RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Spred2Q924S7 410 aa12.51□□□□□ -0.41
Nup88-201ENSMUST00000035283 Dmac2Q9D7K5 258 aaKnown RBP12.51□□□□□ -0.41
Nup88-201ENSMUST00000035283 Alg5Q9DB25 324 aa12.51□□□□□ -0.41
Nup88-201ENSMUST00000035283 P2ry14Q9ESG6 338 aa12.51□□□□□ -0.41
Nup88-201ENSMUST00000035283 Cts6Q9ET52 334 aa12.51□□□□□ -0.41
Nup88-201ENSMUST00000035283 Tas2r103Q9JKA3 312 aa12.51□□□□□ -0.41
Nup88-201ENSMUST00000035283 Ybx2Q9Z2C8 360 aaKnown RBP12.51□□□□□ -0.41
Nup88-201ENSMUST00000035283 1110002E22RikE0CYV9 1786 aa12.51□□□□□ -0.41
Nup88-201ENSMUST00000035283 Rasgef1aA0A0N4SVR5 498 aa12.51□□□□□ -0.41
Nup88-201ENSMUST00000035283 Olfr1025-ps1A0A140T8K3 312 aa12.51□□□□□ -0.41
Nup88-201ENSMUST00000035283 Rnf39A2RT81 352 aa12.51□□□□□ -0.41
Nup88-201ENSMUST00000035283 Amd2D3Z6H8 334 aa12.51□□□□□ -0.41
Nup88-201ENSMUST00000035283 Arl9F7BE40 171 aa12.51□□□□□ -0.41
Nup88-201ENSMUST00000035283 Mesp2O08574 370 aa12.51□□□□□ -0.41
Nup88-201ENSMUST00000035283 ComtO88587 265 aa12.51□□□□□ -0.41
Nup88-201ENSMUST00000035283 Mtnd3P03899 115 aa12.51□□□□□ -0.41
Nup88-201ENSMUST00000035283 ArafP04627 604 aa12.51□□□□□ -0.41
Nup88-201ENSMUST00000035283 SnrpbP27048 231 aaKnown RBP12.51□□□□□ -0.41
Nup88-201ENSMUST00000035283 Tbx1P70323 479 aa12.51□□□□□ -0.41
Nup88-201ENSMUST00000035283 UrodP70697 367 aa12.51□□□□□ -0.41
Nup88-201ENSMUST00000035283 Sox9Q04887 507 aa12.51□□□□□ -0.41
Nup88-201ENSMUST00000035283 Xkr7Q5GH64 580 aa12.51□□□□□ -0.41
Nup88-201ENSMUST00000035283 RflnbQ5SVD0 216 aa12.51□□□□□ -0.41
Nup88-201ENSMUST00000035283 Tnfaip3Q60769 775 aa12.51□□□□□ -0.41
Nup88-201ENSMUST00000035283 Camk2dQ6PHZ2 499 aa12.51□□□□□ -0.41
Nup88-201ENSMUST00000035283 Trmt12Q8BG71 446 aa12.51□□□□□ -0.41
Nup88-201ENSMUST00000035283 Slc9a7Q8BLV3 726 aa12.51□□□□□ -0.41
Nup88-201ENSMUST00000035283 Eif4e2Q8BMB3 245 aaKnown RBP12.51□□□□□ -0.41
Nup88-201ENSMUST00000035283 Klhl12Q8BZM0 568 aa12.51□□□□□ -0.41
Nup88-201ENSMUST00000035283 Clec4a3Q8JZX6 237 aa12.51□□□□□ -0.41
Nup88-201ENSMUST00000035283 Olfr1426Q8VG74 311 aa12.51□□□□□ -0.41
Nup88-201ENSMUST00000035283 PnpoQ91XF0 261 aa12.51□□□□□ -0.41
Nup88-201ENSMUST00000035283 Cwh43Q91YL7 699 aa12.51□□□□□ -0.41
Nup88-201ENSMUST00000035283 Hint3Q9CPS6 165 aa12.51□□□□□ -0.41
Nup88-201ENSMUST00000035283 Nkiras2Q9CR56 191 aa12.51□□□□□ -0.41
Nup88-201ENSMUST00000035283 Necab3Q9D6J4 353 aa12.51□□□□□ -0.41
Nup88-201ENSMUST00000035283 Fank1Q9DAM9 344 aa12.51□□□□□ -0.41
Nup88-201ENSMUST00000035283 Habp4Q9JKS5 411 aaKnown RBP12.51□□□□□ -0.41
Nup88-201ENSMUST00000035283 PtgesQ9JM51 153 aa12.51□□□□□ -0.41
Nup88-201ENSMUST00000035283 Gstz1Q9WVL0 216 aa12.51□□□□□ -0.41
Nup88-201ENSMUST00000035283 Slc7a5Q9Z127 512 aa12.51□□□□□ -0.41
Nup88-201ENSMUST00000035283 SvaE9PX96 165 aa12.5□□□□□ -0.41
Nup88-201ENSMUST00000035283 Aldh3b2E9Q3E1 479 aa12.5□□□□□ -0.41
Nup88-201ENSMUST00000035283 5830473C10RikF8VQ07 620 aa12.5□□□□□ -0.41
Nup88-201ENSMUST00000035283 9330182O14RikJ3QNB2 140 aa12.5□□□□□ -0.41
Nup88-201ENSMUST00000035283 FxnO35943 207 aa12.5□□□□□ -0.41
Nup88-201ENSMUST00000035283 Apoa2P09813 102 aa12.5□□□□□ -0.41
Nup88-201ENSMUST00000035283 Il1bP10749 269 aa12.5□□□□□ -0.41
Nup88-201ENSMUST00000035283 Acp2P24638 423 aa12.5□□□□□ -0.41
Nup88-201ENSMUST00000035283 Gna13P27601 377 aa12.5□□□□□ -0.41
Nup88-201ENSMUST00000035283 Rps7P62082 194 aaKnown RBP12.5□□□□□ -0.41
Nup88-201ENSMUST00000035283 SnrpnP63163 240 aaKnown RBP12.5□□□□□ -0.41
Nup88-201ENSMUST00000035283 Fgf11P70378 225 aa12.5□□□□□ -0.41
Nup88-201ENSMUST00000035283 Rgs16P97428 201 aa12.5□□□□□ -0.41
Nup88-201ENSMUST00000035283 FcamrQ2TB54 535 aa12.5□□□□□ -0.41
Nup88-201ENSMUST00000035283 Wdr20Q3UWE6 569 aa12.5□□□□□ -0.41
Nup88-201ENSMUST00000035283 Taar7bQ5QD11 358 aa12.5□□□□□ -0.41
Nup88-201ENSMUST00000035283 Slc6a7Q6PGE7 637 aa12.5□□□□□ -0.41
Nup88-201ENSMUST00000035283 Olfr645Q7TRQ1 315 aa12.5□□□□□ -0.41
Nup88-201ENSMUST00000035283 Zfp189Q8BKP2 608 aa12.5□□□□□ -0.41
Nup88-201ENSMUST00000035283 Leng9Q8BTN6 485 aa12.5□□□□□ -0.41
Nup88-201ENSMUST00000035283 Trmt6Q8CE96 497 aa12.5□□□□□ -0.41
Nup88-201ENSMUST00000035283 Slc43a2Q8CGA3 568 aa12.5□□□□□ -0.41
Nup88-201ENSMUST00000035283 Q8R2K8 148 aa12.5□□□□□ -0.41
Nup88-201ENSMUST00000035283 Prdm9Q96EQ9 843 aa12.5□□□□□ -0.41
Nup88-201ENSMUST00000035283 Yaf2Q99LW6 179 aa12.5□□□□□ -0.41
Nup88-201ENSMUST00000035283 Sertad3Q9ERC3 197 aa12.5□□□□□ -0.41
Nup88-201ENSMUST00000035283 Spry1Q9QXV9 313 aa12.5□□□□□ -0.41
Nup88-201ENSMUST00000035283 Nr4a3Q9QZB6 627 aa12.5□□□□□ -0.41
Nup88-201ENSMUST00000035283 Dctn6Q9WUB4 190 aa12.5□□□□□ -0.41
Nup88-201ENSMUST00000035283 Stk25Q9Z2W1 426 aa12.5□□□□□ -0.41
Nup88-201ENSMUST00000035283 Trbv21A0A0A6YX06 97 aa12.5□□□□□ -0.41
Nup88-201ENSMUST00000035283 Trbv2A0A0B4J1G8 114 aa12.5□□□□□ -0.41
Nup88-201ENSMUST00000035283 Sp3O70494 783 aa12.5□□□□□ -0.41
Nup88-201ENSMUST00000035283 Upp1P52624 311 aa12.5□□□□□ -0.41
Nup88-201ENSMUST00000035283 Prss57Q14B24 284 aa12.5□□□□□ -0.41
Nup88-201ENSMUST00000035283 Scrn3Q3TMH2 418 aa12.5□□□□□ -0.41
Nup88-201ENSMUST00000035283 Ffar3Q3UFD7 319 aa12.5□□□□□ -0.41
Nup88-201ENSMUST00000035283 Ptp4a1Q63739 173 aa12.5□□□□□ -0.41
Nup88-201ENSMUST00000035283 Tmed3Q78IS1 221 aa12.5□□□□□ -0.41
Nup88-201ENSMUST00000035283 Olfr657Q7TRP7 319 aa12.5□□□□□ -0.41
Nup88-201ENSMUST00000035283 Acat3Q80X81 397 aa12.5□□□□□ -0.41
Nup88-201ENSMUST00000035283 GskipQ8BGR8 139 aa12.5□□□□□ -0.41
Nup88-201ENSMUST00000035283 Olfr769Q8K501 312 aa12.5□□□□□ -0.41
Nup88-201ENSMUST00000035283 Mptx1Q8R1M8 219 aa12.5□□□□□ -0.41
Nup88-201ENSMUST00000035283 Olfr160Q8VGE3 309 aa12.5□□□□□ -0.41
Nup88-201ENSMUST00000035283 Rpp25Q91WE3 199 aa12.5□□□□□ -0.41
Nup88-201ENSMUST00000035283 Med11Q9D8C6 117 aa12.5□□□□□ -0.41
Nup88-201ENSMUST00000035283 Prl8a8Q9DAS4 241 aa12.5□□□□□ -0.41
Nup88-201ENSMUST00000035283 Eif3kQ9DBZ5 218 aa12.5□□□□□ -0.41
Nup88-201ENSMUST00000035283 Abcb10Q9JI39 715 aa12.5□□□□□ -0.41
Nup88-201ENSMUST00000035283 Xpr1Q9Z0U0 695 aa12.5□□□□□ -0.41
Nup88-201ENSMUST00000035283 Thbs4Q9Z1T2 963 aa12.5□□□□□ -0.41
Nup88-201ENSMUST00000035283 Igkv18-36A0A075B5M9 114 aa12.49□□□□□ -0.41
Nup88-201ENSMUST00000035283 Zfp442A2AQA0 667 aa12.49□□□□□ -0.41
Nup88-201ENSMUST00000035283 GlsD3Z7P3 674 aa12.49□□□□□ -0.41
Nup88-201ENSMUST00000035283 Zfp395E9Q5N9 508 aa12.49□□□□□ -0.41
Nup88-201ENSMUST00000035283 Zfp994J3QM38 661 aa12.49□□□□□ -0.41
Nup88-201ENSMUST00000035283 H2-Q7P14429 334 aa12.49□□□□□ -0.41
Nup88-201ENSMUST00000035283 PrkcaP20444 672 aa12.49□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 56.6 ms