2-201ENST00000247020 ITGA10O75578 1167 aa12.94□□□□□ -0.34
SDF2-201ENST00000247020 GP1BBP13224 206 aa12.94□□□□□ -0.34
SDF2-201ENST00000247020 PCMT1P22061 227 aa12.94□□□□□ -0.34
SDF2-201ENST00000247020 SLC15A1P46059 708 aa12.94□□□□□ -0.34
SDF2-201ENST00000247020 SNAPC1Q16533 368 aa12.94□□□□□ -0.34
SDF2-201ENST00000247020 ZNF791Q3KP31 576 aaPredicted RBP12.94□□□□□ -0.34
SDF2-201ENST00000247020 XAF1Q6GPH4 301 aa12.94□□□□□ -0.34
SDF2-201ENST00000247020 IGF2-ASQ6U949 168 aa12.94□□□□□ -0.34
SDF2-201ENST00000247020 C16orf47Q6ZP98 133 aaPredicted RBP12.94□□□□□ -0.34
SDF2-201ENST00000247020 RTL4Q6ZR62 310 aa12.94□□□□□ -0.34
SDF2-201ENST00000247020 IQCF1Q8N6M8 205 aa12.94□□□□□ -0.34
SDF2-201ENST00000247020 TCEANCQ8N8B7 351 aa12.94□□□□□ -0.34
SDF2-201ENST00000247020 GPR119Q8TDV5 335 aa12.94□□□□□ -0.34
SDF2-201ENST00000247020 TMEM234Q8WY98 164 aa12.94□□□□□ -0.34
SDF2-201ENST00000247020 ST8SIA1Q92185 356 aa12.94□□□□□ -0.34
SDF2-201ENST00000247020 FGF11Q92914 225 aa12.94□□□□□ -0.34
SDF2-201ENST00000247020 DGCR14Q96DF8 476 aaKnown RBP12.94□□□□□ -0.34
SDF2-201ENST00000247020 SH3YL1Q96HL8 342 aaPredicted RBP12.94□□□□□ -0.34
SDF2-201ENST00000247020 COPS4Q9BT78 406 aa12.94□□□□□ -0.34
SDF2-201ENST00000247020 RBM38Q9H0Z9 239 aaKnown RBP12.94□□□□□ -0.34
SDF2-201ENST00000247020 FN3KQ9H479 309 aa12.94□□□□□ -0.34
SDF2-201ENST00000247020 TAS2R10Q9NYW0 307 aa12.94□□□□□ -0.34
SDF2-201ENST00000247020 AASSQ9UDR5 926 aa12.94□□□□□ -0.34
SDF2-201ENST00000247020 RPL36Q9Y3U8 105 aaKnown RBP12.94□□□□□ -0.34
SDF2-201ENST00000247020 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.94□□□□□ -0.34
SDF2-201ENST00000247020 SURF4O15260 269 aa12.94□□□□□ -0.34
SDF2-201ENST00000247020 CDK1P06493 297 aa12.94□□□□□ -0.34
SDF2-201ENST00000247020 CEACAM1P13688 526 aa12.94□□□□□ -0.34
SDF2-201ENST00000247020 MST1P26927 711 aa12.94□□□□□ -0.34
SDF2-201ENST00000247020 ITPKBP27987 946 aa12.94□□□□□ -0.34
SDF2-201ENST00000247020 DLSTP36957 453 aa12.94□□□□□ -0.34
SDF2-201ENST00000247020 POLR2HP52434 150 aaKnown RBP12.94□□□□□ -0.34
SDF2-201ENST00000247020 FXYD6P3P58550 94 aa12.94□□□□□ -0.34
SDF2-201ENST00000247020 FOXB2Q5VYV0 432 aa12.94□□□□□ -0.34
SDF2-201ENST00000247020 GRINAQ7Z429 371 aa12.94□□□□□ -0.34
SDF2-201ENST00000247020 OAFQ86UD1 273 aa12.94□□□□□ -0.34
SDF2-201ENST00000247020 LNX2Q8N448 690 aa12.94□□□□□ -0.34
SDF2-201ENST00000247020 C9orf43Q8TAL5 461 aaPredicted RBP12.94□□□□□ -0.34
SDF2-201ENST00000247020 DUSP19Q8WTR2 217 aa12.94□□□□□ -0.34
SDF2-201ENST00000247020 GGHQ92820 318 aa12.94□□□□□ -0.34
SDF2-201ENST00000247020 SAMD8Q96LT4 415 aa12.94□□□□□ -0.34
SDF2-201ENST00000247020 UBQLN3Q9H347 655 aa12.94□□□□□ -0.34
SDF2-201ENST00000247020 ZNF160Q9HCG1 818 aa12.94□□□□□ -0.34
SDF2-201ENST00000247020 WDR70Q9NW82 654 aa12.94□□□□□ -0.34
SDF2-201ENST00000247020 KLRF1Q9NZS2 232 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms