RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Tmem107Q9CPV0 140 aa9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Cxxc1Q9CWW7 660 aa9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Sapcd1Q9CY86 146 aa9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Fam69aQ9D6I7 428 aa9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Aurkaip1Q9DCJ7 200 aa9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Prokr1Q9JKL1 393 aa9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Pde7bQ9QXQ1 446 aa9.11□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Gm21936A0A1Y7VJE9 144 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 4930426L09RikE9Q0N7 123 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 4930523C07RikE9Q2T4 99 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Ndufb11O09111 151 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Ech1O35459 327 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Ldb2O55203 373 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 P06324 132 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Il6P08505 211 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Hoxa5P09021 270 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Hoxb5P09079 269 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Cdx1P18111 268 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Rab24P35290 203 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Cap1P40124 474 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 PitpnaP53810 271 aaKnown RBP9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Gabrr2P56476 465 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Rasd2P63032 266 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Sec1P97353 368 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Sox14Q04892 240 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Dhrs2Q149L0 282 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Nlrc3Q5DU56 1064 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Olfr146Q60884 306 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Scarb1Q61009 509 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 MafkQ61827 156 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Fam189a1Q6A044 515 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Nudt16Q6P3D0 195 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 ApoolQ78IK4 265 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Kansl1Q80TG1 1036 aaKnown RBP9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Lrrc39Q8BGI7 337 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Gprc5aQ8BHL4 356 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 E330021D16RikQ8BW45 371 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Fgd2Q8BY35 655 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Lats1Q8BYR2 1129 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Aimp2Q8R010 320 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Slc25a28Q8R0Z5 364 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Cox18Q8VC74 331 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Mrps23Q8VE22 177 aaKnown RBP9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Olfr1277Q8VF41 303 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Snx18Q91ZR2 614 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Exosc4Q921I9 245 aaKnown RBP9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Mrpl49Q9CQ40 166 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Slc25a30Q9CR58 291 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Hddc3Q9D114 179 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Cers4Q9D6J1 393 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Tmigd1Q9D7L8 261 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Fgf16Q9ESL8 207 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Adam26aQ9R158 697 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Gm12355A2A4X6 163 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Gm5938A2AEN9 163 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 4930444G20RikD3Z741 495 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Btbd2E9PUS2 523 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Olfr592E9PYB3 312 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Gm9972E9Q053 102 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Vmn2r115E9Q0E7 857 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Gm5798F7BTS7 198 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Vmn2r99H3BK37 856 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Gm8660K7N6J2 305 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Vmn1r115K7N6Y3 295 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Prdx6O08709 224 aaKnown RBP9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Gjd2O54851 321 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Camk2aP11798 478 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Pmp22P16646 161 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Prdx3P20108 257 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Capza1P47753 286 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Srsf3P84104 164 aaKnown RBP9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Atp1b3P97370 278 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Agbl5Q09M02 886 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Tmem231Q3U284 315 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Guk1Q64520 198 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Olfr1026Q7TR90 307 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Olfr728Q7TRM6 311 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Zfp101Q8BP18 612 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Hmgcs1Q8JZK9 520 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 B3gnt7Q8K0J2 397 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Spp2Q8K1I3 203 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Vopp1Q8R1C3 172 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Wasf3Q8VHI6 501 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Uts2rQ8VIH9 385 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Dus3lQ91XI1 637 aaKnown RBP9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Wdr77Q99J09 342 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Fam210bQ9D8B6 190 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Mfsd4b2Q9D8I5 366 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Jmjd6Q9ERI5 403 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Kcnd3Q9Z0V1 655 aa9.1□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Gm29797A0A140LIA7 188 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Mindy4b-psA0A1W2P7H6 457 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Amy2a1E9PV85 245 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Vmn2r83E9Q0G7 864 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Wsb1O54927 421 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 MosP00536 390 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Cbr2P08074 244 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Wnt3P17553 355 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Slc11a2P49282 568 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Hsd11b1P50172 292 aa9.09□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 44 ms