RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Tgm4Q8BZH1 670 aa8.4□□□□□ -1.06
Clcn3-202ENSMUST00000056508 Vmn1r36Q8R2E3 305 aa8.4□□□□□ -1.06
Clcn3-202ENSMUST00000056508 Olfr1260Q8VGN9 310 aa8.4□□□□□ -1.06
Clcn3-202ENSMUST00000056508 Ppp1r3gQ9CW07 347 aa8.4□□□□□ -1.06
Clcn3-202ENSMUST00000056508 Cuedc2Q9CXX9 284 aa8.4□□□□□ -1.06
Clcn3-202ENSMUST00000056508 Alg14Q9D081 217 aa8.4□□□□□ -1.06
Clcn3-202ENSMUST00000056508 Asb5Q9D1A4 329 aa8.4□□□□□ -1.06
Clcn3-202ENSMUST00000056508 Ctag2Q9D9S4 219 aa8.4□□□□□ -1.06
Clcn3-202ENSMUST00000056508 Abcb11Q9QY30 1321 aa8.4□□□□□ -1.06
Clcn3-202ENSMUST00000056508 Gm30302A0A1Y7VN40 1110 aa8.4□□□□□ -1.06
Clcn3-202ENSMUST00000056508 Dgat2l6A2ADU8 337 aa8.4□□□□□ -1.06
Clcn3-202ENSMUST00000056508 Gm15440D3Z3P4 90 aa8.4□□□□□ -1.06
Clcn3-202ENSMUST00000056508 Olfr747E9PXH6 313 aa8.4□□□□□ -1.06
Clcn3-202ENSMUST00000056508 Mmp10O55123 476 aa8.4□□□□□ -1.06
Clcn3-202ENSMUST00000056508 Nipsnap2O55126 281 aa8.4□□□□□ -1.06
Clcn3-202ENSMUST00000056508 Pim3P58750 326 aa8.4□□□□□ -1.06
Clcn3-202ENSMUST00000056508 UbqlnlQ14DL0 610 aa8.4□□□□□ -1.06
Clcn3-202ENSMUST00000056508 Gm648Q3UJ22 213 aa8.4□□□□□ -1.06
Clcn3-202ENSMUST00000056508 C8bQ8BH35 589 aa8.4□□□□□ -1.06
Clcn3-202ENSMUST00000056508 Slc35c1Q8BLX4 363 aa8.4□□□□□ -1.06
Clcn3-202ENSMUST00000056508 Lrrc56Q8K375 552 aa8.4□□□□□ -1.06
Clcn3-202ENSMUST00000056508 Prss45Q8K4I7 317 aa8.4□□□□□ -1.06
Clcn3-202ENSMUST00000056508 Rab11fip5Q8R361 645 aa8.4□□□□□ -1.06
Clcn3-202ENSMUST00000056508 Cadm3Q99N28 396 aa8.4□□□□□ -1.06
Clcn3-202ENSMUST00000056508 Ube2v2Q9D2M8 145 aa8.4□□□□□ -1.06
Clcn3-202ENSMUST00000056508 Atg101Q9D8Z6 218 aa8.4□□□□□ -1.06
Clcn3-202ENSMUST00000056508 Scp2d1Q9DAH1 156 aa8.4□□□□□ -1.06
Clcn3-202ENSMUST00000056508 Kiaa1324A2AFS3 1009 aa8.4□□□□□ -1.06
Clcn3-202ENSMUST00000056508 Ceacam3E9Q6J4 706 aa8.4□□□□□ -1.06
Clcn3-202ENSMUST00000056508 Gm8909G3UXE9 396 aa8.4□□□□□ -1.06
Clcn3-202ENSMUST00000056508 Dlx2P40764 332 aa8.4□□□□□ -1.06
Clcn3-202ENSMUST00000056508 Slc7a15Q50E62 488 aa8.4□□□□□ -1.06
Clcn3-202ENSMUST00000056508 Il20raQ6PHB0 546 aa8.4□□□□□ -1.06
Clcn3-202ENSMUST00000056508 Abhd16bQ80YU0 474 aa8.4□□□□□ -1.06
Clcn3-202ENSMUST00000056508 Pcolce2Q8R4W6 414 aa8.4□□□□□ -1.06
Clcn3-202ENSMUST00000056508 Olfr1195Q8VG21 308 aa8.4□□□□□ -1.06
Clcn3-202ENSMUST00000056508 Olfr345Q8VGK4 311 aa8.4□□□□□ -1.06
Clcn3-202ENSMUST00000056508 Hdac8Q8VH37 377 aa8.4□□□□□ -1.06
Clcn3-202ENSMUST00000056508 Abcg5Q99PE8 652 aa8.4□□□□□ -1.06
Clcn3-202ENSMUST00000056508 Pkp2Q9CQ73 795 aaKnown RBP8.4□□□□□ -1.06
Clcn3-202ENSMUST00000056508 Wbp2nlQ9D529 359 aa8.4□□□□□ -1.06
Clcn3-202ENSMUST00000056508 Vmn1r46Q9EQ45 309 aa8.4□□□□□ -1.06
Clcn3-202ENSMUST00000056508 Gm26920S4R2A5 56 aa8.4□□□□□ -1.06
Clcn3-202ENSMUST00000056508 Aif1O70200 147 aa8.4□□□□□ -1.07
Clcn3-202ENSMUST00000056508 LcatP16301 438 aa8.4□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Map2k4P47809 397 aa8.4□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Bpifa6Q0VGU8 367 aa8.4□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Cd300aQ6SJQ0 318 aa8.4□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Celf6Q7TN33 460 aaKnown RBP8.4□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Cd99l2Q8BIF0 237 aa8.4□□□□□ -1.07
Clcn3-202ENSMUST00000056508 SccpdhQ8R127 429 aa8.4□□□□□ -1.07
Clcn3-202ENSMUST00000056508 B3gnt9Q8VI16 399 aa8.4□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Rbms1Q91W59 403 aaKnown RBP8.4□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Zfp64Q99KE8 643 aa8.4□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Pam16Q9CQV1 125 aa8.4□□□□□ -1.07
Clcn3-202ENSMUST00000056508 PclafQ9CQX4 110 aaKnown RBP8.4□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Q9DAE8 263 aa8.4□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Gstk1Q9DCM2 226 aa8.4□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Spint2Q9WU03 252 aa8.4□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Gm45692D3Z0A0 150 aa8.4□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Vmn1r129E9QA94 307 aa8.4□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Gm8720K9J7F4 307 aa8.4□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Bmp4P21275 408 aa8.4□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Atf1P81269 269 aaKnown RBP8.4□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Ctdnep1Q3TP92 244 aa8.4□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Clcn4Q61418 747 aa8.4□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Mfsd4aQ6PDC8 510 aa8.4□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Ttll4Q80UG8 1193 aa8.4□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Kcmf1Q80UY2 381 aa8.4□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Sp8Q8BMJ8 486 aa8.4□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Plekha1Q8BUL6 383 aa8.4□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Fbxl8Q8CIG9 374 aa8.4□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Rnf183Q8QZS5 190 aa8.4□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Olfr1484Q8VEU6 315 aa8.4□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Olfr771Q8VFH6 317 aa8.4□□□□□ -1.07
Clcn3-202ENSMUST00000056508 OptcQ920A0 328 aa8.4□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Tnfaip8l2Q9D8Y7 184 aa8.4□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Ssr3Q9DCF9 185 aa8.4□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Jph1Q9ET80 660 aa8.4□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Serinc1Q9QZI8 453 aa8.4□□□□□ -1.07
Clcn3-202ENSMUST00000056508 PrxO55103 1391 aa8.4□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Zmym3Q9JLM4 1370 aa8.4□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Zfp979A2A799 407 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Vmn2r24D3YUI0 854 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Olfr608E9Q564 316 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Vmn2r15L7N2A0 855 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Glp1rO35659 463 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Slc11a1P41251 548 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Rpl5P47962 297 aaKnown RBP8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Ube2mP61082 183 aaKnown RBP8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 PilrbQ2YFS2 224 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Olfr774Q7TRI5 312 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Efcab3Q80X60 432 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Rxfp3Q8BGE9 472 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Snx22Q8C084 192 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Gtf2f2Q8R0A0 249 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Tmem82Q8R115 356 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Prrg2Q8R182 198 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Olfr54Q8VFE6 313 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Olfr586Q8VH13 317 aa8.39□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 51.1 ms