RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 IsxA1A546 240 aa15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Hnf1aP22361 628 aa15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Ska3Q8C263 411 aa15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Fam199xQ8K2D0 388 aa15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Glyr1Q922P9 546 aaKnown RBP15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 AassQ99K67 926 aa15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 4930578G10RikQ9D4Q4 153 aa15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Dlgap4B1AZP2 992 aa15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Znf551B2RUI1 696 aa15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Vmn1r77E9PY60 306 aa15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Sox3P53784 375 aa15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Ugt2b36Q3UEP4 530 aa15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 DbpQ60925 325 aa15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Heatr6Q6P1G0 1184 aaKnown RBP15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Gpr119Q7TQP3 335 aa15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Olfr1162Q7TR28 314 aa15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Gpr62Q80UC6 358 aa15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Faap24Q8BHL6 221 aa15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Galnt11Q921L8 608 aa15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Tlr1Q9EPQ1 795 aa15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Trav15d-1-dv6d-1A0A075B624 124 aa15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Olfr68E9PYY2 315 aa15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Q3USZ8 430 aa15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Grm7Q68ED2 915 aa15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Cdc42ep3Q9CQC5 254 aa15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Cby1Q9D1C2 127 aa15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Olfr948Q9EQ95 321 aa15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Gstm6O35660 218 aa15.67■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Vmn1r84Q8R284 318 aa15.67■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Tmem176bQ9R1Q6 263 aa15.67■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Rpl13a-ps1A0A140T8K2 203 aaKnown RBP15.67■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Tfap2cQ61312 449 aa15.67■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Commd9Q8K2Q0 198 aa15.67■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Olfr1504Q8VFQ4 315 aa15.67■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Aldh7a1Q9DBF1 539 aa15.67■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Heatr5bQ8C547 2070 aa15.67■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Olfr1432A0A140LHS7 346 aa15.67■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Gm20390E9PZF0 267 aa15.67■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Olfr891E9Q843 316 aa15.67■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Srsf5O35326 269 aaKnown RBP15.67■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Pou3f4P62515 361 aa15.67■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 PigaQ64323 485 aa15.67■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Abhd18Q8C1A9 464 aa15.67■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Vmn1r198Q8R263 300 aa15.67■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Lactb2Q99KR3 288 aa15.67■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Wdr53Q9DB94 358 aa15.67■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 IvdQ9JHI5 424 aa15.67■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Tdp2Q9JJX7 370 aa15.67■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Lrp6O88572 1613 aa15.67■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Aldoart2A6ZI47 364 aa15.67■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 BlkP16277 499 aa15.67■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Aqp2P56402 271 aa15.67■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Mansc4Q3UU94 337 aa15.67■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Arrdc3Q7TPQ9 414 aa15.67■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Tmem202Q80W35 275 aa15.67■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Cnot4Q8BT14 575 aaKnown RBP15.67■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Il34Q8R1R4 235 aa15.67■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Olfr518Q8VEW1 333 aa15.67■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Olfr800Q8VFH7 311 aa15.67■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 DcxrQ91X52 244 aa15.67■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Lnx2Q91XL2 687 aa15.67■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Alyref2Q9JJW6 218 aa15.67■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Olfr740E9PV79 311 aa15.67■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Gm11236J3QMS7 360 aa15.67■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Hexim2Q3TVI4 313 aa15.67■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 MaoaQ64133 526 aa15.67■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Cldn34b3Q80ZS5 209 aa15.67■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 MmaaQ8C7H1 415 aa15.67■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Med17Q8VCD5 649 aaKnown RBP15.67■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 TapbplQ8VD31 451 aa15.67■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Ankrd54Q91WK7 299 aa15.67■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Vmn1r172Q9EPS4 313 aa15.67■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Wdr18Q4VBE8 431 aa15.67■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Slc35a1Q61420 336 aa15.67■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Ifna15Q61718 190 aa15.67■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Med16Q6PGF3 828 aa15.67■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Zcchc10Q9CX48 178 aa15.67■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Vmn2r92L7N2A4 860 aa15.67■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Milr1Q3TB92 246 aa15.67■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Dvl2Q60838 736 aa15.67■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 SynprQ8BGN8 265 aa15.67■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Zbtb37Q8C3U9 504 aa15.67■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Olfr799Q8VGI7 311 aa15.67■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Twsg1Q9EP52 222 aa15.67■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Sh3bgrlQ9JJU8 114 aaKnown RBP15.67■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Rps26P62855 115 aaKnown RBP15.66■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Enpp7D3Z6V6 446 aa15.66■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Olfr610E9Q598 315 aa15.66■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Drd2P61168 444 aa15.66■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Olfr1148Q7TR35 314 aa15.66■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Olfr53Q8VGL8 312 aa15.66■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Vmn1r40Q9EQ46 310 aa15.66■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Rasal1Q9Z268 799 aa15.66■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Olfr225E9PWF9 419 aa15.66■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Nlrp12E9Q5R7 1054 aa15.66■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 GcP21614 476 aa15.66■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Lrg1Q91XL1 342 aa15.66■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 PsphQ99LS3 225 aa15.66■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Cts8Q9JI81 333 aa15.66■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Syngr4Q9Z1L2 233 aa15.66■□□□□ 0.1
Retrieved 100 of 22,080 RNA–protein pairs in 28.1 ms