RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Ccdc3Q9D6Y1 273 aa15.7■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Abcd4O89016 606 aa15.7■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Zfp13P10754 512 aa15.7■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Serpina3cP29621 417 aa15.7■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Kcnk12Q76M80 430 aa15.7■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Scml4Q80VG1 408 aa15.7■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Nudt15Q8BG93 170 aa15.7■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Fbxo30Q8BJL1 746 aa15.7■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Sit1Q8C503 180 aa15.7■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Tmem5Q8VDX6 444 aa15.7■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Olfr380Q8VGT3 311 aa15.7■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Mrpl37Q921S7 423 aaKnown RBP15.7■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Tmem159Q922Z1 161 aa15.7■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Brix1Q9DCA5 353 aaKnown RBP15.7■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Fbxw28E9Q8A4 466 aa15.69■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Cd160O88875 185 aa15.69■□□□□ 0.1
Ctcf-201ENSMUST00000005841 LdhcP00342 332 aa15.69■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Stfa2P35174 103 aa15.69■□□□□ 0.1
Ctcf-201ENSMUST00000005841 P2rx1P51576 399 aa15.69■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Hrh3P58406 445 aa15.69■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Taar2Q5QD17 339 aa15.69■□□□□ 0.1
Ctcf-201ENSMUST00000005841 MertkQ60805 994 aa15.69■□□□□ 0.1
Ctcf-201ENSMUST00000005841 St6gal1Q64685 403 aa15.69■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Olfr645Q7TRQ1 315 aa15.69■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Dusp15Q8R4V2 235 aa15.69■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Olfr820Q8VFU5 312 aa15.69■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Olfr160Q8VGE3 309 aa15.69■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Olfr1494Q8VGP8 315 aa15.69■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Lcn8Q924P3 175 aa15.69■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Sgo1Q9CXH7 517 aa15.69■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Ptp4a3Q9D658 173 aa15.69■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Olfr2Q9QWU6 327 aa15.69■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Deaf1Q9Z1T5 566 aa15.69■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Slc25a34A2ADF7 318 aa15.69■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Gm8220F6YKI2 213 aa15.69■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Olfr657Q7TRP7 319 aa15.69■□□□□ 0.1
Ctcf-201ENSMUST00000005841 ClmQ7TSN2 230 aa15.69■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Dusp18Q8VE01 188 aa15.69■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Adat1Q9JHI2 499 aa15.69■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Khdrbs2Q9WU01 349 aa15.69■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Mtnd5P03921 607 aa15.69■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Tcrg-V1P06325 135 aa15.69■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Gabra1P62812 455 aa15.69■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Fam196aQ3USH1 422 aa15.69■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Ddhd2Q80Y98 699 aa15.69■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Zfp763Q8BIC7 588 aa15.69■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Smad3Q8BUN5 425 aa15.69■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Pramef8Q8CE24 480 aa15.69■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Gnpda2Q9CRC9 276 aa15.69■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Fam96aQ9DCL2 160 aa15.69■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Habp4Q9JKS5 411 aaKnown RBP15.69■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Ttc23lA6H6E9 458 aa15.68■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Olfr891E9Q843 316 aa15.68■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Cxcl2P10889 100 aa15.68■□□□□ 0.1
Ctcf-201ENSMUST00000005841 UoxP25688 303 aa15.68■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Doc2bP70169 412 aa15.68■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Trappc13Q3TIR1 417 aa15.68■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Taar7bQ5QD11 358 aa15.68■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Ppp2r1bQ7TNP2 601 aaKnown RBP15.68■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Prss34Q80UR4 318 aa15.68■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Znf784Q8BI69 297 aa15.68■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Bclaf1Q8K019 919 aaKnown RBP15.68■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Tor2aQ8R1J9 321 aa15.68■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Olfr1391Q8VFA4 311 aa15.68■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Olfr1043Q8VFK4 314 aa15.68■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Olfr551Q8VG23 315 aa15.68■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Pmepa1Q9D7R2 260 aa15.68■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Olfr110A2RT31 317 aa15.68■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Cdk5r2O35926 369 aa15.68■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Hoxb1P17919 297 aa15.68■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Cdh4P39038 913 aa15.68■□□□□ 0.1
Ctcf-201ENSMUST00000005841 MplQ08351 625 aa15.68■□□□□ 0.1
Ctcf-201ENSMUST00000005841 1700066B19RikQ3TS39 127 aa15.68■□□□□ 0.1
Ctcf-201ENSMUST00000005841 4930438A08RikQ5SPH3 536 aa15.68■□□□□ 0.1
Ctcf-201ENSMUST00000005841 PmlQ60953 885 aa15.68■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Olfr111Q7TRK1 317 aa15.68■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Poglut1Q8BYB9 392 aaKnown RBP15.68■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Laptm4bQ91XQ6 227 aa15.68■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Krt88Q9CPR6 171 aa15.68■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Slc15a1Q9JIP7 709 aa15.68■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Insm2Q9JMC2 493 aa15.68■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Unc80Q8BLN6 3261 aa15.68■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Skint10A7TZG1 354 aa15.67■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Gm9857F7CXR1 130 aa15.67■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Vmn2r69G3XA45 850 aa15.67■□□□□ 0.1
Ctcf-201ENSMUST00000005841 CremP27699 357 aa15.67■□□□□ 0.1
Ctcf-201ENSMUST00000005841 PitpnbP53811 271 aa15.67■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Ucp3P56501 308 aa15.67■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Csf2raQ00941 388 aa15.67■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Sox4Q06831 440 aa15.67■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Ndufb6Q3UIU2 128 aa15.67■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Gm5460Q3UQ97 254 aa15.67■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Ift52Q62559 426 aa15.67■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Hfe2Q7TQ32 420 aa15.67■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Bdh1Q80XN0 343 aa15.67■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Ube3dQ8BX13 368 aa15.67■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Wdr26Q8C6G8 641 aa15.67■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Med9Q8VCS6 142 aa15.67■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Olfr808Q8VGI8 312 aa15.67■□□□□ 0.1
Ctcf-201ENSMUST00000005841 NgrnQ99KS2 293 aaKnown RBP15.67■□□□□ 0.1
Retrieved 100 of 22,080 RNA–protein pairs in 25 ms