RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 CD180Q99467 661 aa12.13□□□□□ -0.47
CTNS-201ENST00000046640 TEX12Q9BXU0 123 aa12.13□□□□□ -0.47
CTNS-201ENST00000046640 TNFRSF10DQ9UBN6 386 aa12.13□□□□□ -0.47
CTNS-201ENST00000046640 CDH10Q9Y6N8 788 aa12.13□□□□□ -0.47
CTNS-201ENST00000046640 LRRN3E7EW58 273 aa12.13□□□□□ -0.47
CTNS-201ENST00000046640 MAGEB4O15481 346 aaPredicted RBP12.13□□□□□ -0.47
CTNS-201ENST00000046640 KLF4O43474 513 aa12.13□□□□□ -0.47
CTNS-201ENST00000046640 HCN1O60741 890 aa12.13□□□□□ -0.47
CTNS-201ENST00000046640 BMP7P18075 431 aa12.13□□□□□ -0.47
CTNS-201ENST00000046640 NOS3P29474 1203 aa12.13□□□□□ -0.47
CTNS-201ENST00000046640 EMDP50402 254 aa12.13□□□□□ -0.47
CTNS-201ENST00000046640 POU6F2P78424 691 aaPredicted RBP12.13□□□□□ -0.47
CTNS-201ENST00000046640 MGAT2Q10469 447 aa12.13□□□□□ -0.47
CTNS-201ENST00000046640 FZD2Q14332 565 aa12.13□□□□□ -0.47
CTNS-201ENST00000046640 GPR176Q14439 515 aa12.13□□□□□ -0.47
CTNS-201ENST00000046640 FCN2Q15485 313 aa12.13□□□□□ -0.47
CTNS-201ENST00000046640 RAB30Q15771 203 aa12.13□□□□□ -0.47
CTNS-201ENST00000046640 EOGTQ5NDL2 527 aa12.13□□□□□ -0.47
CTNS-201ENST00000046640 LAMTOR1Q6IAA8 161 aa12.13□□□□□ -0.47
CTNS-201ENST00000046640 RPTNQ6XPR3 784 aa12.13□□□□□ -0.47
CTNS-201ENST00000046640 OOSP2Q86WS3 158 aa12.13□□□□□ -0.47
CTNS-201ENST00000046640 SAMD14Q8IZD0 417 aaPredicted RBP12.13□□□□□ -0.47
CTNS-201ENST00000046640 SLC38A6Q8IZM9 456 aa12.13□□□□□ -0.47
CTNS-201ENST00000046640 CDRT4Q8N9R6 151 aa12.13□□□□□ -0.47
CTNS-201ENST00000046640 BEST4Q8NFU0 473 aa12.13□□□□□ -0.47
CTNS-201ENST00000046640 OR10H4Q8NGA5 316 aa12.13□□□□□ -0.47
CTNS-201ENST00000046640 OR6C4Q8NGE1 309 aa12.13□□□□□ -0.47
CTNS-201ENST00000046640 OR51L1Q8NGJ5 315 aa12.13□□□□□ -0.47
CTNS-201ENST00000046640 GPBAR1Q8TDU6 330 aa12.13□□□□□ -0.47
CTNS-201ENST00000046640 ASB12Q8WXK4 309 aa12.13□□□□□ -0.47
CTNS-201ENST00000046640 RFKQ969G6 155 aa12.13□□□□□ -0.47
CTNS-201ENST00000046640 BPIFA2Q96DR5 249 aa12.13□□□□□ -0.47
CTNS-201ENST00000046640 GSDMCQ9BYG8 508 aa12.13□□□□□ -0.47
CTNS-201ENST00000046640 LRRN3Q9H3W5 708 aa12.13□□□□□ -0.47
CTNS-201ENST00000046640 CDCP1Q9H5V8 836 aa12.13□□□□□ -0.47
CTNS-201ENST00000046640 ALPK2Q86TB3 2170 aa12.13□□□□□ -0.47
CTNS-201ENST00000046640 A0A0B4J203 849 aa12.12□□□□□ -0.47
CTNS-201ENST00000046640 AGR2O95994 175 aa12.12□□□□□ -0.47
CTNS-201ENST00000046640 ATP1B1P05026 303 aa12.12□□□□□ -0.47
CTNS-201ENST00000046640 EIF4EP06730 217 aaKnown RBP12.12□□□□□ -0.47
CTNS-201ENST00000046640 DBIP07108 87 aaKnown RBP12.12□□□□□ -0.47
CTNS-201ENST00000046640 POU3F3P20264 500 aaPredicted RBP12.12□□□□□ -0.47
CTNS-201ENST00000046640 PAICSP22234 425 aaKnown RBP12.12□□□□□ -0.47
CTNS-201ENST00000046640 IGFBP4P22692 258 aa12.12□□□□□ -0.47
CTNS-201ENST00000046640 ACVR1BP36896 505 aa12.12□□□□□ -0.47
CTNS-201ENST00000046640 GXYLT1Q4G148 440 aa12.12□□□□□ -0.47
CTNS-201ENST00000046640 MZT2AQ6P582 158 aa12.12□□□□□ -0.47
CTNS-201ENST00000046640 TMEM99Q8N816 258 aa12.12□□□□□ -0.47
CTNS-201ENST00000046640 ZDHHC1Q8WTX9 485 aa12.12□□□□□ -0.47
CTNS-201ENST00000046640 RELTQ969Z4 430 aa12.12□□□□□ -0.47
CTNS-201ENST00000046640 MED18Q9BUE0 208 aa12.12□□□□□ -0.47
CTNS-201ENST00000046640 ABCG5Q9H222 651 aa12.12□□□□□ -0.47
CTNS-201ENST00000046640 NTMQ9P121 344 aa12.12□□□□□ -0.47
CTNS-201ENST00000046640 VPS13AQ96RL7 3174 aa12.12□□□□□ -0.47
CTNS-201ENST00000046640 A0A0A6YYJ9 748 aa12.12□□□□□ -0.47
CTNS-201ENST00000046640 LOC105371267A0A1B0GV96 52 aa12.12□□□□□ -0.47
CTNS-201ENST00000046640 TGFBR3LH3BV60 316 aa12.12□□□□□ -0.47
CTNS-201ENST00000046640 CBX7O95931 251 aa12.12□□□□□ -0.47
CTNS-201ENST00000046640 TFPIP10646 304 aa12.12□□□□□ -0.47
CTNS-201ENST00000046640 OR3A3P47888 321 aa12.12□□□□□ -0.47
CTNS-201ENST00000046640 HCCSP53701 268 aa12.12□□□□□ -0.47
CTNS-201ENST00000046640 CLDN20P56880 219 aa12.12□□□□□ -0.47
CTNS-201ENST00000046640 YPEL5P62699 121 aa12.12□□□□□ -0.47
CTNS-201ENST00000046640 UBE2IP63279 158 aaKnown RBP12.12□□□□□ -0.47
CTNS-201ENST00000046640 MAB21L1Q13394 359 aa12.12□□□□□ -0.47
CTNS-201ENST00000046640 DSG2Q14126 1118 aa12.12□□□□□ -0.47
CTNS-201ENST00000046640 FAM53BQ14153 422 aa12.12□□□□□ -0.47
CTNS-201ENST00000046640 ZNF267Q14586 743 aaPredicted RBP12.12□□□□□ -0.47
CTNS-201ENST00000046640 RNLSQ5VYX0 342 aa12.12□□□□□ -0.47
CTNS-201ENST00000046640 MRGPREQ86SM8 312 aa12.12□□□□□ -0.47
CTNS-201ENST00000046640 TCTE3Q8IZS6 198 aa12.12□□□□□ -0.47
CTNS-201ENST00000046640 ZNF655Q8N720 491 aaPredicted RBP12.12□□□□□ -0.47
CTNS-201ENST00000046640 ARIH2OSQ8N7S6 290 aa12.12□□□□□ -0.47
CTNS-201ENST00000046640 SPACA7Q96KW9 195 aa12.12□□□□□ -0.47
CTNS-201ENST00000046640 HS6ST2Q96MM7 605 aa12.12□□□□□ -0.47
CTNS-201ENST00000046640 GON7Q9BXV9 100 aa12.12□□□□□ -0.47
CTNS-201ENST00000046640 LYRM4Q9HD34 91 aa12.12□□□□□ -0.47
CTNS-201ENST00000046640 MEPEQ9NQ76 525 aaPredicted RBP12.12□□□□□ -0.47
CTNS-201ENST00000046640 ENAMQ9NRM1 1142 aa12.12□□□□□ -0.47
CTNS-201ENST00000046640 POT1Q9NUX5 634 aa12.12□□□□□ -0.47
CTNS-201ENST00000046640 MMP17Q9ULZ9 603 aa12.12□□□□□ -0.47
CTNS-201ENST00000046640 E9PI62 339 aa12.12□□□□□ -0.47
CTNS-201ENST00000046640 PRAMEF26H0Y7S4 382 aa12.12□□□□□ -0.47
CTNS-201ENST00000046640 GMFGO60234 142 aa12.12□□□□□ -0.47
CTNS-201ENST00000046640 SERPINI2O75830 405 aa12.12□□□□□ -0.47
CTNS-201ENST00000046640 SCO1O75880 301 aa12.12□□□□□ -0.47
CTNS-201ENST00000046640 IGKV1D-16P01601 117 aa12.12□□□□□ -0.47
CTNS-201ENST00000046640 C1QBP02746 253 aa12.12□□□□□ -0.47
CTNS-201ENST00000046640 MAOAP21397 527 aa12.12□□□□□ -0.47
CTNS-201ENST00000046640 FGF9P31371 208 aaPredicted RBP12.12□□□□□ -0.47
CTNS-201ENST00000046640 RABIFP47224 123 aa12.12□□□□□ -0.47
CTNS-201ENST00000046640 STX4Q12846 297 aa12.12□□□□□ -0.47
CTNS-201ENST00000046640 SF3A2Q15428 464 aaKnown RBP12.12□□□□□ -0.47
CTNS-201ENST00000046640 EIPR1Q53HC9 387 aa12.12□□□□□ -0.47
CTNS-201ENST00000046640 VASNQ6EMK4 673 aa12.12□□□□□ -0.47
CTNS-201ENST00000046640 PRR23CQ6ZRP0 262 aa12.12□□□□□ -0.47
CTNS-201ENST00000046640 ESPNLQ6ZVH7 1005 aa12.12□□□□□ -0.47
CTNS-201ENST00000046640 GPR135Q8IZ08 494 aa12.12□□□□□ -0.47
CTNS-201ENST00000046640 GATSQ8NAP1 163 aa12.12□□□□□ -0.47
CTNS-201ENST00000046640 OR52L1Q8NGH7 329 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms