RNA–Protein interactions for RNA: ENST00000226798.8

FRG1-201, Transcript of FSHD region gene 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FRG1, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRG1-201ENST00000226798 GABRA6Q16445 453 aa10.15□□□□□ -0.78
FRG1-201ENST00000226798 TIGD2Q4W5G0 525 aa10.15□□□□□ -0.78
FRG1-201ENST00000226798 RFTN2Q52LD8 501 aaPredicted RBP10.15□□□□□ -0.78
FRG1-201ENST00000226798 TMPPEQ6ZT21 453 aa10.15□□□□□ -0.78
FRG1-201ENST00000226798 TMCO5AQ8N6Q1 288 aa10.15□□□□□ -0.78
FRG1-201ENST00000226798 IFT81Q8WYA0 676 aa10.15□□□□□ -0.78
FRG1-201ENST00000226798 ST8SIA1Q92185 356 aa10.15□□□□□ -0.78
FRG1-201ENST00000226798 APH1AQ96BI3 265 aa10.15□□□□□ -0.78
FRG1-201ENST00000226798 MSI2Q96DH6 328 aaKnown RBP10.15□□□□□ -0.78
FRG1-201ENST00000226798 CHMP6Q96FZ7 201 aa10.15□□□□□ -0.78
FRG1-201ENST00000226798 MUS81Q96NY9 551 aa10.15□□□□□ -0.78
FRG1-201ENST00000226798 ACTRT3Q9BYD9 372 aa10.15□□□□□ -0.78
FRG1-201ENST00000226798 QRSL1Q9H0R6 528 aaKnown RBP10.15□□□□□ -0.78
FRG1-201ENST00000226798 TUBB1Q9H4B7 451 aa10.15□□□□□ -0.78
FRG1-201ENST00000226798 CHODLQ9H9P2 273 aa10.15□□□□□ -0.78
FRG1-201ENST00000226798 TMED5Q9Y3A6 229 aa10.15□□□□□ -0.78
FRG1-201ENST00000226798 TRAF6Q9Y4K3 522 aa10.15□□□□□ -0.78
FRG1-201ENST00000226798 KCNE3Q9Y6H6 103 aa10.15□□□□□ -0.78
FRG1-201ENST00000226798 TGP01266 2768 aa10.14□□□□□ -0.79
FRG1-201ENST00000226798 A0A1W2PR80 420 aa10.14□□□□□ -0.79
FRG1-201ENST00000226798 CIB4A0PJX0 185 aa10.14□□□□□ -0.79
FRG1-201ENST00000226798 M0R1B8 84 aa10.14□□□□□ -0.79
FRG1-201ENST00000226798 PDLIM1O00151 329 aa10.14□□□□□ -0.79
FRG1-201ENST00000226798 NDUFS8O00217 210 aa10.14□□□□□ -0.79
FRG1-201ENST00000226798 LSM1O15116 133 aaKnown RBP10.14□□□□□ -0.79
FRG1-201ENST00000226798 SCAMP2O15127 329 aaKnown RBP10.14□□□□□ -0.79
FRG1-201ENST00000226798 GLRA3O75311 464 aa10.14□□□□□ -0.79
FRG1-201ENST00000226798 ITGA5P08648 1049 aa10.14□□□□□ -0.79
FRG1-201ENST00000226798 BMP4P12644 408 aa10.14□□□□□ -0.79
FRG1-201ENST00000226798 BCKDHAP12694 445 aa10.14□□□□□ -0.79
FRG1-201ENST00000226798 NR4A2P43354 598 aa10.14□□□□□ -0.79
FRG1-201ENST00000226798 ASMTP46597 345 aa10.14□□□□□ -0.79
FRG1-201ENST00000226798 CCR4P51679 360 aa10.14□□□□□ -0.79
FRG1-201ENST00000226798 SLC16A1P53985 500 aa10.14□□□□□ -0.79
FRG1-201ENST00000226798 FOXG1P55316 489 aaPredicted RBP10.14□□□□□ -0.79
FRG1-201ENST00000226798 CSNK2A1P68400 391 aaPredicted RBP10.14□□□□□ -0.79
FRG1-201ENST00000226798 CHRNB3Q05901 458 aa10.14□□□□□ -0.79
FRG1-201ENST00000226798 SYT14P1Q58G82 188 aa10.14□□□□□ -0.79
FRG1-201ENST00000226798 OR7E24Q6IFN5 339 aa10.14□□□□□ -0.79
FRG1-201ENST00000226798 R3HCC1LQ7Z5L2 792 aaKnown RBP10.14□□□□□ -0.79
FRG1-201ENST00000226798 MTDHQ86UE4 582 aaKnown RBP10.14□□□□□ -0.79
FRG1-201ENST00000226798 DEPDC4Q8N2C3 294 aa10.14□□□□□ -0.79
FRG1-201ENST00000226798 UBE2J2Q8N2K1 259 aa10.14□□□□□ -0.79
FRG1-201ENST00000226798 C17orf53Q8N3J3 647 aaPredicted RBP10.14□□□□□ -0.79
FRG1-201ENST00000226798 ZNF614Q8N883 585 aa10.14□□□□□ -0.79
FRG1-201ENST00000226798 NOA1Q8NC60 698 aaKnown RBP10.14□□□□□ -0.79
FRG1-201ENST00000226798 OR56A1Q8NGH5 318 aa10.14□□□□□ -0.79
FRG1-201ENST00000226798 RFWD2Q8NHY2 731 aa10.14□□□□□ -0.79
FRG1-201ENST00000226798 ADAMTS15Q8TE58 950 aa10.14□□□□□ -0.79
FRG1-201ENST00000226798 SLC25A43Q8WUT9 341 aaPredicted RBP10.14□□□□□ -0.79
FRG1-201ENST00000226798 ARL8AQ96BM9 186 aa10.14□□□□□ -0.79
FRG1-201ENST00000226798 NMUR2Q9GZQ4 415 aa10.14□□□□□ -0.79
FRG1-201ENST00000226798 EML4Q9HC35 981 aaKnown RBP10.14□□□□□ -0.79
FRG1-201ENST00000226798 OXSMQ9NWU1 459 aa10.14□□□□□ -0.79
FRG1-201ENST00000226798 ASB6Q9NWX5 421 aa10.14□□□□□ -0.79
FRG1-201ENST00000226798 DCDC2Q9UHG0 476 aa10.14□□□□□ -0.79
FRG1-201ENST00000226798 ATP6V1HQ9UI12 483 aa10.14□□□□□ -0.79
FRG1-201ENST00000226798 NOSIPQ9Y314 301 aaKnown RBP10.14□□□□□ -0.79
FRG1-201ENST00000226798 IGHV4-61A0A0C4DH41 118 aa10.13□□□□□ -0.79
FRG1-201ENST00000226798 CENPVL1A0A0U1RR11 272 aa10.13□□□□□ -0.79
FRG1-201ENST00000226798 LOC100289279A0A1B0GTE1 492 aa10.13□□□□□ -0.79
FRG1-201ENST00000226798 SERINC4A6NH21 518 aa10.13□□□□□ -0.79
FRG1-201ENST00000226798 CCT8L1PA6NM43 557 aa10.13□□□□□ -0.79
FRG1-201ENST00000226798 SULT2B1O00204 365 aa10.13□□□□□ -0.79
FRG1-201ENST00000226798 AZIN1O14977 448 aa10.13□□□□□ -0.79
FRG1-201ENST00000226798 RIPK2O43353 540 aa10.13□□□□□ -0.79
FRG1-201ENST00000226798 PGRP06401 933 aa10.13□□□□□ -0.79
FRG1-201ENST00000226798 KRT16P08779 473 aa10.13□□□□□ -0.79
FRG1-201ENST00000226798 LAMP1P11279 417 aa10.13□□□□□ -0.79
FRG1-201ENST00000226798 HNF1AP20823 631 aa10.13□□□□□ -0.79
FRG1-201ENST00000226798 APOBEC3AP31941 199 aaPredicted RBP10.13□□□□□ -0.79
FRG1-201ENST00000226798 HPCAL1P37235 193 aa10.13□□□□□ -0.79
FRG1-201ENST00000226798 CCT3P49368 545 aaKnown RBP10.13□□□□□ -0.79
FRG1-201ENST00000226798 SESN3P58005 492 aa10.13□□□□□ -0.79
FRG1-201ENST00000226798 PHC1P78364 1004 aa10.13□□□□□ -0.79
FRG1-201ENST00000226798 SLC25A3Q00325 362 aa10.13□□□□□ -0.79
FRG1-201ENST00000226798 TP53BP2Q13625 1128 aa10.13□□□□□ -0.79
FRG1-201ENST00000226798 GGTLC2Q14390 218 aa10.13□□□□□ -0.79
FRG1-201ENST00000226798 SWI5Q1ZZU3 235 aa10.13□□□□□ -0.79
FRG1-201ENST00000226798 MST1LQ2TV78 715 aa10.13□□□□□ -0.79
FRG1-201ENST00000226798 CFAP157Q5JU67 520 aa10.13□□□□□ -0.79
FRG1-201ENST00000226798 PDZK1Q5T2W1 519 aa10.13□□□□□ -0.79
FRG1-201ENST00000226798 LIPMQ5VYY2 423 aa10.13□□□□□ -0.79
FRG1-201ENST00000226798 WDR31Q8NA23 367 aa10.13□□□□□ -0.79
FRG1-201ENST00000226798 FAM71CQ8NEG0 241 aa10.13□□□□□ -0.79
FRG1-201ENST00000226798 C1orf162Q8NEQ5 155 aaPredicted RBP10.13□□□□□ -0.79
FRG1-201ENST00000226798 OR7A2PQ8NGA2 310 aa10.13□□□□□ -0.79
FRG1-201ENST00000226798 SFXN5Q8TD22 340 aa10.13□□□□□ -0.79
FRG1-201ENST00000226798 SORCS2Q96PQ0 1159 aa10.13□□□□□ -0.79
FRG1-201ENST00000226798 PIMREGQ9BSJ6 248 aa10.13□□□□□ -0.79
FRG1-201ENST00000226798 THUMPD3Q9BV44 507 aaKnown RBP10.13□□□□□ -0.79
FRG1-201ENST00000226798 LAT2Q9GZY6 243 aa10.13□□□□□ -0.79
FRG1-201ENST00000226798 FKRPQ9H9S5 495 aa10.13□□□□□ -0.79
FRG1-201ENST00000226798 PSMC3IPQ9P2W1 217 aaPredicted RBP10.13□□□□□ -0.79
FRG1-201ENST00000226798 KCNE5Q9UJ90 142 aa10.13□□□□□ -0.79
FRG1-201ENST00000226798 FAF1Q9UNN5 650 aaPredicted RBP10.13□□□□□ -0.79
FRG1-201ENST00000226798 PMF1-BGLAPU3KQ54 211 aa10.13□□□□□ -0.79
FRG1-201ENST00000226798 TRRAPQ9Y4A5 3859 aa10.12□□□□□ -0.79
FRG1-201ENST00000226798 ATP6V1G2-DDX39BF2Z307 99 aa10.12□□□□□ -0.79
FRG1-201ENST00000226798 J3QL48 77 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms